RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
CACNA1C-208ENST00000399601 BICD2Q8TD16 824 aa13.43□□□□□ -0.26
CACNA1C-208ENST00000399601 ERICH2A1L162 156 aa13.43□□□□□ -0.26
CACNA1C-208ENST00000399601 DDX49Q9Y6V7 483 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-208ENST00000399601 ANO2Q9NQ90 1003 aa13.42□□□□□ -0.26
CACNA1C-208ENST00000399601 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-208ENST00000399601 CBX1P83916 185 aa13.42□□□□□ -0.26
CACNA1C-208ENST00000399601 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-208ENST00000399601 TXNDC2Q86VQ3 553 aa13.42□□□□□ -0.26
CACNA1C-208ENST00000399601 ACBD3Q9H3P7 528 aa13.42□□□□□ -0.26
CACNA1C-208ENST00000399601 RBM19Q9Y4C8 960 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-208ENST00000399601 AEBP1Q8IUX7 1158 aa13.42□□□□□ -0.26
CACNA1C-208ENST00000399601 GOLGA6L10A0A0M3HER8 536 aa13.41□□□□□ -0.26
CACNA1C-208ENST00000399601 GOLGA6L10A6NI86 522 aa13.41□□□□□ -0.26
CACNA1C-208ENST00000399601 RSPH6AQ9H0K4 717 aa13.41□□□□□ -0.26
CACNA1C-208ENST00000399601 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
CACNA1C-208ENST00000399601 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.26
CACNA1C-208ENST00000399601 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
CACNA1C-208ENST00000399601 CHMP4BP1P59074 171 aa13.4□□□□□ -0.26
CACNA1C-208ENST00000399601 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
CACNA1C-208ENST00000399601 ST18O60284 1047 aa13.4□□□□□ -0.26
CACNA1C-208ENST00000399601 ATP2B2Q01814 1243 aa13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 CWC15Q9P013 229 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 RIC3Q7Z5B4 369 aa13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 TNNT1P13805 278 aa13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 SYCP1Q15431 976 aa13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 ARGLU1Q9NWB6 273 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-208ENST00000399601 ADAMTS2O95450 1211 aa13.38□□□□□ -0.27
CACNA1C-208ENST00000399601 THEMISQ8N1K5 641 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-208ENST00000399601 UACAQ9BZF9 1416 aa13.38□□□□□ -0.27
CACNA1C-208ENST00000399601 CT47B1P0C2W7 299 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-208ENST00000399601 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
CACNA1C-208ENST00000399601 RWDD1Q9H446 243 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-208ENST00000399601 SOGA3Q5TF21 947 aa13.38□□□□□ -0.27
CACNA1C-208ENST00000399601 ARHGAP35Q9NRY4 1499 aa13.38□□□□□ -0.27
CACNA1C-208ENST00000399601 TRDNQ13061 729 aa13.38□□□□□ -0.27
CACNA1C-208ENST00000399601 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-208ENST00000399601 ELL2O00472 640 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-208ENST00000399601 MATR3P43243 847 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1C-208ENST00000399601 ABTB2Q8N961 1025 aa13.37□□□□□ -0.27
CACNA1C-208ENST00000399601 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-208ENST00000399601 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
CACNA1C-208ENST00000399601 WDR78Q5VTH9 848 aa13.37□□□□□ -0.27
CACNA1C-208ENST00000399601 LEKR1Q6ZMV7 388 aa13.37□□□□□ -0.27
CACNA1C-208ENST00000399601 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
CACNA1C-208ENST00000399601 MYO6Q9UM54 1294 aa13.36□□□□□ -0.27
CACNA1C-208ENST00000399601 TMCO4Q5TGY1 634 aa13.36□□□□□ -0.27
CACNA1C-208ENST00000399601 TAF3Q5VWG9 929 aa13.36□□□□□ -0.27
CACNA1C-208ENST00000399601 ERICH4A6NGS2 130 aa13.36□□□□□ -0.27
CACNA1C-208ENST00000399601 NLRP6P59044 892 aa13.36□□□□□ -0.27
CACNA1C-208ENST00000399601 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-208ENST00000399601 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
CACNA1C-208ENST00000399601 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
CACNA1C-208ENST00000399601 PDCL3Q9H2J4 239 aa13.35□□□□□ -0.27
CACNA1C-208ENST00000399601 CPLX1O14810 134 aa13.35□□□□□ -0.27
CACNA1C-208ENST00000399601 BICDL1Q6ZP65 573 aa13.34□□□□□ -0.27
CACNA1C-208ENST00000399601 KIAA0754O94854 1291 aa13.34□□□□□ -0.27
CACNA1C-208ENST00000399601 SSR1P43307 286 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-208ENST00000399601 GBP2P32456 591 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-208ENST00000399601 EZRP15311 586 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-208ENST00000399601 SASS6Q6UVJ0 657 aa13.34□□□□□ -0.27
CACNA1C-208ENST00000399601 POGZQ7Z3K3 1410 aa13.34□□□□□ -0.27
CACNA1C-208ENST00000399601 RALBP1Q15311 655 aa13.34□□□□□ -0.27
CACNA1C-208ENST00000399601 NEUROD6Q96NK8 337 aa13.33□□□□□ -0.27
CACNA1C-208ENST00000399601 SRRTQ9BXP5 876 aaKnown RBP13.33□□□□□ -0.27
CACNA1C-208ENST00000399601 ZHX3Q9H4I2 956 aa13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 VPS37CA5D8V6 355 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 CHMP4CQ96CF2 233 aa13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 TATP17735 454 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 G3BP1Q13283 466 aaKnown RBP eCLIP13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 PRDM11Q9NQV5 511 aa13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 UBAP1LF5GYI3 381 aa13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 IFIT2P09913 472 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 IPO9Q96P70 1041 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 HOOK1Q9UJC3 728 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-208ENST00000399601 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
CACNA1C-208ENST00000399601 GPATCH11Q8N954 259 aa13.32□□□□□ -0.28
CACNA1C-208ENST00000399601 HSP90AB4PQ58FF6 505 aa13.32□□□□□ -0.28
CACNA1C-208ENST00000399601 CCDC112Q8NEF3 446 aa13.32□□□□□ -0.28
CACNA1C-208ENST00000399601 SMC2O95347 1197 aa13.32□□□□□ -0.28
CACNA1C-208ENST00000399601 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
CACNA1C-208ENST00000399601 FLIIQ13045 1269 aa13.32□□□□□ -0.28
CACNA1C-208ENST00000399601 INCENPQ9NQS7 918 aa13.31□□□□□ -0.28
CACNA1C-208ENST00000399601 FAM177A1Q8N128 213 aaPredicted RBP13.31□□□□□ -0.28
CACNA1C-208ENST00000399601 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
CACNA1C-208ENST00000399601 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
CACNA1C-208ENST00000399601 DDX11L8A8MPP1 907 aa13.31□□□□□ -0.28
CACNA1C-208ENST00000399601 TMCO5BA8MYB1 307 aa13.31□□□□□ -0.28
CACNA1C-208ENST00000399601 KRT18P05783 430 aaKnown RBP13.31□□□□□ -0.28
CACNA1C-208ENST00000399601 GRIPAP1Q4V328 841 aa13.3□□□□□ -0.28
CACNA1C-208ENST00000399601 DZIP1Q86YF9 867 aaKnown RBP13.3□□□□□ -0.28
CACNA1C-208ENST00000399601 DIAPH3Q9NSV4 1193 aa13.3□□□□□ -0.28
CACNA1C-208ENST00000399601 CABP4P57796 275 aa13.3□□□□□ -0.28
CACNA1C-208ENST00000399601 WASHC4Q2M389 1173 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms