RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 IGSF5Q9NSI5 407 aa5.38□□□□□ -1.55
CLHC1-201ENST00000401408 ONECUT3O60422 494 aaPredicted RBP5.38□□□□□ -1.55
CLHC1-201ENST00000401408 BRD1O95696 1058 aa5.38□□□□□ -1.55
CLHC1-201ENST00000401408 CFAP74Q9C0B2 1584 aa5.37□□□□□ -1.55
CLHC1-201ENST00000401408 CLSPNQ9HAW4 1339 aa5.37□□□□□ -1.55
CLHC1-201ENST00000401408 PATL2C9JE40 543 aaKnown RBP5.37□□□□□ -1.55
CLHC1-201ENST00000401408 GOLGA3Q08378 1498 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 RAPGEF2Q9Y4G8 1499 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 MARCH6O60337 910 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 MKRN4PQ13434 485 aaPredicted RBP5.36□□□□□ -1.55
CLHC1-201ENST00000401408 GPATCH11Q8N954 259 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 RGS17Q9UGC6 210 aaPredicted RBP5.36□□□□□ -1.55
CLHC1-201ENST00000401408 REREQ9P2R6 1566 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 SEMA3EO15041 775 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 HSPA1LP34931 641 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 CEBPAP49715 358 aaPredicted RBP5.36□□□□□ -1.55
CLHC1-201ENST00000401408 MYH16Q9H6N6 1097 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 ATP10AO60312 1499 aa5.35□□□□□ -1.55
CLHC1-201ENST00000401408 DNAJC2Q99543 621 aaKnown RBP5.35□□□□□ -1.55
CLHC1-201ENST00000401408 TCOF1Q13428 1488 aaKnown RBP5.35□□□□□ -1.55
CLHC1-201ENST00000401408 ANKRD62A6NC57 917 aa5.35□□□□□ -1.55
CLHC1-201ENST00000401408 UBAP1LF5GYI3 381 aa5.35□□□□□ -1.55
CLHC1-201ENST00000401408 FAM117AQ9C073 453 aa5.35□□□□□ -1.55
CLHC1-201ENST00000401408 ARIH1Q9Y4X5 557 aaPredicted RBP5.35□□□□□ -1.55
CLHC1-201ENST00000401408 ZNF142P52746 1687 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-201ENST00000401408 C9orf84Q5VXU9 1444 aa5.34□□□□□ -1.55
CLHC1-201ENST00000401408 CAMSAP1Q5T5Y3 1602 aa5.34□□□□□ -1.55
CLHC1-201ENST00000401408 TESPA1A2RU30 521 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-201ENST00000401408 MCCP23508 829 aa5.34□□□□□ -1.55
CLHC1-201ENST00000401408 PROSER2Q86WR7 435 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-201ENST00000401408 ZNF335Q9H4Z2 1342 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-201ENST00000401408 TRAPPC8Q9Y2L5 1435 aa5.34□□□□□ -1.56
CLHC1-201ENST00000401408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.34□□□□□ -1.56
CLHC1-201ENST00000401408 TIE1P35590 1138 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 FAM50AQ14320 339 aaKnown RBP5.33□□□□□ -1.56
CLHC1-201ENST00000401408 PLA2R1Q13018 1463 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 AGLP35573 1532 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 GRIPAP1Q4V328 841 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 IER5LQ5T953 404 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 RNF25Q96BH1 459 aaPredicted RBP5.33□□□□□ -1.56
CLHC1-201ENST00000401408 DRC1Q96MC2 740 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 PPME1Q9Y570 386 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 ZC3H4Q9UPT8 1303 aaKnown RBP5.33□□□□□ -1.56
CLHC1-201ENST00000401408 KDM5CP41229 1560 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 RBM10P98175 930 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 PDE4DQ08499 809 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 KCNA1Q09470 495 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 LAS1LQ9Y4W2 734 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 MROH2AA6NES4 1674 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 NUP153P49790 1475 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 RAPGEF6Q8TEU7 1601 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 TPD52L2O43399 206 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 GORABQ5T7V8 394 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 KRI1Q8N9T8 703 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 HIRIP3Q9BW71 556 aaPredicted RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 NPATQ14207 1427 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 SAMD9Q5K651 1589 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 SPTY2D1Q68D10 685 aaPredicted RBP5.31□□□□□ -1.56
CLHC1-201ENST00000401408 DIP2CQ9Y2E4 1556 aa5.31□□□□□ -1.56
CLHC1-201ENST00000401408 MLECQ14165 292 aa5.31□□□□□ -1.56
CLHC1-201ENST00000401408 WWC1Q8IX03 1113 aa5.31□□□□□ -1.56
CLHC1-201ENST00000401408 ARHGEF1Q92888 912 aaKnown RBP5.31□□□□□ -1.56
CLHC1-201ENST00000401408 RBM27Q9P2N5 1060 aaKnown RBP5.31□□□□□ -1.56
CLHC1-201ENST00000401408 TMTC2Q8N394 836 aa5.3□□□□□ -1.56
CLHC1-201ENST00000401408 PLCD3Q8N3E9 789 aa5.3□□□□□ -1.56
CLHC1-201ENST00000401408 SIRT1Q96EB6 747 aa5.3□□□□□ -1.56
CLHC1-201ENST00000401408 CPS1P31327 1500 aa5.3□□□□□ -1.56
CLHC1-201ENST00000401408 PLEKHG3A1L390 1219 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 TTLL13PA6NNM8 815 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 TRIM66O15016 1216 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 OS9Q13438 667 aaPredicted RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 FAM43BQ6ZT52 329 aaPredicted RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 CADPS2Q86UW7 1296 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 SREK1Q8WXA9 508 aaKnown RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 ABCA6Q8N139 1617 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 CHRM1P11229 460 aaPredicted RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 FNBP4Q8N3X1 1017 aaPredicted RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 MICAL1Q8TDZ2 1067 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 SUGT1Q9Y2Z0 365 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 NEURL4Q96JN8 1562 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 MYO3AQ8NEV4 1616 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 PLCH2O75038 1416 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 SCAPERQ9BY12 1400 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 VWDEQ8N2E2 1590 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 STK25O00506 426 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 NEFMP07197 916 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 MCM6Q14566 821 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 ACIN1Q9UKV3 1341 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 SETD1AO15047 1707 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 PTMAP06454 111 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 SND1Q7KZF4 910 aaKnown RBP eCLIP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 SGSM3Q96HU1 749 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 KIAA1522Q9P206 1035 aaPredicted RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 PPP1R1BQ9UD71 204 aaPredicted RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 SUPT6HQ7KZ85 1726 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 CEP170BQ9Y4F5 1589 aaPredicted RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 POLR1AO95602 1720 aaPredicted RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 RBM47A0AV96 593 aaKnown RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 PPP1R15AO75807 674 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms