RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 E9PCH4 1651 aa9.85□□□□□ -0.83
HDAC9-201ENST00000401921 TERF2IPQ9NYB0 399 aa9.85□□□□□ -0.83
HDAC9-201ENST00000401921 TRPM2O94759 1503 aa9.85□□□□□ -0.83
HDAC9-201ENST00000401921 ZFYVE16Q7Z3T8 1539 aa9.85□□□□□ -0.83
HDAC9-201ENST00000401921 HDGFL2Q7Z4V5 671 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-201ENST00000401921 TSR2Q969E8 191 aaKnown RBP9.85□□□□□ -0.83
HDAC9-201ENST00000401921 PRAM1Q96QH2 718 aa9.85□□□□□ -0.83
HDAC9-201ENST00000401921 PTPRTO14522 1441 aa9.84□□□□□ -0.83
HDAC9-201ENST00000401921 CLTCL1P53675 1640 aa9.84□□□□□ -0.83
HDAC9-201ENST00000401921 SHROOM2Q13796 1616 aa9.84□□□□□ -0.83
HDAC9-201ENST00000401921 PIK3C2GO75747 1445 aa9.84□□□□□ -0.83
HDAC9-201ENST00000401921 NKTRP30414 1462 aaKnown RBP9.84□□□□□ -0.83
HDAC9-201ENST00000401921 IGHDP01880 384 aa9.83□□□□□ -0.84
HDAC9-201ENST00000401921 FBXO31Q5XUX0 539 aaPredicted RBP9.83□□□□□ -0.84
HDAC9-201ENST00000401921 ITPRIPQ8IWB1 547 aa9.83□□□□□ -0.84
HDAC9-201ENST00000401921 NGEFQ8N5V2 710 aa9.83□□□□□ -0.84
HDAC9-201ENST00000401921 TNNQ9UQP3 1299 aa9.83□□□□□ -0.84
HDAC9-201ENST00000401921 ZNF518AQ6AHZ1 1483 aa9.82□□□□□ -0.84
HDAC9-201ENST00000401921 GLIPR1L2Q4G1C9 344 aa9.82□□□□□ -0.84
HDAC9-201ENST00000401921 SPRYD3Q8NCJ5 442 aa9.82□□□□□ -0.84
HDAC9-201ENST00000401921 FAM69CQ0P6D2 419 aa9.82□□□□□ -0.84
HDAC9-201ENST00000401921 PDE3AQ14432 1141 aa9.82□□□□□ -0.84
HDAC9-201ENST00000401921 SLKQ9H2G2 1235 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-201ENST00000401921 MADDQ8WXG6 1647 aa9.82□□□□□ -0.84
HDAC9-201ENST00000401921 ERVK-7P63135 1459 aa9.82□□□□□ -0.84
HDAC9-201ENST00000401921 RPGRIP1LQ68CZ1 1315 aa9.82□□□□□ -0.84
HDAC9-201ENST00000401921 ZNF521Q96K83 1311 aa9.82□□□□□ -0.84
HDAC9-201ENST00000401921 ELL2O00472 640 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-201ENST00000401921 SOX12O15370 315 aa9.81□□□□□ -0.84
HDAC9-201ENST00000401921 PMFBP1Q8TBY8 1022 aa9.81□□□□□ -0.84
HDAC9-201ENST00000401921 NUTM2FA1L443 756 aa9.81□□□□□ -0.84
HDAC9-201ENST00000401921 FBLN1P23142 703 aa9.81□□□□□ -0.84
HDAC9-201ENST00000401921 RARSP54136 660 aaKnown RBP9.81□□□□□ -0.84
HDAC9-201ENST00000401921 RIPK4P57078 832 aa9.81□□□□□ -0.84
HDAC9-201ENST00000401921 ARXQ96QS3 562 aa9.81□□□□□ -0.84
HDAC9-201ENST00000401921 RWDD1Q9H446 243 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-201ENST00000401921 EXOSC9Q06265 439 aaKnown RBP9.81□□□□□ -0.84
HDAC9-201ENST00000401921 CABP1Q9NZU7 370 aa9.81□□□□□ -0.84
HDAC9-201ENST00000401921 SPHKAPQ2M3C7 1700 aa9.81□□□□□ -0.84
HDAC9-201ENST00000401921 NPC1L1Q9UHC9 1359 aa9.8□□□□□ -0.84
HDAC9-201ENST00000401921 ZKSCAN2Q63HK3 967 aa9.8□□□□□ -0.84
HDAC9-201ENST00000401921 NPATQ14207 1427 aa9.8□□□□□ -0.84
HDAC9-201ENST00000401921 DIAPH1O60610 1272 aaKnown RBP9.8□□□□□ -0.84
HDAC9-201ENST00000401921 HMOX1P09601 288 aa9.8□□□□□ -0.84
HDAC9-201ENST00000401921 BECN1Q14457 450 aa9.8□□□□□ -0.84
HDAC9-201ENST00000401921 INSRP06213 1382 aa9.79□□□□□ -0.84
HDAC9-201ENST00000401921 KDM2BQ8NHM5 1336 aa9.79□□□□□ -0.84
HDAC9-201ENST00000401921 DZIP1LQ8IYY4 767 aaKnown RBP9.79□□□□□ -0.84
HDAC9-201ENST00000401921 SLC52A1Q9NWF4 448 aa9.79□□□□□ -0.84
HDAC9-201ENST00000401921 TET3O43151 1660 aa9.79□□□□□ -0.84
HDAC9-201ENST00000401921 WDR63Q8IWG1 891 aa9.79□□□□□ -0.84
HDAC9-201ENST00000401921 CDK19Q9BWU1 502 aa9.79□□□□□ -0.84
HDAC9-201ENST00000401921 KDM5AP29375 1690 aaKnown RBP9.79□□□□□ -0.84
HDAC9-201ENST00000401921 CLASP1Q7Z460 1538 aa9.78□□□□□ -0.84
HDAC9-201ENST00000401921 WAPLQ7Z5K2 1190 aa9.78□□□□□ -0.84
HDAC9-201ENST00000401921 POLR3AO14802 1390 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-201ENST00000401921 SYNMO15061 1565 aa9.78□□□□□ -0.84
HDAC9-201ENST00000401921 LAMC1P11047 1609 aa9.78□□□□□ -0.84
HDAC9-201ENST00000401921 NFKBIBQ15653 356 aa9.78□□□□□ -0.84
HDAC9-201ENST00000401921 PDZRN3Q9UPQ7 1066 aa9.78□□□□□ -0.84
HDAC9-201ENST00000401921 RLBP1P12271 317 aa9.78□□□□□ -0.84
HDAC9-201ENST00000401921 C8orf34Q49A92 452 aa9.78□□□□□ -0.84
HDAC9-201ENST00000401921 TRMT2AQ8IZ69 625 aaKnown RBP9.77□□□□□ -0.85
HDAC9-201ENST00000401921 KIF1BO60333 1816 aa9.77□□□□□ -0.85
HDAC9-201ENST00000401921 TMPOP42166 694 aaKnown RBP9.77□□□□□ -0.85
HDAC9-201ENST00000401921 PNNQ9H307 717 aaKnown RBP9.77□□□□□ -0.85
HDAC9-201ENST00000401921 MFAP1P55081 439 aaKnown RBP9.76□□□□□ -0.85
HDAC9-201ENST00000401921 PCDHB15Q9Y5E8 787 aa9.76□□□□□ -0.85
HDAC9-201ENST00000401921 USP35Q9P2H5 1018 aa9.76□□□□□ -0.85
HDAC9-201ENST00000401921 MAP3K4Q9Y6R4 1608 aa9.75□□□□□ -0.85
HDAC9-201ENST00000401921 FYB1O15117 783 aa9.75□□□□□ -0.85
HDAC9-201ENST00000401921 PRKAR2BP31323 418 aa9.75□□□□□ -0.85
HDAC9-201ENST00000401921 IPO8O15397 1037 aaKnown RBP9.75□□□□□ -0.85
HDAC9-201ENST00000401921 CEP152O94986 1710 aa9.75□□□□□ -0.85
HDAC9-201ENST00000401921 TXNDC2Q86VQ3 553 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 THUMPD2Q9BTF0 503 aaKnown RBP9.74□□□□□ -0.85
HDAC9-201ENST00000401921 NOB1Q9ULX3 412 aaKnown RBP9.74□□□□□ -0.85
HDAC9-201ENST00000401921 IQGAP1P46940 1657 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 SSH1Q8WYL5 1049 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 ANKRD36BQ8N2N9 1353 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 MYOM2P54296 1465 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 ABCA6Q8N139 1617 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 FRAT2O75474 233 aaPredicted RBP9.74□□□□□ -0.85
HDAC9-201ENST00000401921 SEC24BO95487 1268 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 MVPQ14764 893 aaKnown RBP9.74□□□□□ -0.85
HDAC9-201ENST00000401921 VSIG10Q8N0Z9 540 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 POGZQ7Z3K3 1410 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 EFCAB6Q5THR3 1501 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 ARAP3Q8WWN8 1544 aa9.74□□□□□ -0.85
HDAC9-201ENST00000401921 RNF17Q9BXT8 1623 aaKnown RBP9.74□□□□□ -0.85
HDAC9-201ENST00000401921 A0A1W2PP64 1363 aa9.73□□□□□ -0.85
HDAC9-201ENST00000401921 HSP90AA1P07900 732 aaKnown RBP9.73□□□□□ -0.85
HDAC9-201ENST00000401921 SBNO2Q9Y2G9 1366 aa9.73□□□□□ -0.85
HDAC9-201ENST00000401921 DDX19BQ9UMR2 479 aa9.73□□□□□ -0.85
HDAC9-201ENST00000401921 LNPKQ9C0E8 428 aa9.72□□□□□ -0.85
HDAC9-201ENST00000401921 ABCA9Q8IUA7 1624 aa9.72□□□□□ -0.85
HDAC9-201ENST00000401921 INO80Q9ULG1 1556 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-201ENST00000401921 ATAD2Q6PL18 1390 aa9.71□□□□□ -0.85
HDAC9-201ENST00000401921 TRIM27P14373 513 aa9.71□□□□□ -0.85
HDAC9-201ENST00000401921 GSE1Q14687 1217 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms