RNA–Protein interactions for RNA: ENST00000402744.8

CPE-201, Transcript of carboxypeptidase E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPE, Length 2,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPE-201ENST00000402744 ARHGEF40Q8TER5 1519 aa29■■■□□ 2.23
CPE-201ENST00000402744 DEKP35659 375 aaKnown RBP29■■■□□ 2.23
CPE-201ENST00000402744 ZFYVE9O95405 1425 aa28.99■■■□□ 2.23
CPE-201ENST00000402744 EVC2Q86UK5 1308 aa28.99■■■□□ 2.23
CPE-201ENST00000402744 MINK1Q8N4C8 1332 aaPredicted RBP28.98■■■□□ 2.23
CPE-201ENST00000402744 NSD3Q9BZ95 1437 aa28.98■■■□□ 2.23
CPE-201ENST00000402744 PRAM1Q96QH2 718 aa28.98■■■□□ 2.23
CPE-201ENST00000402744 ZMYM3Q14202 1370 aa28.96■■■□□ 2.23
CPE-201ENST00000402744 POGKQ9P215 609 aa28.96■■■□□ 2.23
CPE-201ENST00000402744 NPC1L1Q9UHC9 1359 aa28.95■■■□□ 2.23
CPE-201ENST00000402744 SRPK2P78362 688 aaKnown RBP28.95■■■□□ 2.22
CPE-201ENST00000402744 ARHGEF28Q8N1W1 1705 aaKnown RBP28.94■■■□□ 2.22
CPE-201ENST00000402744 PLPPR3Q6T4P5 718 aa28.93■■■□□ 2.22
CPE-201ENST00000402744 TULP4Q9NRJ4 1543 aa28.93■■■□□ 2.22
CPE-201ENST00000402744 CCDC146Q8IYE0 955 aa28.93■■■□□ 2.22
CPE-201ENST00000402744 NBR1Q14596 966 aa28.92■■■□□ 2.22
CPE-201ENST00000402744 EXOC6Q8TAG9 804 aa28.92■■■□□ 2.22
CPE-201ENST00000402744 A2ML1A8K2U0 1454 aa28.92■■■□□ 2.22
CPE-201ENST00000402744 YTHDC2Q9H6S0 1430 aaKnown RBP28.91■■■□□ 2.22
CPE-201ENST00000402744 MORC1Q86VD1 984 aa28.91■■■□□ 2.22
CPE-201ENST00000402744 RIMS2Q9UQ26 1411 aa28.89■■■□□ 2.22
CPE-201ENST00000402744 SPATA31D1Q6ZQQ2 1576 aa28.89■■■□□ 2.22
CPE-201ENST00000402744 ALKQ9UM73 1620 aa28.87■■■□□ 2.21
CPE-201ENST00000402744 WAPLQ7Z5K2 1190 aa28.86■■■□□ 2.21
CPE-201ENST00000402744 PTPRMP28827 1452 aa28.86■■■□□ 2.21
CPE-201ENST00000402744 TRHP20396 242 aaPredicted RBP28.84■■■□□ 2.21
CPE-201ENST00000402744 CEBPAP49715 358 aaPredicted RBP28.84■■■□□ 2.21
CPE-201ENST00000402744 IPO9Q96P70 1041 aaKnown RBP28.84■■■□□ 2.21
CPE-201ENST00000402744 PLEKHH1Q9ULM0 1364 aa28.81■■■□□ 2.2
CPE-201ENST00000402744 CGNL1Q0VF96 1302 aa28.81■■■□□ 2.2
CPE-201ENST00000402744 ANP32AP39687 249 aaKnown RBP28.81■■■□□ 2.2
CPE-201ENST00000402744 CDK19Q9BWU1 502 aa28.79■■■□□ 2.2
CPE-201ENST00000402744 ANKRD36BQ8N2N9 1353 aa28.78■■■□□ 2.2
CPE-201ENST00000402744 TNRQ92752 1358 aa28.78■■■□□ 2.2
CPE-201ENST00000402744 APAF1O14727 1248 aa28.77■■■□□ 2.2
CPE-201ENST00000402744 PLIN1O60240 522 aa28.77■■■□□ 2.2
CPE-201ENST00000402744 A0A1W2PP64 1363 aa28.76■■■□□ 2.2
CPE-201ENST00000402744 PUS7Q96PZ0 661 aaKnown RBP28.76■■■□□ 2.19
CPE-201ENST00000402744 MTHFSP49914 203 aa28.74■■■□□ 2.19
CPE-201ENST00000402744 GGNBP2Q9H3C7 697 aa28.74■■■□□ 2.19
CPE-201ENST00000402744 TXNDC2Q86VQ3 553 aa28.73■■■□□ 2.19
CPE-201ENST00000402744 METP08581 1390 aa28.73■■■□□ 2.19
CPE-201ENST00000402744 CABP1Q9NZU7 370 aa28.72■■■□□ 2.19
CPE-201ENST00000402744 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.71■■■□□ 2.19
CPE-201ENST00000402744 ZBTB47Q9UFB7 747 aaPredicted RBP28.7■■■□□ 2.19
CPE-201ENST00000402744 TCERG1O14776 1098 aaKnown RBP28.69■■■□□ 2.18
CPE-201ENST00000402744 ZNF521Q96K83 1311 aa28.69■■■□□ 2.18
CPE-201ENST00000402744 CRBNQ96SW2 442 aa28.69■■■□□ 2.18
CPE-201ENST00000402744 GOLGA2Q08379 1002 aa28.68■■■□□ 2.18
CPE-201ENST00000402744 DUSP27Q5VZP5 1158 aa28.68■■■□□ 2.18
CPE-201ENST00000402744 ATAD2Q6PL18 1390 aa28.68■■■□□ 2.18
CPE-201ENST00000402744 POLR3AO14802 1390 aaPredicted RBP28.67■■■□□ 2.18
CPE-201ENST00000402744 TERF2IPQ9NYB0 399 aa28.67■■■□□ 2.18
CPE-201ENST00000402744 NEUROD2Q15784 382 aa28.65■■■□□ 2.18
CPE-201ENST00000402744 SPINK5Q9NQ38 1064 aaPredicted RBP28.64■■■□□ 2.18
CPE-201ENST00000402744 RRP7AQ9Y3A4 280 aaKnown RBP28.63■■■□□ 2.17
CPE-201ENST00000402744 TMEM2Q9UHN6 1383 aa28.62■■■□□ 2.17
CPE-201ENST00000402744 FYB1O15117 783 aa28.62■■■□□ 2.17
CPE-201ENST00000402744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.62■■■□□ 2.17
CPE-201ENST00000402744 CD163L1Q9NR16 1453 aa28.62■■■□□ 2.17
CPE-201ENST00000402744 LTKP29376 864 aa28.62■■■□□ 2.17
CPE-201ENST00000402744 HDGFP51858 240 aaKnown RBP28.62■■■□□ 2.17
CPE-201ENST00000402744 DMRT2Q9Y5R5 561 aa28.62■■■□□ 2.17
CPE-201ENST00000402744 ABCC11Q96J66 1382 aa28.61■■■□□ 2.17
CPE-201ENST00000402744 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
CPE-201ENST00000402744 HDGFL2Q7Z4V5 671 aaPredicted RBP28.61■■■□□ 2.17
CPE-201ENST00000402744 NCKAP5LQ9HCH0 1330 aa28.61■■■□□ 2.17
CPE-201ENST00000402744 NINLQ9Y2I6 1382 aa28.6■■■□□ 2.17
CPE-201ENST00000402744 C20orf194Q5TEA3 1177 aa28.59■■■□□ 2.17
CPE-201ENST00000402744 CFAP53Q96M91 514 aa28.59■■■□□ 2.17
CPE-201ENST00000402744 SETD1AO15047 1707 aaKnown RBP28.59■■■□□ 2.17
CPE-201ENST00000402744 SLFN5Q08AF3 891 aa28.59■■■□□ 2.17
CPE-201ENST00000402744 USP32Q8NFA0 1604 aa28.58■■■□□ 2.17
CPE-201ENST00000402744 MS4A1P11836 297 aa28.58■■■□□ 2.17
CPE-201ENST00000402744 NPM2Q86SE8 214 aaKnown RBP28.58■■■□□ 2.17
CPE-201ENST00000402744 FBLN1P23142 703 aa28.57■■■□□ 2.16
CPE-201ENST00000402744 SLC26A8Q96RN1 970 aa28.57■■■□□ 2.16
CPE-201ENST00000402744 NSD2O96028 1365 aa28.57■■■□□ 2.16
CPE-201ENST00000402744 WASLO00401 505 aaPredicted RBP28.55■■■□□ 2.16
CPE-201ENST00000402744 RTL5Q5HYW3 569 aaPredicted RBP28.55■■■□□ 2.16
CPE-201ENST00000402744 U2AF1L5P0DN76 240 aaPredicted RBP28.54■■■□□ 2.16
CPE-201ENST00000402744 PDE4AP27815 886 aa28.54■■■□□ 2.16
CPE-201ENST00000402744 U2AF1Q01081 240 aaKnown RBP eCLIP28.54■■■□□ 2.16
CPE-201ENST00000402744 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.54■■■□□ 2.16
CPE-201ENST00000402744 DLC1Q96QB1 1528 aa28.54■■■□□ 2.16
CPE-201ENST00000402744 TRMT2AQ8IZ69 625 aaKnown RBP28.53■■■□□ 2.16
CPE-201ENST00000402744 UBR1Q8IWV7 1749 aa28.53■■■□□ 2.16
CPE-201ENST00000402744 SHPRHQ149N8 1683 aa28.52■■■□□ 2.16
CPE-201ENST00000402744 NUTM2FA1L443 756 aa28.52■■■□□ 2.16
CPE-201ENST00000402744 TCP11L2Q8N4U5 519 aa28.52■■■□□ 2.16
CPE-201ENST00000402744 U2SURPO15042 1029 aaKnown RBP28.51■■■□□ 2.15
CPE-201ENST00000402744 RUNDC1Q96C34 613 aa28.51■■■□□ 2.15
CPE-201ENST00000402744 BACH2Q9BYV9 841 aa28.5■■■□□ 2.15
CPE-201ENST00000402744 WWC1Q8IX03 1113 aa28.5■■■□□ 2.15
CPE-201ENST00000402744 PPM1GO15355 546 aaPredicted RBP28.49■■■□□ 2.15
CPE-201ENST00000402744 ROBO2Q9HCK4 1378 aa28.49■■■□□ 2.15
CPE-201ENST00000402744 NGEFQ8N5V2 710 aa28.49■■■□□ 2.15
CPE-201ENST00000402744 NUDT16Q96DE0 195 aaKnown RBP28.49■■■□□ 2.15
CPE-201ENST00000402744 NKTRP30414 1462 aaKnown RBP28.48■■■□□ 2.15
CPE-201ENST00000402744 ADAMTS13Q76LX8 1427 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms