RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CCDC27Q2M243 656 aa14.54□□□□□ -0.08
SMCR8-201ENST00000406438 AEBP2Q6ZN18 517 aaPredicted RBP14.54□□□□□ -0.08
SMCR8-201ENST00000406438 MINK1Q8N4C8 1332 aaPredicted RBP14.53□□□□□ -0.08
SMCR8-201ENST00000406438 NUCB2P80303 420 aa14.53□□□□□ -0.08
SMCR8-201ENST00000406438 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
SMCR8-201ENST00000406438 RIPK4P57078 832 aa14.53□□□□□ -0.08
SMCR8-201ENST00000406438 API5Q9BZZ5 524 aaKnown RBP14.53□□□□□ -0.08
SMCR8-201ENST00000406438 HSP90B2PQ58FF3 399 aa14.53□□□□□ -0.08
SMCR8-201ENST00000406438 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
SMCR8-201ENST00000406438 COG6Q9Y2V7 657 aa14.53□□□□□ -0.08
SMCR8-201ENST00000406438 RIC3Q7Z5B4 369 aa14.52□□□□□ -0.09
SMCR8-201ENST00000406438 DCTN1Q14203 1278 aa14.52□□□□□ -0.09
SMCR8-201ENST00000406438 DZIP1LQ8IYY4 767 aaKnown RBP14.51□□□□□ -0.09
SMCR8-201ENST00000406438 IFT57Q9NWB7 429 aa14.51□□□□□ -0.09
SMCR8-201ENST00000406438 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.51□□□□□ -0.09
SMCR8-201ENST00000406438 ATF3P18847 181 aa14.51□□□□□ -0.09
SMCR8-201ENST00000406438 IKQ13123 557 aaPredicted RBP14.51□□□□□ -0.09
SMCR8-201ENST00000406438 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.51□□□□□ -0.09
SMCR8-201ENST00000406438 CCAR1Q8IX12 1150 aaKnown RBP14.51□□□□□ -0.09
SMCR8-201ENST00000406438 MAP7D2Q96T17 732 aa14.51□□□□□ -0.09
SMCR8-201ENST00000406438 FYB1O15117 783 aa14.51□□□□□ -0.09
SMCR8-201ENST00000406438 FOSBP53539 338 aa14.51□□□□□ -0.09
SMCR8-201ENST00000406438 CAGE1Q8TC20 777 aa14.51□□□□□ -0.09
SMCR8-201ENST00000406438 MNS1Q8NEH6 495 aa14.51□□□□□ -0.09
SMCR8-201ENST00000406438 TSPYL4Q9UJ04 414 aa14.51□□□□□ -0.09
SMCR8-201ENST00000406438 PSMA5P28066 241 aa14.5□□□□□ -0.09
SMCR8-201ENST00000406438 SART3Q15020 963 aaKnown RBP14.5□□□□□ -0.09
SMCR8-201ENST00000406438 TMEM132AQ24JP5 1023 aa14.5□□□□□ -0.09
SMCR8-201ENST00000406438 PAF1Q8N7H5 531 aa14.5□□□□□ -0.09
SMCR8-201ENST00000406438 TSHZ2Q9NRE2 1034 aa14.5□□□□□ -0.09
SMCR8-201ENST00000406438 SLC3A2P08195 630 aaKnown RBP14.49□□□□□ -0.09
SMCR8-201ENST00000406438 RAPGEF4Q8WZA2 1011 aa14.49□□□□□ -0.09
SMCR8-201ENST00000406438 WASHC4Q2M389 1173 aa14.48□□□□□ -0.09
SMCR8-201ENST00000406438 CNTROBQ8N137 903 aa14.48□□□□□ -0.09
SMCR8-201ENST00000406438 NEUROD6Q96NK8 337 aa14.48□□□□□ -0.09
SMCR8-201ENST00000406438 RUNDC1Q96C34 613 aa14.48□□□□□ -0.09
SMCR8-201ENST00000406438 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
SMCR8-201ENST00000406438 CHMP5Q9NZZ3 219 aa14.48□□□□□ -0.09
SMCR8-201ENST00000406438 SLC4A3P48751 1232 aa14.47□□□□□ -0.09
SMCR8-201ENST00000406438 PDILTQ8N807 584 aa14.47□□□□□ -0.09
SMCR8-201ENST00000406438 TXLNAP40222 546 aa14.47□□□□□ -0.09
SMCR8-201ENST00000406438 JPH4Q96JJ6 628 aa14.47□□□□□ -0.09
SMCR8-201ENST00000406438 CDK5RAP3Q96JB5 506 aa14.47□□□□□ -0.09
SMCR8-201ENST00000406438 KIF6Q6ZMV9 814 aa14.46□□□□□ -0.09
SMCR8-201ENST00000406438 CCDC191Q8NCU4 936 aa14.46□□□□□ -0.09
SMCR8-201ENST00000406438 SYCP1Q15431 976 aa14.46□□□□□ -0.09
SMCR8-201ENST00000406438 ZRSR2Q15696 482 aaKnown RBP14.46□□□□□ -0.09
SMCR8-201ENST00000406438 FAM13BQ9NYF5 915 aa14.46□□□□□ -0.09
SMCR8-201ENST00000406438 GNAI1P63096 354 aa14.46□□□□□ -0.1
SMCR8-201ENST00000406438 APAF1O14727 1248 aa14.46□□□□□ -0.1
SMCR8-201ENST00000406438 ERCC4Q92889 916 aaPredicted RBP14.45□□□□□ -0.1
SMCR8-201ENST00000406438 TBC1D2BQ9UPU7 963 aa14.45□□□□□ -0.1
SMCR8-201ENST00000406438 SDF4Q9BRK5 362 aa14.45□□□□□ -0.1
SMCR8-201ENST00000406438 SMG6Q86US8 1419 aaKnown RBP14.45□□□□□ -0.1
SMCR8-201ENST00000406438 LETM1O95202 739 aaPredicted RBP14.45□□□□□ -0.1
SMCR8-201ENST00000406438 SMARCE1Q969G3 411 aa14.45□□□□□ -0.1
SMCR8-201ENST00000406438 MAGEC2Q9UBF1 373 aaPredicted RBP14.45□□□□□ -0.1
SMCR8-201ENST00000406438 UBTFL1P0CB47 393 aaPredicted RBP14.44□□□□□ -0.1
SMCR8-201ENST00000406438 CWC15Q9P013 229 aaKnown RBP14.44□□□□□ -0.1
SMCR8-201ENST00000406438 AIMP1Q12904 312 aaKnown RBP14.44□□□□□ -0.1
SMCR8-201ENST00000406438 AAMPQ13685 434 aa14.44□□□□□ -0.1
SMCR8-201ENST00000406438 EXOC6Q8TAG9 804 aa14.44□□□□□ -0.1
SMCR8-201ENST00000406438 KIF7Q2M1P5 1343 aa14.43□□□□□ -0.1
SMCR8-201ENST00000406438 HIP1O00291 1037 aa14.43□□□□□ -0.1
SMCR8-201ENST00000406438 FAM43AQ8N2R8 423 aa14.43□□□□□ -0.1
SMCR8-201ENST00000406438 KINO60870 393 aaKnown RBP14.42□□□□□ -0.1
SMCR8-201ENST00000406438 FILIP1LQ4L180 1135 aa14.42□□□□□ -0.1
SMCR8-201ENST00000406438 DHX57Q6P158 1386 aaKnown RBP14.42□□□□□ -0.1
SMCR8-201ENST00000406438 CCP110O43303 1012 aa14.42□□□□□ -0.1
SMCR8-201ENST00000406438 C22orf23Q9BZE7 217 aa14.42□□□□□ -0.1
SMCR8-201ENST00000406438 PDCP20941 246 aa14.41□□□□□ -0.1
SMCR8-201ENST00000406438 TTLL5Q6EMB2 1281 aa14.41□□□□□ -0.1
SMCR8-201ENST00000406438 MTMR7Q9Y216 660 aa14.41□□□□□ -0.1
SMCR8-201ENST00000406438 H0YHG0 523 aa14.41□□□□□ -0.1
SMCR8-201ENST00000406438 HMOX1P09601 288 aa14.41□□□□□ -0.1
SMCR8-201ENST00000406438 CCDC39Q9UFE4 941 aa14.41□□□□□ -0.1
SMCR8-201ENST00000406438 ERLIN2O94905 339 aa14.41□□□□□ -0.1
SMCR8-201ENST00000406438 NASPP49321 788 aaPredicted RBP14.41□□□□□ -0.1
SMCR8-201ENST00000406438 LNPKQ9C0E8 428 aa14.41□□□□□ -0.1
SMCR8-201ENST00000406438 CFAP65Q6ZU64 1925 aaKnown RBP14.41□□□□□ -0.1
SMCR8-201ENST00000406438 PRKRIP1Q9H875 184 aaPredicted RBP14.4□□□□□ -0.1
SMCR8-201ENST00000406438 ARHGAP5Q13017 1502 aa14.4□□□□□ -0.1
SMCR8-201ENST00000406438 RRBP1Q9P2E9 1410 aaKnown RBP14.4□□□□□ -0.1
SMCR8-201ENST00000406438 SUPT6HQ7KZ85 1726 aaKnown RBP14.39□□□□□ -0.11
SMCR8-201ENST00000406438 CCDC30Q5VVM6 783 aa14.39□□□□□ -0.11
SMCR8-201ENST00000406438 LUC7LQ9NQ29 371 aaKnown RBP14.39□□□□□ -0.11
SMCR8-201ENST00000406438 MTERF4Q7Z6M4 381 aaKnown RBP14.39□□□□□ -0.11
SMCR8-201ENST00000406438 CLASRPQ8N2M8 674 aaKnown RBP14.39□□□□□ -0.11
SMCR8-201ENST00000406438 SEPT7Q16181 437 aaKnown RBP14.38□□□□□ -0.11
SMCR8-201ENST00000406438 VSIG10Q8N0Z9 540 aa14.38□□□□□ -0.11
SMCR8-201ENST00000406438 SMC2O95347 1197 aa14.38□□□□□ -0.11
SMCR8-201ENST00000406438 PTPRGP23470 1445 aa14.38□□□□□ -0.11
SMCR8-201ENST00000406438 KRT18P05783 430 aaKnown RBP14.38□□□□□ -0.11
SMCR8-201ENST00000406438 NEFHP12036 1026 aa14.38□□□□□ -0.11
SMCR8-201ENST00000406438 FSD1Q9BTV5 496 aa14.38□□□□□ -0.11
SMCR8-201ENST00000406438 GNL3LQ9NVN8 582 aaKnown RBP14.38□□□□□ -0.11
SMCR8-201ENST00000406438 GOLGA6L10A6NI86 522 aa14.37□□□□□ -0.11
SMCR8-201ENST00000406438 CDC45O75419 566 aa14.37□□□□□ -0.11
SMCR8-201ENST00000406438 MCM2P49736 904 aa14.37□□□□□ -0.11
SMCR8-201ENST00000406438 ANKRD18AQ8IVF6 992 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms