RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 NPC1L1Q9UHC9 1359 aa13.53□□□□□ -0.24
PPP4R1-203ENST00000400556 GGNBP2Q9H3C7 697 aa13.53□□□□□ -0.24
PPP4R1-203ENST00000400556 FTSJ3Q8IY81 847 aaKnown RBP13.52□□□□□ -0.24
PPP4R1-203ENST00000400556 ADGRL1O94910 1474 aa13.52□□□□□ -0.24
PPP4R1-203ENST00000400556 ATP7AQ04656 1500 aa13.52□□□□□ -0.25
PPP4R1-203ENST00000400556 FBLN1P23142 703 aa13.52□□□□□ -0.25
PPP4R1-203ENST00000400556 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-203ENST00000400556 POLR3AO14802 1390 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-203ENST00000400556 MFAP1P55081 439 aaKnown RBP13.51□□□□□ -0.25
PPP4R1-203ENST00000400556 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
PPP4R1-203ENST00000400556 CLASP1Q7Z460 1538 aa13.51□□□□□ -0.25
PPP4R1-203ENST00000400556 SHROOM2Q13796 1616 aa13.51□□□□□ -0.25
PPP4R1-203ENST00000400556 EIF5BO60841 1220 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-203ENST00000400556 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
PPP4R1-203ENST00000400556 STAC3Q96MF2 364 aa13.5□□□□□ -0.25
PPP4R1-203ENST00000400556 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
PPP4R1-203ENST00000400556 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-203ENST00000400556 SRPK2P78362 688 aaKnown RBP13.49□□□□□ -0.25
PPP4R1-203ENST00000400556 ITPRIPQ8IWB1 547 aa13.49□□□□□ -0.25
PPP4R1-203ENST00000400556 MAP3K4Q9Y6R4 1608 aa13.49□□□□□ -0.25
PPP4R1-203ENST00000400556 RTEL1-TNFRSF6BF6WH68 1400 aa13.49□□□□□ -0.25
PPP4R1-203ENST00000400556 TET3O43151 1660 aa13.49□□□□□ -0.25
PPP4R1-203ENST00000400556 BECN1Q14457 450 aa13.48□□□□□ -0.25
PPP4R1-203ENST00000400556 PMFBP1Q8TBY8 1022 aa13.48□□□□□ -0.25
PPP4R1-203ENST00000400556 TBC1D2Q9BYX2 928 aa13.48□□□□□ -0.25
PPP4R1-203ENST00000400556 UPF2Q9HAU5 1272 aaKnown RBP13.48□□□□□ -0.25
PPP4R1-203ENST00000400556 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
PPP4R1-203ENST00000400556 MINK1Q8N4C8 1332 aaPredicted RBP13.47□□□□□ -0.25
PPP4R1-203ENST00000400556 C14orf93Q9H972 538 aaKnown RBP13.47□□□□□ -0.25
PPP4R1-203ENST00000400556 RWDD1Q9H446 243 aaPredicted RBP13.46□□□□□ -0.25
PPP4R1-203ENST00000400556 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.26
PPP4R1-203ENST00000400556 RAPGEF3O95398 923 aa13.45□□□□□ -0.26
PPP4R1-203ENST00000400556 MVPQ14764 893 aaKnown RBP13.45□□□□□ -0.26
PPP4R1-203ENST00000400556 ZKSCAN2Q63HK3 967 aa13.45□□□□□ -0.26
PPP4R1-203ENST00000400556 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
PPP4R1-203ENST00000400556 TRIM27P14373 513 aa13.45□□□□□ -0.26
PPP4R1-203ENST00000400556 MYH16Q9H6N6 1097 aa13.45□□□□□ -0.26
PPP4R1-203ENST00000400556 WDR63Q8IWG1 891 aa13.45□□□□□ -0.26
PPP4R1-203ENST00000400556 TBC1D32Q96NH3 1257 aa13.44□□□□□ -0.26
PPP4R1-203ENST00000400556 ELL2O00472 640 aaPredicted RBP13.44□□□□□ -0.26
PPP4R1-203ENST00000400556 KIF1BO60333 1816 aa13.44□□□□□ -0.26
PPP4R1-203ENST00000400556 SLC24A1O60721 1099 aa13.43□□□□□ -0.26
PPP4R1-203ENST00000400556 NOB1Q9ULX3 412 aaKnown RBP13.43□□□□□ -0.26
PPP4R1-203ENST00000400556 NPATQ14207 1427 aa13.43□□□□□ -0.26
PPP4R1-203ENST00000400556 MROH1Q8NDA8 1641 aa13.43□□□□□ -0.26
PPP4R1-203ENST00000400556 THUMPD2Q9BTF0 503 aaKnown RBP13.43□□□□□ -0.26
PPP4R1-203ENST00000400556 EVC2Q86UK5 1308 aa13.43□□□□□ -0.26
PPP4R1-203ENST00000400556 MYOM2P54296 1465 aa13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 DEPDC5O75140 1603 aa13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 PHF23Q9BUL5 403 aaPredicted RBP13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 NLRP1Q9C000 1473 aa13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 SHPRHQ149N8 1683 aa13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 TMEM57Q8N5G2 664 aa13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 NGEFQ8N5V2 710 aa13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 LNPKQ9C0E8 428 aa13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 RIPK4P57078 832 aa13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.42□□□□□ -0.268e-7■■■□□ 19
PPP4R1-203ENST00000400556 C1orf115Q9H7X2 142 aa13.42□□□□□ -0.26
PPP4R1-203ENST00000400556 ANTXR1Q9H6X2 564 aa13.41□□□□□ -0.26
PPP4R1-203ENST00000400556 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
PPP4R1-203ENST00000400556 C22orf23Q9BZE7 217 aa13.41□□□□□ -0.26
PPP4R1-203ENST00000400556 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
PPP4R1-203ENST00000400556 INO80Q9ULG1 1556 aaPredicted RBP13.41□□□□□ -0.26
PPP4R1-203ENST00000400556 EFCAB6Q5THR3 1501 aa13.41□□□□□ -0.26
PPP4R1-203ENST00000400556 ZNF518AQ6AHZ1 1483 aa13.41□□□□□ -0.26
PPP4R1-203ENST00000400556 ASXL2Q76L83 1435 aa13.4□□□□□ -0.26
PPP4R1-203ENST00000400556 VWDEQ8N2E2 1590 aa13.4□□□□□ -0.26
PPP4R1-203ENST00000400556 UHRF1BP1LA0JNW5 1464 aa13.39□□□□□ -0.27
PPP4R1-203ENST00000400556 IQSEC2Q5JU85 1478 aa13.39□□□□□ -0.27
PPP4R1-203ENST00000400556 NINLQ9Y2I6 1382 aa13.39□□□□□ -0.27
PPP4R1-203ENST00000400556 HMOX1P09601 288 aa13.39□□□□□ -0.27
PPP4R1-203ENST00000400556 IDI1Q13907 227 aa13.39□□□□□ -0.27
PPP4R1-203ENST00000400556 A0A1W2PP64 1363 aa13.39□□□□□ -0.27
PPP4R1-203ENST00000400556 QRICH2Q9H0J4 1663 aa13.38□□□□□ -0.27
PPP4R1-203ENST00000400556 PRAM1Q96QH2 718 aa13.38□□□□□ -0.27
PPP4R1-203ENST00000400556 SBNO2Q9Y2G9 1366 aa13.38□□□□□ -0.27
PPP4R1-203ENST00000400556 PANK2Q9BZ23 570 aa13.38□□□□□ -0.27
PPP4R1-203ENST00000400556 KIAA1210Q9ULL0 1709 aa13.38□□□□□ -0.27
PPP4R1-203ENST00000400556 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
PPP4R1-203ENST00000400556 ATF7IPQ6VMQ6 1270 aa13.38□□□□□ -0.27
PPP4R1-203ENST00000400556 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
PPP4R1-203ENST00000400556 FYB1O15117 783 aa13.37□□□□□ -0.27
PPP4R1-203ENST00000400556 KIDINS220Q9ULH0 1771 aa13.36□□□□□ -0.27
PPP4R1-203ENST00000400556 ANKRD36BQ8N2N9 1353 aa13.36□□□□□ -0.27
PPP4R1-203ENST00000400556 VGFO15240 615 aaPredicted RBP13.36□□□□□ -0.27
PPP4R1-203ENST00000400556 CCDC27Q2M243 656 aa13.36□□□□□ -0.27
PPP4R1-203ENST00000400556 PLEKHF1Q96S99 279 aa13.36□□□□□ -0.27
PPP4R1-203ENST00000400556 PRKCSHP14314 528 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-203ENST00000400556 ADGRB1O14514 1584 aa13.35□□□□□ -0.27
PPP4R1-203ENST00000400556 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
PPP4R1-203ENST00000400556 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
PPP4R1-203ENST00000400556 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
PPP4R1-203ENST00000400556 NRXN1Q9ULB1 1477 aa13.34□□□□□ -0.27
PPP4R1-203ENST00000400556 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
PPP4R1-203ENST00000400556 TULP4Q9NRJ4 1543 aa13.34□□□□□ -0.27
PPP4R1-203ENST00000400556 VIRMAQ69YN4 1812 aaKnown RBP13.34□□□□□ -0.27
PPP4R1-203ENST00000400556 DIAPH1O60610 1272 aaKnown RBP13.34□□□□□ -0.27
PPP4R1-203ENST00000400556 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms