RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 KNDC1Q76NI1 1749 aa26.98■■□□□ 1.91
HDAC11-204ENST00000404040 MYOM2P54296 1465 aa26.97■■□□□ 1.91
HDAC11-204ENST00000404040 PXDNQ92626 1479 aa26.96■■□□□ 1.91
HDAC11-204ENST00000404040 EP400Q96L91 3159 aa26.95■■□□□ 1.9
HDAC11-204ENST00000404040 ATRNO75882 1429 aa26.94■■□□□ 1.9
HDAC11-204ENST00000404040 ATAD2Q6PL18 1390 aa26.94■■□□□ 1.9
HDAC11-204ENST00000404040 USP21Q9UK80 565 aa26.93■■□□□ 1.9
HDAC11-204ENST00000404040 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.93■■□□□ 1.9
HDAC11-204ENST00000404040 FMN2Q9NZ56 1722 aa26.91■■□□□ 1.9
HDAC11-204ENST00000404040 FNBP4Q8N3X1 1017 aaPredicted RBP26.91■■□□□ 1.9
HDAC11-204ENST00000404040 SLC4A1APQ9BWU0 796 aaKnown RBP26.91■■□□□ 1.9
HDAC11-204ENST00000404040 TRPC5Q9UL62 973 aaPredicted RBP26.91■■□□□ 1.9
HDAC11-204ENST00000404040 SRCAPQ6ZRS2 3230 aa26.9■■□□□ 1.9
HDAC11-204ENST00000404040 TECPR2O15040 1411 aa26.9■■□□□ 1.9
HDAC11-204ENST00000404040 NPHP3Q7Z494 1330 aa26.9■■□□□ 1.9
HDAC11-204ENST00000404040 KIF1AQ12756 1690 aa26.89■■□□□ 1.89
HDAC11-204ENST00000404040 ESCO1Q5FWF5 840 aa26.85■■□□□ 1.89
HDAC11-204ENST00000404040 BCL9LQ86UU0 1499 aa26.85■■□□□ 1.89
HDAC11-204ENST00000404040 RGPD8O14715 1765 aaPredicted RBP26.84■■□□□ 1.89
HDAC11-204ENST00000404040 CCDC144AA2RUR9 1427 aa26.84■■□□□ 1.89
HDAC11-204ENST00000404040 SPATA31E1Q6ZUB1 1445 aa26.84■■□□□ 1.89
HDAC11-204ENST00000404040 ADGRF5Q8IZF2 1346 aa26.84■■□□□ 1.89
HDAC11-204ENST00000404040 LRPPRCP42704 1394 aaKnown RBP26.82■■□□□ 1.88
HDAC11-204ENST00000404040 USP32Q8NFA0 1604 aa26.8■■□□□ 1.88
HDAC11-204ENST00000404040 FOXD1Q16676 465 aa26.8■■□□□ 1.88
HDAC11-204ENST00000404040 ANKRD30BQ9BXX2 1392 aa26.8■■□□□ 1.88
HDAC11-204ENST00000404040 PIK3C2GO75747 1445 aa26.8■■□□□ 1.88
HDAC11-204ENST00000404040 FOXO3O43524 673 aa26.79■■□□□ 1.88
HDAC11-204ENST00000404040 XPCQ01831 940 aaPredicted RBP26.79■■□□□ 1.88
HDAC11-204ENST00000404040 BRWD3Q6RI45 1802 aa26.79■■□□□ 1.88
HDAC11-204ENST00000404040 ABCA3Q99758 1704 aa26.77■■□□□ 1.88
HDAC11-204ENST00000404040 GLI3P10071 1580 aa26.77■■□□□ 1.88
HDAC11-204ENST00000404040 ABCC11Q96J66 1382 aa26.77■■□□□ 1.88
HDAC11-204ENST00000404040 PLEKHH1Q9ULM0 1364 aa26.76■■□□□ 1.87
HDAC11-204ENST00000404040 WAPLQ7Z5K2 1190 aa26.76■■□□□ 1.87
HDAC11-204ENST00000404040 STK26Q9P289 416 aa26.76■■□□□ 1.87
HDAC11-204ENST00000404040 PLCH1Q4KWH8 1693 aa26.74■■□□□ 1.87
HDAC11-204ENST00000404040 SLIT2O94813 1529 aa26.74■■□□□ 1.87
HDAC11-204ENST00000404040 YTHDC2Q9H6S0 1430 aaKnown RBP26.73■■□□□ 1.87
HDAC11-204ENST00000404040 NUTM2FA1L443 756 aa26.73■■□□□ 1.87
HDAC11-204ENST00000404040 NWD2Q9ULI1 1742 aa26.73■■□□□ 1.87
HDAC11-204ENST00000404040 RGL3Q3MIN7 710 aa26.72■■□□□ 1.87
HDAC11-204ENST00000404040 RALGAPBQ86X10 1494 aa26.71■■□□□ 1.87
HDAC11-204ENST00000404040 GJD4Q96KN9 370 aaPredicted RBP26.71■■□□□ 1.87
HDAC11-204ENST00000404040 TMEM132EQ6IEE7 984 aa26.7■■□□□ 1.86
HDAC11-204ENST00000404040 SPATA31A3Q5VYP0 1347 aa26.69■■□□□ 1.86
HDAC11-204ENST00000404040 CCDC125Q86Z20 511 aa26.68■■□□□ 1.86
HDAC11-204ENST00000404040 NRXN1Q9ULB1 1477 aa26.67■■□□□ 1.86
HDAC11-204ENST00000404040 ZRANB1Q9UGI0 708 aa26.66■■□□□ 1.86
HDAC11-204ENST00000404040 TNS3Q68CZ2 1445 aa26.65■■□□□ 1.86
HDAC11-204ENST00000404040 UNC5CLQ8IV45 518 aa26.65■■□□□ 1.86
HDAC11-204ENST00000404040 MPHOSPH9Q99550 1183 aa26.65■■□□□ 1.86
HDAC11-204ENST00000404040 BLMP54132 1417 aaPredicted RBP26.62■■□□□ 1.85
HDAC11-204ENST00000404040 ADGRB2O60241 1585 aa26.61■■□□□ 1.85
HDAC11-204ENST00000404040 KRT28Q7Z3Y7 464 aa26.6■■□□□ 1.85
HDAC11-204ENST00000404040 SIRT1Q96EB6 747 aa26.6■■□□□ 1.85
HDAC11-204ENST00000404040 NRAPQ86VF7 1730 aa26.59■■□□□ 1.85
HDAC11-204ENST00000404040 TRPM3Q9HCF6 1732 aaPredicted RBP26.59■■□□□ 1.85
HDAC11-204ENST00000404040 DLC1Q96QB1 1528 aa26.58■■□□□ 1.85
HDAC11-204ENST00000404040 C14orf93Q9H972 538 aaKnown RBP26.57■■□□□ 1.84
HDAC11-204ENST00000404040 PHF8Q9UPP1 1060 aa26.57■■□□□ 1.84
HDAC11-204ENST00000404040 SBNO1A3KN83 1393 aa26.57■■□□□ 1.84
HDAC11-204ENST00000404040 ALS2Q96Q42 1657 aa26.55■■□□□ 1.84
HDAC11-204ENST00000404040 DHX57Q6P158 1386 aaKnown RBP26.55■■□□□ 1.84
HDAC11-204ENST00000404040 ARHGEF10O15013 1369 aa26.54■■□□□ 1.84
HDAC11-204ENST00000404040 ANKARQ7Z5J8 1434 aa26.54■■□□□ 1.84
HDAC11-204ENST00000404040 HAP1P54257 671 aaPredicted RBP26.53■■□□□ 1.84
HDAC11-204ENST00000404040 PSME1Q06323 249 aa26.53■■□□□ 1.84
HDAC11-204ENST00000404040 ADGRB1O14514 1584 aa26.52■■□□□ 1.84
HDAC11-204ENST00000404040 VPS72Q15906 364 aa26.52■■□□□ 1.84
HDAC11-204ENST00000404040 CFAP70Q5T0N1 1121 aa26.52■■□□□ 1.84
HDAC11-204ENST00000404040 CABLES1Q8TDN4 633 aa26.52■■□□□ 1.84
HDAC11-204ENST00000404040 CRYBG1Q9Y4K1 1723 aa26.52■■□□□ 1.84
HDAC11-204ENST00000404040 LRP5O75197 1615 aa26.5■■□□□ 1.83
HDAC11-204ENST00000404040 SEPT12Q8IYM1 358 aa26.5■■□□□ 1.83
HDAC11-204ENST00000404040 PRAM1Q96QH2 718 aa26.5■■□□□ 1.83
HDAC11-204ENST00000404040 COL14A1Q05707 1796 aaKnown RBP26.5■■□□□ 1.83
HDAC11-204ENST00000404040 SAFB2Q14151 953 aaKnown RBP eCLIP26.48■■□□□ 1.83
HDAC11-204ENST00000404040 ACIN1Q9UKV3 1341 aaKnown RBP26.46■■□□□ 1.83
HDAC11-204ENST00000404040 PLEKHG5O94827 1062 aa26.46■■□□□ 1.83
HDAC11-204ENST00000404040 DEFB132Q7Z7B7 95 aa26.46■■□□□ 1.83
HDAC11-204ENST00000404040 RGPD1P0DJD0 1748 aa26.45■■□□□ 1.83
HDAC11-204ENST00000404040 ONECUT3O60422 494 aaPredicted RBP26.45■■□□□ 1.82
HDAC11-204ENST00000404040 LMOD2Q6P5Q4 547 aa26.45■■□□□ 1.82
HDAC11-204ENST00000404040 TULP4Q9NRJ4 1543 aa26.44■■□□□ 1.82
HDAC11-204ENST00000404040 CCDC9Q9Y3X0 531 aaKnown RBP26.44■■□□□ 1.82
HDAC11-204ENST00000404040 ITSN1Q15811 1721 aa26.44■■□□□ 1.82
HDAC11-204ENST00000404040 SF3B2Q13435 895 aaKnown RBP26.43■■□□□ 1.82
HDAC11-204ENST00000404040 KRT27Q7Z3Y8 459 aa26.42■■□□□ 1.82
HDAC11-204ENST00000404040 POGKQ9P215 609 aa26.42■■□□□ 1.82
HDAC11-204ENST00000404040 FAM83GA6ND36 823 aa26.41■■□□□ 1.82
HDAC11-204ENST00000404040 PMFBP1Q8TBY8 1022 aa26.41■■□□□ 1.82
HDAC11-204ENST00000404040 ARHGEF28Q8N1W1 1705 aaKnown RBP26.41■■□□□ 1.82
HDAC11-204ENST00000404040 EIF3AQ14152 1382 aaKnown RBP26.4■■□□□ 1.82
HDAC11-204ENST00000404040 THSD7AQ9UPZ6 1657 aa26.4■■□□□ 1.82
HDAC11-204ENST00000404040 TNS1Q9HBL0 1735 aaKnown RBP26.39■■□□□ 1.81
HDAC11-204ENST00000404040 PHRF1Q9P1Y6 1649 aaKnown RBP26.36■■□□□ 1.81
HDAC11-204ENST00000404040 GPRASP1Q5JY77 1395 aa26.36■■□□□ 1.81
HDAC11-204ENST00000404040 PRR36Q9H6K5 1346 aa26.36■■□□□ 1.81
HDAC11-204ENST00000404040 A0A0G2JS52 829 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms