RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 ILDR1Q86SU0 546 aaPredicted RBP25.95■■□□□ 1.74
SBF1-203ENST00000399627 ROCK2O75116 1388 aaKnown RBP25.95■■□□□ 1.74
SBF1-203ENST00000399627 SCAF1Q9H7N4 1312 aaKnown RBP25.94■■□□□ 1.74
SBF1-203ENST00000399627 CADPS2Q86UW7 1296 aa25.94■■□□□ 1.74
SBF1-203ENST00000399627 POGKQ9P215 609 aa25.94■■□□□ 1.74
SBF1-203ENST00000399627 DCCP43146 1447 aa25.94■■□□□ 1.74
SBF1-203ENST00000399627 SAFB2Q14151 953 aaKnown RBP eCLIP25.93■■□□□ 1.74
SBF1-203ENST00000399627 RALGAPBQ86X10 1494 aa25.92■■□□□ 1.74
SBF1-203ENST00000399627 SLAIN2Q9P270 581 aa25.9■■□□□ 1.74
SBF1-203ENST00000399627 GPRASP1Q5JY77 1395 aa25.89■■□□□ 1.74
SBF1-203ENST00000399627 CDC42BPGQ6DT37 1551 aa25.88■■□□□ 1.73
SBF1-203ENST00000399627 MST1RQ04912 1400 aa25.86■■□□□ 1.73
SBF1-203ENST00000399627 ROBO1Q9Y6N7 1651 aa25.85■■□□□ 1.73
SBF1-203ENST00000399627 CARD11Q9BXL7 1154 aa25.85■■□□□ 1.73
SBF1-203ENST00000399627 MINK1Q8N4C8 1332 aaPredicted RBP25.85■■□□□ 1.73
SBF1-203ENST00000399627 FMN2Q9NZ56 1722 aa25.83■■□□□ 1.72
SBF1-203ENST00000399627 HIRIP3Q9BW71 556 aaPredicted RBP25.82■■□□□ 1.72
SBF1-203ENST00000399627 ADGRB2O60241 1585 aa25.82■■□□□ 1.72
SBF1-203ENST00000399627 CENPJQ9HC77 1338 aaPredicted RBP25.81■■□□□ 1.72
SBF1-203ENST00000399627 QRICH2Q9H0J4 1663 aa25.8■■□□□ 1.72
SBF1-203ENST00000399627 C1orf167Q5SNV9 1468 aa25.8■■□□□ 1.72
SBF1-203ENST00000399627 NUTM2FA1L443 756 aa25.78■■□□□ 1.72
SBF1-203ENST00000399627 EIF3AQ14152 1382 aaKnown RBP25.77■■□□□ 1.72
SBF1-203ENST00000399627 RGPD8O14715 1765 aaPredicted RBP25.77■■□□□ 1.72
SBF1-203ENST00000399627 BRINP3Q76B58 766 aa25.76■■□□□ 1.71
SBF1-203ENST00000399627 HSPA1LP34931 641 aa25.75■■□□□ 1.71
SBF1-203ENST00000399627 WASLO00401 505 aaPredicted RBP25.74■■□□□ 1.71
SBF1-203ENST00000399627 ORAI2Q96SN7 254 aa25.73■■□□□ 1.71
SBF1-203ENST00000399627 USP32Q8NFA0 1604 aa25.7■■□□□ 1.71
SBF1-203ENST00000399627 ESCO1Q5FWF5 840 aa25.7■■□□□ 1.7
SBF1-203ENST00000399627 PHLPP1O60346 1717 aa25.7■■□□□ 1.7
SBF1-203ENST00000399627 TULP4Q9NRJ4 1543 aa25.69■■□□□ 1.7
SBF1-203ENST00000399627 CDK19Q9BWU1 502 aa25.69■■□□□ 1.7
SBF1-203ENST00000399627 ANKARQ7Z5J8 1434 aa25.68■■□□□ 1.7
SBF1-203ENST00000399627 NHSL1Q5SYE7 1610 aa25.67■■□□□ 1.7
SBF1-203ENST00000399627 AHDC1Q5TGY3 1603 aaPredicted RBP25.67■■□□□ 1.7
SBF1-203ENST00000399627 USP47Q96K76 1375 aa25.67■■□□□ 1.7
SBF1-203ENST00000399627 PRR36Q9H6K5 1346 aa25.66■■□□□ 1.7
SBF1-203ENST00000399627 DDX17Q92841 729 aaKnown RBP25.65■■□□□ 1.7
SBF1-203ENST00000399627 ST20-MTHFSA0A0A6YYL1 179 aa25.63■■□□□ 1.69
SBF1-203ENST00000399627 SBNO2Q9Y2G9 1366 aa25.63■■□□□ 1.69
SBF1-203ENST00000399627 KIF1AQ12756 1690 aa25.63■■□□□ 1.69
SBF1-203ENST00000399627 COL16A1Q07092 1604 aaPredicted RBP25.63■■□□□ 1.69
SBF1-203ENST00000399627 ATP7BP35670 1465 aa25.62■■□□□ 1.69
SBF1-203ENST00000399627 NUDT16Q96DE0 195 aaKnown RBP25.62■■□□□ 1.69
SBF1-203ENST00000399627 EVC2Q86UK5 1308 aa25.62■■□□□ 1.69
SBF1-203ENST00000399627 ITSN1Q15811 1721 aa25.61■■□□□ 1.69
SBF1-203ENST00000399627 SRPK2P78362 688 aaKnown RBP25.61■■□□□ 1.69
SBF1-203ENST00000399627 CABP2Q9NPB3 220 aa25.61■■□□□ 1.69
SBF1-203ENST00000399627 PHF8Q9UPP1 1060 aa25.61■■□□□ 1.69
SBF1-203ENST00000399627 TOPAZ1Q8N9V7 1692 aa25.58■■□□□ 1.69
SBF1-203ENST00000399627 FOXO3O43524 673 aa25.58■■□□□ 1.69
SBF1-203ENST00000399627 PMFBP1Q8TBY8 1022 aa25.58■■□□□ 1.69
SBF1-203ENST00000399627 TESK2Q96S53 571 aa25.58■■□□□ 1.69
SBF1-203ENST00000399627 NPHP3Q7Z494 1330 aa25.57■■□□□ 1.68
SBF1-203ENST00000399627 CCDC61Q9Y6R9 512 aa25.55■■□□□ 1.68
SBF1-203ENST00000399627 XPCQ01831 940 aaPredicted RBP25.54■■□□□ 1.68
SBF1-203ENST00000399627 SOS2Q07890 1332 aaPredicted RBP25.54■■□□□ 1.68
SBF1-203ENST00000399627 PXDNQ92626 1479 aa25.53■■□□□ 1.68
SBF1-203ENST00000399627 EIF4G2P78344 907 aaKnown RBP eCLIP25.51■■□□□ 1.67
SBF1-203ENST00000399627 HSPA5P11021 654 aaKnown RBP25.5■■□□□ 1.67
SBF1-203ENST00000399627 PPIP5K1Q6PFW1 1433 aa25.5■■□□□ 1.67
SBF1-203ENST00000399627 NGDNQ8NEJ9 315 aaKnown RBP25.5■■□□□ 1.67
SBF1-203ENST00000399627 LRRC59Q96AG4 307 aaKnown RBP25.5■■□□□ 1.67
SBF1-203ENST00000399627 JCADQ9P266 1359 aa25.49■■□□□ 1.67
SBF1-203ENST00000399627 PLEKHG3A1L390 1219 aa25.49■■□□□ 1.67
SBF1-203ENST00000399627 KRT28Q7Z3Y7 464 aa25.49■■□□□ 1.67
SBF1-203ENST00000399627 SLC24A1O60721 1099 aa25.48■■□□□ 1.67
SBF1-203ENST00000399627 PSME1Q06323 249 aa25.48■■□□□ 1.67
SBF1-203ENST00000399627 SHPRHQ149N8 1683 aa25.48■■□□□ 1.67
SBF1-203ENST00000399627 ATAD2Q6PL18 1390 aa25.47■■□□□ 1.67
SBF1-203ENST00000399627 DISP3Q9P2K9 1392 aa25.47■■□□□ 1.67
SBF1-203ENST00000399627 ACEP12821 1306 aa25.46■■□□□ 1.67
SBF1-203ENST00000399627 TMF1P82094 1093 aa25.46■■□□□ 1.67
SBF1-203ENST00000399627 CABP1Q9NZU7 370 aa25.46■■□□□ 1.67
SBF1-203ENST00000399627 POLR3AO14802 1390 aaPredicted RBP25.45■■□□□ 1.67
SBF1-203ENST00000399627 TRPM3Q9HCF6 1732 aaPredicted RBP25.43■■□□□ 1.66
SBF1-203ENST00000399627 PUS7Q96PZ0 661 aaKnown RBP25.43■■□□□ 1.66
SBF1-203ENST00000399627 PNPLA6Q8IY17 1366 aa25.43■■□□□ 1.66
SBF1-203ENST00000399627 SPATA31A3Q5VYP0 1347 aa25.41■■□□□ 1.66
SBF1-203ENST00000399627 SBNO1A3KN83 1393 aa25.41■■□□□ 1.66
SBF1-203ENST00000399627 TNS3Q68CZ2 1445 aa25.39■■□□□ 1.66
SBF1-203ENST00000399627 AKAP12Q02952 1782 aa25.39■■□□□ 1.66
SBF1-203ENST00000399627 TMC1Q8TDI8 760 aa25.39■■□□□ 1.66
SBF1-203ENST00000399627 COL22A1Q8NFW1 1626 aaPredicted RBP25.37■■□□□ 1.65
SBF1-203ENST00000399627 SPATA31A6Q5VVP1 1343 aa25.37■■□□□ 1.65
SBF1-203ENST00000399627 ALS2Q96Q42 1657 aa25.36■■□□□ 1.65
SBF1-203ENST00000399627 CDCA8Q53HL2 280 aa25.36■■□□□ 1.65
SBF1-203ENST00000399627 SLC12A5Q9H2X9 1139 aa25.36■■□□□ 1.65
SBF1-203ENST00000399627 MED1Q15648 1581 aaPredicted RBP25.35■■□□□ 1.65
SBF1-203ENST00000399627 PAK3O75914 559 aaPredicted RBP25.35■■□□□ 1.65
SBF1-203ENST00000399627 LMOD2Q6P5Q4 547 aa25.35■■□□□ 1.65
SBF1-203ENST00000399627 NUTM2BA6NNL0 878 aaPredicted RBP25.33■■□□□ 1.65
SBF1-203ENST00000399627 NUTM2EB1AL46 878 aaPredicted RBP25.33■■□□□ 1.65
SBF1-203ENST00000399627 USP6P35125 1406 aa25.33■■□□□ 1.65
SBF1-203ENST00000399627 CPSF1Q10570 1443 aaKnown RBP25.33■■□□□ 1.65
SBF1-203ENST00000399627 NUTM2AQ8IVF1 878 aaPredicted RBP25.33■■□□□ 1.65
SBF1-203ENST00000399627 LRP6O75581 1613 aa25.33■■□□□ 1.65
SBF1-203ENST00000399627 ARHGEF10O15013 1369 aa25.32■■□□□ 1.64
SBF1-203ENST00000399627 ZNF692Q9BU19 519 aaPredicted RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms