RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 PROSER2Q86WR7 435 aaPredicted RBP15.17■□□□□ 0.02
PDE4D-206ENST00000405053 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.17■□□□□ 0.02
PDE4D-206ENST00000405053 TMEM94Q12767 1356 aa15.16■□□□□ 0.02
PDE4D-206ENST00000405053 ADGRL3Q9HAR2 1447 aa15.16■□□□□ 0.02
PDE4D-206ENST00000405053 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.02
PDE4D-206ENST00000405053 HIRIP3Q9BW71 556 aaPredicted RBP15.15■□□□□ 0.02
PDE4D-206ENST00000405053 MINK1Q8N4C8 1332 aaPredicted RBP15.14■□□□□ 0.01
PDE4D-206ENST00000405053 TULP4Q9NRJ4 1543 aa15.13■□□□□ 0.01
PDE4D-206ENST00000405053 TMF1P82094 1093 aa15.13■□□□□ 0.01
PDE4D-206ENST00000405053 NALCNQ8IZF0 1738 aa15.13■□□□□ 0.01
PDE4D-206ENST00000405053 PUS7Q96PZ0 661 aaKnown RBP15.13■□□□□ 0.01
PDE4D-206ENST00000405053 DISP3Q9P2K9 1392 aa15.12■□□□□ 0.01
PDE4D-206ENST00000405053 CDC42BPGQ6DT37 1551 aa15.12■□□□□ 0.01
PDE4D-206ENST00000405053 XIRP1Q702N8 1843 aaKnown RBP15.12■□□□□ 0.01
PDE4D-206ENST00000405053 EVC2Q86UK5 1308 aa15.12■□□□□ 0.01
PDE4D-206ENST00000405053 DCCP43146 1447 aa15.11■□□□□ 0.01
PDE4D-206ENST00000405053 WASLO00401 505 aaPredicted RBP15.11■□□□□ 0.01
PDE4D-206ENST00000405053 RBM33Q96EV2 1170 aaKnown RBP15.11■□□□□ 0.01
PDE4D-206ENST00000405053 C19orf44Q9H6X5 657 aa15.11■□□□□ 0.01
PDE4D-206ENST00000405053 C11orf95C9JLR9 678 aaPredicted RBP15.1■□□□□ 0.01
PDE4D-206ENST00000405053 CDCA8Q53HL2 280 aa15.1■□□□□ 0.01
PDE4D-206ENST00000405053 ZNF316A6NFI3 1004 aaPredicted RBP15.09■□□□□ 0.01
PDE4D-206ENST00000405053 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
PDE4D-206ENST00000405053 KIF7Q2M1P5 1343 aa15.08■□□□□ 0
PDE4D-206ENST00000405053 MSH6P52701 1360 aa15.08■□□□□ 0
PDE4D-206ENST00000405053 C14orf37Q86TY3 774 aa15.07■□□□□ 0
PDE4D-206ENST00000405053 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
PDE4D-206ENST00000405053 CCDC7Q96M83 1385 aa15.07■□□□□ 0
PDE4D-206ENST00000405053 FMN2Q9NZ56 1722 aa15.06■□□□□ 0
PDE4D-206ENST00000405053 ANKARQ7Z5J8 1434 aa15.06■□□□□ 0
PDE4D-206ENST00000405053 IQSEC2Q5JU85 1478 aa15.06■□□□□ 0
PDE4D-206ENST00000405053 SRPK2P78362 688 aaKnown RBP15.05■□□□□ -0
PDE4D-206ENST00000405053 CADPS2Q86UW7 1296 aa15.05■□□□□ -0
PDE4D-206ENST00000405053 CABP2Q9NPB3 220 aa15.05■□□□□ -0
PDE4D-206ENST00000405053 ATAD2Q6PL18 1390 aa15.05■□□□□ -0
PDE4D-206ENST00000405053 ATP7BP35670 1465 aa15.05■□□□□ -0
PDE4D-206ENST00000405053 PRR36Q9H6K5 1346 aa15.04■□□□□ -0
PDE4D-206ENST00000405053 NINLQ9Y2I6 1382 aa15.03■□□□□ -0
PDE4D-206ENST00000405053 ATF3P18847 181 aa15.03■□□□□ -0
PDE4D-206ENST00000405053 NUDT16Q96DE0 195 aaKnown RBP15.03■□□□□ -0
PDE4D-206ENST00000405053 USP32Q8NFA0 1604 aa15.03■□□□□ -0
PDE4D-206ENST00000405053 MST1RQ04912 1400 aa15.02■□□□□ -0
PDE4D-206ENST00000405053 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
PDE4D-206ENST00000405053 TOPAZ1Q8N9V7 1692 aa15.01□□□□□ -0.01
PDE4D-206ENST00000405053 C1orf167Q5SNV9 1468 aa15.01□□□□□ -0.01
PDE4D-206ENST00000405053 MYOM1P52179 1685 aa15□□□□□ -0.01
PDE4D-206ENST00000405053 PLEKHG3A1L390 1219 aa14.99□□□□□ -0.01
PDE4D-206ENST00000405053 CERKQ8TCT0 537 aa14.99□□□□□ -0.01
PDE4D-206ENST00000405053 ITSN1Q15811 1721 aa14.98□□□□□ -0.01
PDE4D-206ENST00000405053 PPIP5K1Q6PFW1 1433 aa14.98□□□□□ -0.01
PDE4D-206ENST00000405053 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
PDE4D-206ENST00000405053 SLC12A5Q9H2X9 1139 aa14.97□□□□□ -0.01
PDE4D-206ENST00000405053 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
PDE4D-206ENST00000405053 SLAIN2Q9P270 581 aa14.97□□□□□ -0.01
PDE4D-206ENST00000405053 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
PDE4D-206ENST00000405053 RGPD8O14715 1765 aaPredicted RBP14.96□□□□□ -0.01
PDE4D-206ENST00000405053 POLR3GLQ9BT43 218 aa14.96□□□□□ -0.01
PDE4D-206ENST00000405053 POLR3AO14802 1390 aaPredicted RBP14.96□□□□□ -0.02
PDE4D-206ENST00000405053 CPSF1Q10570 1443 aaKnown RBP14.95□□□□□ -0.02
PDE4D-206ENST00000405053 ANKRD36BQ8N2N9 1353 aa14.95□□□□□ -0.02
PDE4D-206ENST00000405053 ESCO1Q5FWF5 840 aa14.94□□□□□ -0.02
PDE4D-206ENST00000405053 TMC1Q8TDI8 760 aa14.94□□□□□ -0.02
PDE4D-206ENST00000405053 ORAI2Q96SN7 254 aa14.94□□□□□ -0.02
PDE4D-206ENST00000405053 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
PDE4D-206ENST00000405053 KIF1AQ12756 1690 aa14.93□□□□□ -0.02
PDE4D-206ENST00000405053 TERF2IPQ9NYB0 399 aa14.93□□□□□ -0.02
PDE4D-206ENST00000405053 ACEP12821 1306 aa14.92□□□□□ -0.02
PDE4D-206ENST00000405053 TOM1O60784 492 aa14.92□□□□□ -0.02
PDE4D-206ENST00000405053 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
PDE4D-206ENST00000405053 ZNF692Q9BU19 519 aaPredicted RBP14.92□□□□□ -0.02
PDE4D-206ENST00000405053 PANK3Q9H999 370 aa14.92□□□□□ -0.02
PDE4D-206ENST00000405053 A0A1W2PP64 1363 aa14.92□□□□□ -0.02
PDE4D-206ENST00000405053 DDX10Q13206 875 aaKnown RBP14.91□□□□□ -0.02
PDE4D-206ENST00000405053 HDGFL2Q7Z4V5 671 aaPredicted RBP14.91□□□□□ -0.02
PDE4D-206ENST00000405053 PMFBP1Q8TBY8 1022 aa14.91□□□□□ -0.02
PDE4D-206ENST00000405053 AKAP12Q02952 1782 aa14.9□□□□□ -0.02
PDE4D-206ENST00000405053 BRD4O60885 1362 aaPredicted RBP14.9□□□□□ -0.02
PDE4D-206ENST00000405053 PER1O15534 1290 aaPredicted RBP14.9□□□□□ -0.02
PDE4D-206ENST00000405053 NGDNQ8NEJ9 315 aaKnown RBP14.89□□□□□ -0.03
PDE4D-206ENST00000405053 CARD14Q9BXL6 1004 aa14.89□□□□□ -0.03
PDE4D-206ENST00000405053 USP6P35125 1406 aa14.89□□□□□ -0.03
PDE4D-206ENST00000405053 SSH2Q76I76 1423 aa14.89□□□□□ -0.03
PDE4D-206ENST00000405053 MON2Q7Z3U7 1717 aa14.89□□□□□ -0.03
PDE4D-206ENST00000405053 KTN1Q86UP2 1357 aaKnown RBP14.88□□□□□ -0.03
PDE4D-206ENST00000405053 UBAP1LF5GYI3 381 aa14.88□□□□□ -0.03
PDE4D-206ENST00000405053 EDC4Q6P2E9 1401 aaKnown RBP14.88□□□□□ -0.03
PDE4D-206ENST00000405053 NPHP3Q7Z494 1330 aa14.88□□□□□ -0.03
PDE4D-206ENST00000405053 FOXO3O43524 673 aa14.87□□□□□ -0.03
PDE4D-206ENST00000405053 ROBO1Q9Y6N7 1651 aa14.87□□□□□ -0.03
PDE4D-206ENST00000405053 NRKQ7Z2Y5 1582 aa14.86□□□□□ -0.03
PDE4D-206ENST00000405053 NSD3Q9BZ95 1437 aa14.86□□□□□ -0.03
PDE4D-206ENST00000405053 NHSL1Q5SYE7 1610 aa14.86□□□□□ -0.03
PDE4D-206ENST00000405053 AHDC1Q5TGY3 1603 aaPredicted RBP14.85□□□□□ -0.03
PDE4D-206ENST00000405053 PXDNQ92626 1479 aa14.85□□□□□ -0.03
PDE4D-206ENST00000405053 SOS2Q07890 1332 aaPredicted RBP14.85□□□□□ -0.03
PDE4D-206ENST00000405053 NPC1L1Q9UHC9 1359 aa14.85□□□□□ -0.03
PDE4D-206ENST00000405053 PSME1Q06323 249 aa14.84□□□□□ -0.03
PDE4D-206ENST00000405053 KRT28Q7Z3Y7 464 aa14.84□□□□□ -0.03
PDE4D-206ENST00000405053 KNSTRNQ9Y448 316 aa14.84□□□□□ -0.03
PDE4D-206ENST00000405053 TTC21BQ7Z4L5 1316 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms