RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 QTRT2Q9H974 415 aaKnown RBP18■□□□□ 0.47
LINC00544-201ENST00000400540 RPGRIP1LQ68CZ1 1315 aa17.99■□□□□ 0.47
LINC00544-201ENST00000400540 RGPD8O14715 1765 aaPredicted RBP17.99■□□□□ 0.47
LINC00544-201ENST00000400540 FMN2Q9NZ56 1722 aa17.98■□□□□ 0.47
LINC00544-201ENST00000400540 PXDNQ92626 1479 aa17.97■□□□□ 0.47
LINC00544-201ENST00000400540 RBM6P78332 1123 aaKnown RBP17.97■□□□□ 0.47
LINC00544-201ENST00000400540 NGLY1Q96IV0 654 aa17.96■□□□□ 0.47
LINC00544-201ENST00000400540 ADGRF5Q8IZF2 1346 aa17.96■□□□□ 0.46
LINC00544-201ENST00000400540 SPATA31E1Q6ZUB1 1445 aa17.95■□□□□ 0.46
LINC00544-201ENST00000400540 MYOM2P54296 1465 aa17.95■□□□□ 0.46
LINC00544-201ENST00000400540 CCDC144AA2RUR9 1427 aa17.94■□□□□ 0.46
LINC00544-201ENST00000400540 TECPR2O15040 1411 aa17.93■□□□□ 0.46
LINC00544-201ENST00000400540 KIF1AQ12756 1690 aa17.93■□□□□ 0.46
LINC00544-201ENST00000400540 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
LINC00544-201ENST00000400540 USP21Q9UK80 565 aa17.92■□□□□ 0.46
LINC00544-201ENST00000400540 SRCAPQ6ZRS2 3230 aa17.92■□□□□ 0.46
LINC00544-201ENST00000400540 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
LINC00544-201ENST00000400540 ATRNO75882 1429 aa17.91■□□□□ 0.46
LINC00544-201ENST00000400540 XPCQ01831 940 aaPredicted RBP17.91■□□□□ 0.46
LINC00544-201ENST00000400540 RGL3Q3MIN7 710 aa17.91■□□□□ 0.46
LINC00544-201ENST00000400540 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
LINC00544-201ENST00000400540 STK26Q9P289 416 aa17.91■□□□□ 0.46
LINC00544-201ENST00000400540 PIK3C2GO75747 1445 aa17.9■□□□□ 0.46
LINC00544-201ENST00000400540 WAPLQ7Z5K2 1190 aa17.9■□□□□ 0.46
LINC00544-201ENST00000400540 NUTM2FA1L443 756 aa17.89■□□□□ 0.45
LINC00544-201ENST00000400540 NPHP3Q7Z494 1330 aa17.89■□□□□ 0.45
LINC00544-201ENST00000400540 LRPPRCP42704 1394 aaKnown RBP17.89■□□□□ 0.45
LINC00544-201ENST00000400540 ABCA3Q99758 1704 aa17.89■□□□□ 0.45
LINC00544-201ENST00000400540 TMEM132EQ6IEE7 984 aa17.88■□□□□ 0.45
LINC00544-201ENST00000400540 FNBP4Q8N3X1 1017 aaPredicted RBP17.88■□□□□ 0.45
LINC00544-201ENST00000400540 BRWD3Q6RI45 1802 aa17.88■□□□□ 0.45
LINC00544-201ENST00000400540 BCL9LQ86UU0 1499 aa17.88■□□□□ 0.45
LINC00544-201ENST00000400540 FOXO3O43524 673 aa17.87■□□□□ 0.45
LINC00544-201ENST00000400540 TRPC5Q9UL62 973 aaPredicted RBP17.87■□□□□ 0.45
LINC00544-201ENST00000400540 ATAD2Q6PL18 1390 aa17.87■□□□□ 0.45
LINC00544-201ENST00000400540 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
LINC00544-201ENST00000400540 MPHOSPH9Q99550 1183 aa17.86■□□□□ 0.45
LINC00544-201ENST00000400540 YTHDC2Q9H6S0 1430 aaKnown RBP17.86■□□□□ 0.45
LINC00544-201ENST00000400540 USP32Q8NFA0 1604 aa17.86■□□□□ 0.45
LINC00544-201ENST00000400540 PLCH1Q4KWH8 1693 aa17.86■□□□□ 0.45
LINC00544-201ENST00000400540 GLI3P10071 1580 aa17.85■□□□□ 0.45
LINC00544-201ENST00000400540 ABCC11Q96J66 1382 aa17.85■□□□□ 0.45
LINC00544-201ENST00000400540 NRXN1Q9ULB1 1477 aa17.82■□□□□ 0.44
LINC00544-201ENST00000400540 SLIT2O94813 1529 aa17.8■□□□□ 0.44
LINC00544-201ENST00000400540 NWD2Q9ULI1 1742 aa17.8■□□□□ 0.44
LINC00544-201ENST00000400540 SPATA31A3Q5VYP0 1347 aa17.78■□□□□ 0.44
LINC00544-201ENST00000400540 RALGAPBQ86X10 1494 aa17.78■□□□□ 0.44
LINC00544-201ENST00000400540 TNS3Q68CZ2 1445 aa17.77■□□□□ 0.44
LINC00544-201ENST00000400540 TRPM3Q9HCF6 1732 aaPredicted RBP17.77■□□□□ 0.44
LINC00544-201ENST00000400540 ADGRB2O60241 1585 aa17.76■□□□□ 0.43
LINC00544-201ENST00000400540 CFAP70Q5T0N1 1121 aa17.76■□□□□ 0.43
LINC00544-201ENST00000400540 GJD4Q96KN9 370 aaPredicted RBP17.76■□□□□ 0.43
LINC00544-201ENST00000400540 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
LINC00544-201ENST00000400540 KRT28Q7Z3Y7 464 aa17.75■□□□□ 0.43
LINC00544-201ENST00000400540 C14orf93Q9H972 538 aaKnown RBP17.75■□□□□ 0.43
LINC00544-201ENST00000400540 DLC1Q96QB1 1528 aa17.74■□□□□ 0.43
LINC00544-201ENST00000400540 PLEKHG5O94827 1062 aa17.74■□□□□ 0.43
LINC00544-201ENST00000400540 SAFB2Q14151 953 aaKnown RBP eCLIP17.74■□□□□ 0.43
LINC00544-201ENST00000400540 ADGRB1O14514 1584 aa17.74■□□□□ 0.43
LINC00544-201ENST00000400540 ALS2Q96Q42 1657 aa17.74■□□□□ 0.43
LINC00544-201ENST00000400540 UNC5CLQ8IV45 518 aa17.73■□□□□ 0.43
LINC00544-201ENST00000400540 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
LINC00544-201ENST00000400540 DHX57Q6P158 1386 aaKnown RBP17.73■□□□□ 0.43
LINC00544-201ENST00000400540 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
LINC00544-201ENST00000400540 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
LINC00544-201ENST00000400540 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
LINC00544-201ENST00000400540 PRAM1Q96QH2 718 aa17.71■□□□□ 0.43
LINC00544-201ENST00000400540 ARHGEF28Q8N1W1 1705 aaKnown RBP17.69■□□□□ 0.42
LINC00544-201ENST00000400540 SBNO1A3KN83 1393 aa17.68■□□□□ 0.42
LINC00544-201ENST00000400540 RAB3GAP2Q9H2M9 1393 aa17.68■□□□□ 0.42
LINC00544-201ENST00000400540 HAP1P54257 671 aaPredicted RBP17.68■□□□□ 0.42
LINC00544-201ENST00000400540 ANKARQ7Z5J8 1434 aa17.67■□□□□ 0.42
LINC00544-201ENST00000400540 PSME1Q06323 249 aa17.67■□□□□ 0.42
LINC00544-201ENST00000400540 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
LINC00544-201ENST00000400540 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
LINC00544-201ENST00000400540 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
LINC00544-201ENST00000400540 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
LINC00544-201ENST00000400540 BLMP54132 1417 aaPredicted RBP17.66■□□□□ 0.42
LINC00544-201ENST00000400540 CCDC125Q86Z20 511 aa17.66■□□□□ 0.42
LINC00544-201ENST00000400540 ZRANB1Q9UGI0 708 aa17.66■□□□□ 0.42
LINC00544-201ENST00000400540 ARHGEF10O15013 1369 aa17.66■□□□□ 0.42
LINC00544-201ENST00000400540 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
LINC00544-201ENST00000400540 POGKQ9P215 609 aa17.65■□□□□ 0.42
LINC00544-201ENST00000400540 TULP4Q9NRJ4 1543 aa17.65■□□□□ 0.42
LINC00544-201ENST00000400540 VPS72Q15906 364 aa17.64■□□□□ 0.41
LINC00544-201ENST00000400540 SEPT12Q8IYM1 358 aa17.64■□□□□ 0.41
LINC00544-201ENST00000400540 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
LINC00544-201ENST00000400540 DEFB132Q7Z7B7 95 aa17.63■□□□□ 0.41
LINC00544-201ENST00000400540 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
LINC00544-201ENST00000400540 PRR36Q9H6K5 1346 aa17.63■□□□□ 0.41
LINC00544-201ENST00000400540 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
LINC00544-201ENST00000400540 MINK1Q8N4C8 1332 aaPredicted RBP17.62■□□□□ 0.41
LINC00544-201ENST00000400540 FAM83GA6ND36 823 aa17.61■□□□□ 0.41
LINC00544-201ENST00000400540 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
LINC00544-201ENST00000400540 RGPD1P0DJD0 1748 aa17.61■□□□□ 0.41
LINC00544-201ENST00000400540 TOPAZ1Q8N9V7 1692 aa17.6■□□□□ 0.41
LINC00544-201ENST00000400540 TNS1Q9HBL0 1735 aaKnown RBP17.59■□□□□ 0.41
LINC00544-201ENST00000400540 KDM2AQ9Y2K7 1162 aa17.59■□□□□ 0.41
LINC00544-201ENST00000400540 THSD7AQ9UPZ6 1657 aa17.58■□□□□ 0.41
LINC00544-201ENST00000400540 ONECUT3O60422 494 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms