RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 IGSF5Q9NSI5 407 aa5.38□□□□□ -1.55
CLHC1-201ENST00000401408 ONECUT3O60422 494 aaPredicted RBP5.38□□□□□ -1.55
CLHC1-201ENST00000401408 BRD1O95696 1058 aa5.38□□□□□ -1.55
CLHC1-201ENST00000401408 CFAP74Q9C0B2 1584 aa5.37□□□□□ -1.55
CLHC1-201ENST00000401408 CLSPNQ9HAW4 1339 aa5.37□□□□□ -1.55
CLHC1-201ENST00000401408 PATL2C9JE40 543 aaKnown RBP5.37□□□□□ -1.55
CLHC1-201ENST00000401408 GOLGA3Q08378 1498 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 RAPGEF2Q9Y4G8 1499 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 MARCH6O60337 910 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 MKRN4PQ13434 485 aaPredicted RBP5.36□□□□□ -1.55
CLHC1-201ENST00000401408 GPATCH11Q8N954 259 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 RGS17Q9UGC6 210 aaPredicted RBP5.36□□□□□ -1.55
CLHC1-201ENST00000401408 REREQ9P2R6 1566 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 SEMA3EO15041 775 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 HSPA1LP34931 641 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 CEBPAP49715 358 aaPredicted RBP5.36□□□□□ -1.55
CLHC1-201ENST00000401408 MYH16Q9H6N6 1097 aa5.36□□□□□ -1.55
CLHC1-201ENST00000401408 ATP10AO60312 1499 aa5.35□□□□□ -1.55
CLHC1-201ENST00000401408 DNAJC2Q99543 621 aaKnown RBP5.35□□□□□ -1.55
CLHC1-201ENST00000401408 TCOF1Q13428 1488 aaKnown RBP5.35□□□□□ -1.55
CLHC1-201ENST00000401408 ANKRD62A6NC57 917 aa5.35□□□□□ -1.55
CLHC1-201ENST00000401408 UBAP1LF5GYI3 381 aa5.35□□□□□ -1.55
CLHC1-201ENST00000401408 FAM117AQ9C073 453 aa5.35□□□□□ -1.55
CLHC1-201ENST00000401408 ARIH1Q9Y4X5 557 aaPredicted RBP5.35□□□□□ -1.55
CLHC1-201ENST00000401408 ZNF142P52746 1687 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-201ENST00000401408 C9orf84Q5VXU9 1444 aa5.34□□□□□ -1.55
CLHC1-201ENST00000401408 CAMSAP1Q5T5Y3 1602 aa5.34□□□□□ -1.55
CLHC1-201ENST00000401408 TESPA1A2RU30 521 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-201ENST00000401408 MCCP23508 829 aa5.34□□□□□ -1.55
CLHC1-201ENST00000401408 PROSER2Q86WR7 435 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-201ENST00000401408 ZNF335Q9H4Z2 1342 aaPredicted RBP5.34□□□□□ -1.55
CLHC1-201ENST00000401408 TRAPPC8Q9Y2L5 1435 aa5.34□□□□□ -1.56
CLHC1-201ENST00000401408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.34□□□□□ -1.56
CLHC1-201ENST00000401408 TIE1P35590 1138 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 FAM50AQ14320 339 aaKnown RBP5.33□□□□□ -1.56
CLHC1-201ENST00000401408 PLA2R1Q13018 1463 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 AGLP35573 1532 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 GRIPAP1Q4V328 841 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 IER5LQ5T953 404 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 RNF25Q96BH1 459 aaPredicted RBP5.33□□□□□ -1.56
CLHC1-201ENST00000401408 DRC1Q96MC2 740 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 PPME1Q9Y570 386 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 ZC3H4Q9UPT8 1303 aaKnown RBP5.33□□□□□ -1.56
CLHC1-201ENST00000401408 KDM5CP41229 1560 aa5.33□□□□□ -1.56
CLHC1-201ENST00000401408 RBM10P98175 930 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 PDE4DQ08499 809 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 KCNA1Q09470 495 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 LAS1LQ9Y4W2 734 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 MROH2AA6NES4 1674 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 NUP153P49790 1475 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 RAPGEF6Q8TEU7 1601 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 TPD52L2O43399 206 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 GORABQ5T7V8 394 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 KRI1Q8N9T8 703 aaKnown RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 HIRIP3Q9BW71 556 aaPredicted RBP5.32□□□□□ -1.56
CLHC1-201ENST00000401408 NPATQ14207 1427 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 SAMD9Q5K651 1589 aa5.32□□□□□ -1.56
CLHC1-201ENST00000401408 SPTY2D1Q68D10 685 aaPredicted RBP5.31□□□□□ -1.56
CLHC1-201ENST00000401408 DIP2CQ9Y2E4 1556 aa5.31□□□□□ -1.56
CLHC1-201ENST00000401408 MLECQ14165 292 aa5.31□□□□□ -1.56
CLHC1-201ENST00000401408 WWC1Q8IX03 1113 aa5.31□□□□□ -1.56
CLHC1-201ENST00000401408 ARHGEF1Q92888 912 aaKnown RBP5.31□□□□□ -1.56
CLHC1-201ENST00000401408 RBM27Q9P2N5 1060 aaKnown RBP5.31□□□□□ -1.56
CLHC1-201ENST00000401408 TMTC2Q8N394 836 aa5.3□□□□□ -1.56
CLHC1-201ENST00000401408 PLCD3Q8N3E9 789 aa5.3□□□□□ -1.56
CLHC1-201ENST00000401408 SIRT1Q96EB6 747 aa5.3□□□□□ -1.56
CLHC1-201ENST00000401408 CPS1P31327 1500 aa5.3□□□□□ -1.56
CLHC1-201ENST00000401408 PLEKHG3A1L390 1219 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 TTLL13PA6NNM8 815 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 TRIM66O15016 1216 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 OS9Q13438 667 aaPredicted RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 FAM43BQ6ZT52 329 aaPredicted RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 CADPS2Q86UW7 1296 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 SREK1Q8WXA9 508 aaKnown RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 ABCA6Q8N139 1617 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 CHRM1P11229 460 aaPredicted RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 FNBP4Q8N3X1 1017 aaPredicted RBP5.29□□□□□ -1.56
CLHC1-201ENST00000401408 MICAL1Q8TDZ2 1067 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 SUGT1Q9Y2Z0 365 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 NEURL4Q96JN8 1562 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 MYO3AQ8NEV4 1616 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 PLCH2O75038 1416 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 SCAPERQ9BY12 1400 aa5.29□□□□□ -1.56
CLHC1-201ENST00000401408 VWDEQ8N2E2 1590 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 STK25O00506 426 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 NEFMP07197 916 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 MCM6Q14566 821 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 ACIN1Q9UKV3 1341 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 SETD1AO15047 1707 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 PTMAP06454 111 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 SND1Q7KZF4 910 aaKnown RBP eCLIP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 SGSM3Q96HU1 749 aa5.28□□□□□ -1.56
CLHC1-201ENST00000401408 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 KIAA1522Q9P206 1035 aaPredicted RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 PPP1R1BQ9UD71 204 aaPredicted RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 SUPT6HQ7KZ85 1726 aaKnown RBP5.28□□□□□ -1.56
CLHC1-201ENST00000401408 CEP170BQ9Y4F5 1589 aaPredicted RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 POLR1AO95602 1720 aaPredicted RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 RBM47A0AV96 593 aaKnown RBP5.27□□□□□ -1.57
CLHC1-201ENST00000401408 PPP1R15AO75807 674 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms