RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 CFAP70Q5T0N1 1121 aa22.67■■□□□ 1.22
ATG4B-202ENST00000400771 USP32Q8NFA0 1604 aa22.64■■□□□ 1.22
ATG4B-202ENST00000400771 ILDR2Q71H61 639 aa22.64■■□□□ 1.21
ATG4B-202ENST00000400771 LRP6O75581 1613 aa22.64■■□□□ 1.21
ATG4B-202ENST00000400771 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
ATG4B-202ENST00000400771 STK26Q9P289 416 aa22.62■■□□□ 1.21
ATG4B-202ENST00000400771 JCADQ9P266 1359 aa22.62■■□□□ 1.21
ATG4B-202ENST00000400771 WAPLQ7Z5K2 1190 aa22.61■■□□□ 1.21
ATG4B-202ENST00000400771 DCAF11Q8TEB1 546 aa22.61■■□□□ 1.21
ATG4B-202ENST00000400771 TRPM1Q7Z4N2 1603 aa22.59■■□□□ 1.21
ATG4B-202ENST00000400771 COL22A1Q8NFW1 1626 aaPredicted RBP22.57■■□□□ 1.2
ATG4B-202ENST00000400771 PXDNQ92626 1479 aa22.56■■□□□ 1.2
ATG4B-202ENST00000400771 SIRT1Q96EB6 747 aa22.56■■□□□ 1.2
ATG4B-202ENST00000400771 KDM2AQ9Y2K7 1162 aa22.56■■□□□ 1.2
ATG4B-202ENST00000400771 STAC3Q96MF2 364 aa22.55■■□□□ 1.2
ATG4B-202ENST00000400771 DDX17Q92841 729 aaKnown RBP22.54■■□□□ 1.2
ATG4B-202ENST00000400771 ORAI2Q96SN7 254 aa22.53■■□□□ 1.2
ATG4B-202ENST00000400771 TOPAZ1Q8N9V7 1692 aa22.51■■□□□ 1.19
ATG4B-202ENST00000400771 ITSN1Q15811 1721 aa22.51■■□□□ 1.19
ATG4B-202ENST00000400771 MARF1Q9Y4F3 1742 aaKnown RBP22.51■■□□□ 1.19
ATG4B-202ENST00000400771 PNPLA6Q8IY17 1366 aa22.5■■□□□ 1.19
ATG4B-202ENST00000400771 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
ATG4B-202ENST00000400771 PRAM1Q96QH2 718 aa22.5■■□□□ 1.19
ATG4B-202ENST00000400771 RGS17Q9UGC6 210 aaPredicted RBP22.5■■□□□ 1.19
ATG4B-202ENST00000400771 ABCA3Q99758 1704 aa22.49■■□□□ 1.19
ATG4B-202ENST00000400771 QRICH2Q9H0J4 1663 aa22.49■■□□□ 1.19
ATG4B-202ENST00000400771 TULP4Q9NRJ4 1543 aa22.48■■□□□ 1.19
ATG4B-202ENST00000400771 SOS2Q07890 1332 aaPredicted RBP22.48■■□□□ 1.19
ATG4B-202ENST00000400771 SPATA31A6Q5VVP1 1343 aa22.48■■□□□ 1.19
ATG4B-202ENST00000400771 TRPM3Q9HCF6 1732 aaPredicted RBP22.48■■□□□ 1.19
ATG4B-202ENST00000400771 SIN3AQ96ST3 1273 aa22.47■■□□□ 1.19
ATG4B-202ENST00000400771 ANKARQ7Z5J8 1434 aa22.46■■□□□ 1.19
ATG4B-202ENST00000400771 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
ATG4B-202ENST00000400771 TRAK1Q9UPV9 953 aa22.45■■□□□ 1.18
ATG4B-202ENST00000400771 SAFB2Q14151 953 aaKnown RBP eCLIP22.44■■□□□ 1.18
ATG4B-202ENST00000400771 NUTM2FA1L443 756 aa22.43■■□□□ 1.18
ATG4B-202ENST00000400771 L3MBTL2Q969R5 705 aa22.43■■□□□ 1.18
ATG4B-202ENST00000400771 ATP7BP35670 1465 aa22.42■■□□□ 1.18
ATG4B-202ENST00000400771 CRYBG1Q9Y4K1 1723 aa22.41■■□□□ 1.18
ATG4B-202ENST00000400771 ESCO1Q5FWF5 840 aa22.41■■□□□ 1.18
ATG4B-202ENST00000400771 ALS2Q96Q42 1657 aa22.41■■□□□ 1.18
ATG4B-202ENST00000400771 NPHP3Q7Z494 1330 aa22.4■■□□□ 1.18
ATG4B-202ENST00000400771 NBPF1Q3BBV0 1214 aa22.4■■□□□ 1.18
ATG4B-202ENST00000400771 LRRC59Q96AG4 307 aaKnown RBP22.4■■□□□ 1.18
ATG4B-202ENST00000400771 POGKQ9P215 609 aa22.39■■□□□ 1.17
ATG4B-202ENST00000400771 MINK1Q8N4C8 1332 aaPredicted RBP22.37■■□□□ 1.17
ATG4B-202ENST00000400771 PRR36Q9H6K5 1346 aa22.37■■□□□ 1.17
ATG4B-202ENST00000400771 HIRIP3Q9BW71 556 aaPredicted RBP22.36■■□□□ 1.17
ATG4B-202ENST00000400771 FOXO3O43524 673 aa22.35■■□□□ 1.17
ATG4B-202ENST00000400771 POTEAQ6S8J7 498 aa22.35■■□□□ 1.17
ATG4B-202ENST00000400771 SOCS7O14512 581 aa22.34■■□□□ 1.17
ATG4B-202ENST00000400771 XPCQ01831 940 aaPredicted RBP22.34■■□□□ 1.17
ATG4B-202ENST00000400771 EIF3AQ14152 1382 aaKnown RBP22.34■■□□□ 1.17
ATG4B-202ENST00000400771 TNS3Q68CZ2 1445 aa22.33■■□□□ 1.17
ATG4B-202ENST00000400771 NEUROD1Q13562 356 aa22.33■■□□□ 1.17
ATG4B-202ENST00000400771 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.32■■□□□ 1.16
ATG4B-202ENST00000400771 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
ATG4B-202ENST00000400771 GPRASP1Q5JY77 1395 aa22.31■■□□□ 1.16
ATG4B-202ENST00000400771 WASLO00401 505 aaPredicted RBP22.31■■□□□ 1.16
ATG4B-202ENST00000400771 PHF8Q9UPP1 1060 aa22.31■■□□□ 1.16
ATG4B-202ENST00000400771 NUTM2BA6NNL0 878 aaPredicted RBP22.3■■□□□ 1.16
ATG4B-202ENST00000400771 NUTM2EB1AL46 878 aaPredicted RBP22.3■■□□□ 1.16
ATG4B-202ENST00000400771 NUTM2AQ8IVF1 878 aaPredicted RBP22.3■■□□□ 1.16
ATG4B-202ENST00000400771 PLCH1Q4KWH8 1693 aa22.3■■□□□ 1.16
ATG4B-202ENST00000400771 SPATA31A3Q5VYP0 1347 aa22.29■■□□□ 1.16
ATG4B-202ENST00000400771 NBPF8Q3BBV2 869 aa22.28■■□□□ 1.16
ATG4B-202ENST00000400771 MEX3CQ5U5Q3 659 aaKnown RBP22.27■■□□□ 1.16
ATG4B-202ENST00000400771 PHRF1Q9P1Y6 1649 aaKnown RBP22.27■■□□□ 1.16
ATG4B-202ENST00000400771 SBNO1A3KN83 1393 aa22.26■■□□□ 1.15
ATG4B-202ENST00000400771 ROCK2O75116 1388 aaKnown RBP22.25■■□□□ 1.15
ATG4B-202ENST00000400771 AFF2P51816 1311 aa22.25■■□□□ 1.15
ATG4B-202ENST00000400771 CENPJQ9HC77 1338 aaPredicted RBP22.25■■□□□ 1.15
ATG4B-202ENST00000400771 AKAP12Q02952 1782 aa22.24■■□□□ 1.15
ATG4B-202ENST00000400771 TONSLQ96HA7 1378 aa22.24■■□□□ 1.15
ATG4B-202ENST00000400771 NWD2Q9ULI1 1742 aa22.23■■□□□ 1.15
ATG4B-202ENST00000400771 KRT28Q7Z3Y7 464 aa22.23■■□□□ 1.15
ATG4B-202ENST00000400771 PMFBP1Q8TBY8 1022 aa22.23■■□□□ 1.15
ATG4B-202ENST00000400771 NRAPQ86VF7 1730 aa22.23■■□□□ 1.15
ATG4B-202ENST00000400771 POLR3AO14802 1390 aaPredicted RBP22.21■■□□□ 1.15
ATG4B-202ENST00000400771 C8orf37Q96NL8 207 aa22.2■■□□□ 1.14
ATG4B-202ENST00000400771 CDK12Q9NYV4 1490 aaPredicted RBP22.2■■□□□ 1.14
ATG4B-202ENST00000400771 NRKQ7Z2Y5 1582 aa22.2■■□□□ 1.14
ATG4B-202ENST00000400771 ADAMTS2O95450 1211 aa22.19■■□□□ 1.14
ATG4B-202ENST00000400771 ZNF772Q68DY9 489 aaPredicted RBP22.19■■□□□ 1.14
ATG4B-202ENST00000400771 NUDT16Q96DE0 195 aaKnown RBP22.19■■□□□ 1.14
ATG4B-202ENST00000400771 CDK19Q9BWU1 502 aa22.19■■□□□ 1.14
ATG4B-202ENST00000400771 ARHGEF10O15013 1369 aa22.18■■□□□ 1.14
ATG4B-202ENST00000400771 SLIT2O94813 1529 aa22.17■■□□□ 1.14
ATG4B-202ENST00000400771 BCL9LQ86UU0 1499 aa22.16■■□□□ 1.14
ATG4B-202ENST00000400771 ATRNO75882 1429 aa22.16■■□□□ 1.14
ATG4B-202ENST00000400771 MON2Q7Z3U7 1717 aa22.16■■□□□ 1.14
ATG4B-202ENST00000400771 RGS12O14924 1447 aa22.15■■□□□ 1.14
ATG4B-202ENST00000400771 PPIP5K1Q6PFW1 1433 aa22.15■■□□□ 1.14
ATG4B-202ENST00000400771 SBNO2Q9Y2G9 1366 aa22.15■■□□□ 1.14
ATG4B-202ENST00000400771 COL14A1Q05707 1796 aaKnown RBP22.15■■□□□ 1.14
ATG4B-202ENST00000400771 GLI3P10071 1580 aa22.14■■□□□ 1.13
ATG4B-202ENST00000400771 PSME1Q06323 249 aa22.14■■□□□ 1.13
ATG4B-202ENST00000400771 PIK3C2AO00443 1686 aa22.14■■□□□ 1.13
ATG4B-202ENST00000400771 FNBP4Q8N3X1 1017 aaPredicted RBP22.12■■□□□ 1.13
ATG4B-202ENST00000400771 PLEKHG3A1L390 1219 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms