RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 C1orf167Q5SNV9 1468 aa15.46■□□□□ 0.06
RPAIN-204ENST00000405578 METP08581 1390 aa15.45■□□□□ 0.06
RPAIN-204ENST00000405578 SPHKAPQ2M3C7 1700 aa15.45■□□□□ 0.06
RPAIN-204ENST00000405578 BRWD3Q6RI45 1802 aa15.45■□□□□ 0.06
RPAIN-204ENST00000405578 CCDC125Q86Z20 511 aa15.43■□□□□ 0.06
RPAIN-204ENST00000405578 FNBP4Q8N3X1 1017 aaPredicted RBP15.43■□□□□ 0.06
RPAIN-204ENST00000405578 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.43■□□□□ 0.06
RPAIN-204ENST00000405578 SOS2Q07890 1332 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-204ENST00000405578 MYOM2P54296 1465 aa15.4■□□□□ 0.06
RPAIN-204ENST00000405578 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
RPAIN-204ENST00000405578 GLI3P10071 1580 aa15.38■□□□□ 0.05
RPAIN-204ENST00000405578 BLMP54132 1417 aaPredicted RBP15.38■□□□□ 0.05
RPAIN-204ENST00000405578 ORAI2Q96SN7 254 aa15.38■□□□□ 0.05
RPAIN-204ENST00000405578 NEXMIFQ5QGS0 1516 aa15.38■□□□□ 0.05
RPAIN-204ENST00000405578 ZNF326Q5BKZ1 582 aaKnown RBP15.36■□□□□ 0.05
RPAIN-204ENST00000405578 KIF1BO60333 1816 aa15.36■□□□□ 0.05
RPAIN-204ENST00000405578 CCDC144AA2RUR9 1427 aa15.35■□□□□ 0.05
RPAIN-204ENST00000405578 DEFB132Q7Z7B7 95 aa15.35■□□□□ 0.05
RPAIN-204ENST00000405578 GJD4Q96KN9 370 aaPredicted RBP15.35■□□□□ 0.05
RPAIN-204ENST00000405578 CLTCL1P53675 1640 aa15.34■□□□□ 0.05
RPAIN-204ENST00000405578 RALGAPBQ86X10 1494 aa15.33■□□□□ 0.05
RPAIN-204ENST00000405578 PXDNQ92626 1479 aa15.33■□□□□ 0.04
RPAIN-204ENST00000405578 DHX57Q6P158 1386 aaKnown RBP15.32■□□□□ 0.04
RPAIN-204ENST00000405578 ROBO2Q9HCK4 1378 aa15.32■□□□□ 0.04
RPAIN-204ENST00000405578 ANKRD30BQ9BXX2 1392 aa15.31■□□□□ 0.04
RPAIN-204ENST00000405578 SF3B2Q13435 895 aaKnown RBP15.3■□□□□ 0.04
RPAIN-204ENST00000405578 CDC42BPGQ6DT37 1551 aa15.3■□□□□ 0.04
RPAIN-204ENST00000405578 PLCH1Q4KWH8 1693 aa15.29■□□□□ 0.04
RPAIN-204ENST00000405578 USP32Q8NFA0 1604 aa15.29■□□□□ 0.04
RPAIN-204ENST00000405578 SLIT2O94813 1529 aa15.29■□□□□ 0.04
RPAIN-204ENST00000405578 NPHP3Q7Z494 1330 aa15.29■□□□□ 0.04
RPAIN-204ENST00000405578 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-204ENST00000405578 XPCQ01831 940 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-204ENST00000405578 PRAG1Q86YV5 1406 aa15.27■□□□□ 0.04
RPAIN-204ENST00000405578 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.04
RPAIN-204ENST00000405578 CCER1Q8TC90 406 aaPredicted RBP15.27■□□□□ 0.04
RPAIN-204ENST00000405578 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
RPAIN-204ENST00000405578 ESCO1Q5FWF5 840 aa15.26■□□□□ 0.03
RPAIN-204ENST00000405578 RPGRIP1LQ68CZ1 1315 aa15.25■□□□□ 0.03
RPAIN-204ENST00000405578 ABCA3Q99758 1704 aa15.25■□□□□ 0.03
RPAIN-204ENST00000405578 PPLO60437 1756 aa15.24■□□□□ 0.03
RPAIN-204ENST00000405578 CLSPNQ9HAW4 1339 aa15.24■□□□□ 0.03
RPAIN-204ENST00000405578 RGL3Q3MIN7 710 aa15.24■□□□□ 0.03
RPAIN-204ENST00000405578 SEPT12Q8IYM1 358 aa15.24■□□□□ 0.03
RPAIN-204ENST00000405578 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
RPAIN-204ENST00000405578 KIF1AQ12756 1690 aa15.23■□□□□ 0.03
RPAIN-204ENST00000405578 FOXO3O43524 673 aa15.23■□□□□ 0.03
RPAIN-204ENST00000405578 NEUROD1Q13562 356 aa15.22■□□□□ 0.03
RPAIN-204ENST00000405578 FMN2Q9NZ56 1722 aa15.22■□□□□ 0.03
RPAIN-204ENST00000405578 RGPD8O14715 1765 aaPredicted RBP15.21■□□□□ 0.03
RPAIN-204ENST00000405578 VGFO15240 615 aaPredicted RBP15.21■□□□□ 0.03
RPAIN-204ENST00000405578 LRPPRCP42704 1394 aaKnown RBP15.21■□□□□ 0.02
RPAIN-204ENST00000405578 SPATA31E1Q6ZUB1 1445 aa15.19■□□□□ 0.02
RPAIN-204ENST00000405578 NUTM2FA1L443 756 aa15.19■□□□□ 0.02
RPAIN-204ENST00000405578 BAG6P46379 1132 aa15.19■□□□□ 0.02
RPAIN-204ENST00000405578 KRT27Q7Z3Y8 459 aa15.19■□□□□ 0.02
RPAIN-204ENST00000405578 STAC3Q96MF2 364 aa15.19■□□□□ 0.02
RPAIN-204ENST00000405578 SIN3AQ96ST3 1273 aa15.19■□□□□ 0.02
RPAIN-204ENST00000405578 NRAPQ86VF7 1730 aa15.19■□□□□ 0.02
RPAIN-204ENST00000405578 TNS1Q9HBL0 1735 aaKnown RBP15.19■□□□□ 0.02
RPAIN-204ENST00000405578 IFT172Q9UG01 1749 aa15.18■□□□□ 0.02
RPAIN-204ENST00000405578 CCDC9Q9Y3X0 531 aaKnown RBP15.18■□□□□ 0.02
RPAIN-204ENST00000405578 SPATA31A3Q5VYP0 1347 aa15.17■□□□□ 0.02
RPAIN-204ENST00000405578 KNDC1Q76NI1 1749 aa15.17■□□□□ 0.02
RPAIN-204ENST00000405578 VPS72Q15906 364 aa15.17■□□□□ 0.02
RPAIN-204ENST00000405578 TONSLQ96HA7 1378 aa15.15■□□□□ 0.02
RPAIN-204ENST00000405578 A0A0G2JS52 829 aa15.15■□□□□ 0.02
RPAIN-204ENST00000405578 HAP1P54257 671 aaPredicted RBP15.15■□□□□ 0.02
RPAIN-204ENST00000405578 MYT1Q01538 1121 aa15.15■□□□□ 0.02
RPAIN-204ENST00000405578 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
RPAIN-204ENST00000405578 ONECUT3O60422 494 aaPredicted RBP15.14■□□□□ 0.01
RPAIN-204ENST00000405578 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
RPAIN-204ENST00000405578 R3HDM1Q15032 1099 aaKnown RBP15.14■□□□□ 0.01
RPAIN-204ENST00000405578 TNS3Q68CZ2 1445 aa15.14■□□□□ 0.01
RPAIN-204ENST00000405578 EN1Q05925 392 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-204ENST00000405578 CABLES1Q8TDN4 633 aa15.13■□□□□ 0.01
RPAIN-204ENST00000405578 KDM2AQ9Y2K7 1162 aa15.13■□□□□ 0.01
RPAIN-204ENST00000405578 TECPR2O15040 1411 aa15.11■□□□□ 0.01
RPAIN-204ENST00000405578 YY1P25490 414 aa15.11■□□□□ 0.01
RPAIN-204ENST00000405578 KRT28Q7Z3Y7 464 aa15.11■□□□□ 0.01
RPAIN-204ENST00000405578 WAPLQ7Z5K2 1190 aa15.11■□□□□ 0.01
RPAIN-204ENST00000405578 L3MBTL2Q969R5 705 aa15.11■□□□□ 0.01
RPAIN-204ENST00000405578 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
RPAIN-204ENST00000405578 STK26Q9P289 416 aa15.1■□□□□ 0.01
RPAIN-204ENST00000405578 ADGRB2O60241 1585 aa15.1■□□□□ 0.01
RPAIN-204ENST00000405578 PLEKHH1Q9ULM0 1364 aa15.1■□□□□ 0.01
RPAIN-204ENST00000405578 FAM98CQ17RN3 349 aaKnown RBP15.09■□□□□ 0.01
RPAIN-204ENST00000405578 ADGRF5Q8IZF2 1346 aa15.09■□□□□ 0.01
RPAIN-204ENST00000405578 THSD7AQ9UPZ6 1657 aa15.09■□□□□ 0.01
RPAIN-204ENST00000405578 DISP2A7MBM2 1401 aa15.09■□□□□ 0.01
RPAIN-204ENST00000405578 COL14A1Q05707 1796 aaKnown RBP15.08■□□□□ 0.01
RPAIN-204ENST00000405578 FAM182BQ5T319 152 aa15.08■□□□□ 0
RPAIN-204ENST00000405578 RREB1Q92766 1687 aa15.07■□□□□ 0
RPAIN-204ENST00000405578 NUP188Q5SRE5 1749 aa15.06■□□□□ 0
RPAIN-204ENST00000405578 LMOD2Q6P5Q4 547 aa15.06■□□□□ 0
RPAIN-204ENST00000405578 NRXN1Q9ULB1 1477 aa15.06■□□□□ 0
RPAIN-204ENST00000405578 TRPM3Q9HCF6 1732 aaPredicted RBP15.06■□□□□ 0
RPAIN-204ENST00000405578 FAM83GA6ND36 823 aa15.05■□□□□ -0
RPAIN-204ENST00000405578 EZH2Q15910 746 aaKnown RBP15.05■□□□□ -0
RPAIN-204ENST00000405578 PHF8Q9UPP1 1060 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms