RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 GGNBP2Q9H3C7 697 aa15.33■□□□□ 0.04
RBM39-206ENST00000403542 ADGRL1O94910 1474 aa15.32■□□□□ 0.04
RBM39-206ENST00000403542 STAC3Q96MF2 364 aa15.32■□□□□ 0.04
RBM39-206ENST00000403542 CFAP53Q96M91 514 aa15.31■□□□□ 0.04
RBM39-206ENST00000403542 MAPK8IP3Q9UPT6 1336 aa15.31■□□□□ 0.04
RBM39-206ENST00000403542 FBLN1P23142 703 aa15.3■□□□□ 0.04
RBM39-206ENST00000403542 GZF1Q9H116 711 aaPredicted RBP15.3■□□□□ 0.04
RBM39-206ENST00000403542 ABCA6Q8N139 1617 aa15.3■□□□□ 0.04
RBM39-206ENST00000403542 ATP7AQ04656 1500 aa15.3■□□□□ 0.04
RBM39-206ENST00000403542 POLR3AO14802 1390 aaPredicted RBP15.3■□□□□ 0.04
RBM39-206ENST00000403542 CEP152O94986 1710 aa15.3■□□□□ 0.04
RBM39-206ENST00000403542 MFAP1P55081 439 aaKnown RBP15.3■□□□□ 0.04
RBM39-206ENST00000403542 SMC4Q9NTJ3 1288 aa15.3■□□□□ 0.04
RBM39-206ENST00000403542 SRPK2P78362 688 aaKnown RBP15.3■□□□□ 0.04
RBM39-206ENST00000403542 EIF5BO60841 1220 aaKnown RBP15.29■□□□□ 0.04
RBM39-206ENST00000403542 EXOSC9Q06265 439 aaKnown RBP15.29■□□□□ 0.04
RBM39-206ENST00000403542 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
RBM39-206ENST00000403542 UPF2Q9HAU5 1272 aaKnown RBP15.29■□□□□ 0.04
RBM39-206ENST00000403542 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
RBM39-206ENST00000403542 BECN1Q14457 450 aa15.29■□□□□ 0.04
RBM39-206ENST00000403542 PMFBP1Q8TBY8 1022 aa15.29■□□□□ 0.04
RBM39-206ENST00000403542 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
RBM39-206ENST00000403542 CLASP1Q7Z460 1538 aa15.28■□□□□ 0.04
RBM39-206ENST00000403542 TBC1D2Q9BYX2 928 aa15.27■□□□□ 0.03
RBM39-206ENST00000403542 C14orf93Q9H972 538 aaKnown RBP15.27■□□□□ 0.03
RBM39-206ENST00000403542 MAP3K4Q9Y6R4 1608 aa15.27■□□□□ 0.03
RBM39-206ENST00000403542 RWDD1Q9H446 243 aaPredicted RBP15.26■□□□□ 0.03
RBM39-206ENST00000403542 MINK1Q8N4C8 1332 aaPredicted RBP15.26■□□□□ 0.03
RBM39-206ENST00000403542 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
RBM39-206ENST00000403542 TET3O43151 1660 aa15.25■□□□□ 0.03
RBM39-206ENST00000403542 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
RBM39-206ENST00000403542 DZIP1LQ8IYY4 767 aaKnown RBP15.25■□□□□ 0.03
RBM39-206ENST00000403542 MYH16Q9H6N6 1097 aa15.25■□□□□ 0.03
RBM39-206ENST00000403542 MVPQ14764 893 aaKnown RBP15.25■□□□□ 0.03
RBM39-206ENST00000403542 ZKSCAN2Q63HK3 967 aa15.25■□□□□ 0.03
RBM39-206ENST00000403542 WDR63Q8IWG1 891 aa15.24■□□□□ 0.03
RBM39-206ENST00000403542 SSH1Q8WYL5 1049 aa15.24■□□□□ 0.03
RBM39-206ENST00000403542 TRIM27P14373 513 aa15.24■□□□□ 0.03
RBM39-206ENST00000403542 TBC1D32Q96NH3 1257 aa15.23■□□□□ 0.03
RBM39-206ENST00000403542 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
RBM39-206ENST00000403542 MROH2AA6NES4 1674 aa15.22■□□□□ 0.03
RBM39-206ENST00000403542 EVC2Q86UK5 1308 aa15.22■□□□□ 0.03
RBM39-206ENST00000403542 ELL2O00472 640 aaPredicted RBP15.22■□□□□ 0.03
RBM39-206ENST00000403542 NGEFQ8N5V2 710 aa15.22■□□□□ 0.03
RBM39-206ENST00000403542 NPATQ14207 1427 aa15.21■□□□□ 0.03
RBM39-206ENST00000403542 PRKCSHP14314 528 aaPredicted RBP15.21■□□□□ 0.02
RBM39-206ENST00000403542 RIPK4P57078 832 aa15.21■□□□□ 0.02
RBM39-206ENST00000403542 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.02
RBM39-206ENST00000403542 THUMPD2Q9BTF0 503 aaKnown RBP15.21■□□□□ 0.02
RBM39-206ENST00000403542 PHF23Q9BUL5 403 aaPredicted RBP15.21■□□□□ 0.02
RBM39-206ENST00000403542 MYOM2P54296 1465 aa15.2■□□□□ 0.02
RBM39-206ENST00000403542 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
RBM39-206ENST00000403542 TMEM57Q8N5G2 664 aa15.2■□□□□ 0.02
RBM39-206ENST00000403542 LNPKQ9C0E8 428 aa15.2■□□□□ 0.02
RBM39-206ENST00000403542 C1orf115Q9H7X2 142 aa15.2■□□□□ 0.02
RBM39-206ENST00000403542 ASXL2Q76L83 1435 aa15.19■□□□□ 0.02
RBM39-206ENST00000403542 C22orf23Q9BZE7 217 aa15.19■□□□□ 0.02
RBM39-206ENST00000403542 ANTXR1Q9H6X2 564 aa15.19■□□□□ 0.02
RBM39-206ENST00000403542 FOXD4L1Q9NU39 408 aa15.19■□□□□ 0.02
RBM39-206ENST00000403542 TRIM35Q9UPQ4 493 aa15.19■□□□□ 0.02
RBM39-206ENST00000403542 DEPDC5O75140 1603 aa15.19■□□□□ 0.02
RBM39-206ENST00000403542 MROH1Q8NDA8 1641 aa15.19■□□□□ 0.02
RBM39-206ENST00000403542 KIF1BO60333 1816 aa15.18■□□□□ 0.02
RBM39-206ENST00000403542 ZNF518AQ6AHZ1 1483 aa15.18■□□□□ 0.02
RBM39-206ENST00000403542 NLRP1Q9C000 1473 aa15.18■□□□□ 0.02
RBM39-206ENST00000403542 PPRC1Q5VV67 1664 aaKnown RBP15.18■□□□□ 0.02
RBM39-206ENST00000403542 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
RBM39-206ENST00000403542 NINLQ9Y2I6 1382 aa15.18■□□□□ 0.02
RBM39-206ENST00000403542 UHRF1BP1LA0JNW5 1464 aa15.18■□□□□ 0.02
RBM39-206ENST00000403542 EFCAB6Q5THR3 1501 aa15.18■□□□□ 0.02
RBM39-206ENST00000403542 IDI1Q13907 227 aa15.18■□□□□ 0.02
RBM39-206ENST00000403542 HMOX1P09601 288 aa15.17■□□□□ 0.02
RBM39-206ENST00000403542 PRAM1Q96QH2 718 aa15.17■□□□□ 0.02
RBM39-206ENST00000403542 INO80Q9ULG1 1556 aaPredicted RBP15.17■□□□□ 0.02
RBM39-206ENST00000403542 SHPRHQ149N8 1683 aa15.17■□□□□ 0.02
RBM39-206ENST00000403542 VWDEQ8N2E2 1590 aa15.16■□□□□ 0.02
RBM39-206ENST00000403542 ATF7IPQ6VMQ6 1270 aa15.16■□□□□ 0.02
RBM39-206ENST00000403542 A0A1W2PP64 1363 aa15.16■□□□□ 0.02
RBM39-206ENST00000403542 SBNO2Q9Y2G9 1366 aa15.16■□□□□ 0.02
RBM39-206ENST00000403542 IQSEC2Q5JU85 1478 aa15.16■□□□□ 0.02
RBM39-206ENST00000403542 FYB1O15117 783 aa15.15■□□□□ 0.02
RBM39-206ENST00000403542 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
RBM39-206ENST00000403542 CCDC27Q2M243 656 aa15.14■□□□□ 0.01
RBM39-206ENST00000403542 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
RBM39-206ENST00000403542 PANK2Q9BZ23 570 aa15.14■□□□□ 0.01
RBM39-206ENST00000403542 ANKRD36BQ8N2N9 1353 aa15.14■□□□□ 0.01
RBM39-206ENST00000403542 PLEKHF1Q96S99 279 aa15.14■□□□□ 0.01
RBM39-206ENST00000403542 CABP1Q9NZU7 370 aa15.14■□□□□ 0.01
RBM39-206ENST00000403542 QRICH2Q9H0J4 1663 aa15.13■□□□□ 0.01
RBM39-206ENST00000403542 KIAA1210Q9ULL0 1709 aa15.13■□□□□ 0.01
RBM39-206ENST00000403542 DDX19BQ9UMR2 479 aa15.12■□□□□ 0.01
RBM39-206ENST00000403542 DIAPH1O60610 1272 aaKnown RBP15.12■□□□□ 0.01
RBM39-206ENST00000403542 NRXN1Q9ULB1 1477 aa15.12■□□□□ 0.01
RBM39-206ENST00000403542 PRKAR2BP31323 418 aa15.11■□□□□ 0.01
RBM39-206ENST00000403542 FBXO31Q5XUX0 539 aaPredicted RBP15.11■□□□□ 0.01
RBM39-206ENST00000403542 ADGRB1O14514 1584 aa15.11■□□□□ 0.01
RBM39-206ENST00000403542 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
RBM39-206ENST00000403542 ADGRB3O60242 1522 aa15.11■□□□□ 0.01
RBM39-206ENST00000403542 ANKRD45Q5TZF3 282 aa15.1■□□□□ 0.01
RBM39-206ENST00000403542 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms