RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 NSD3Q9BZ95 1437 aa15.63■□□□□ 0.09
COL25A1-202ENST00000399127 ARHGEF28Q8N1W1 1705 aaKnown RBP15.62■□□□□ 0.09
COL25A1-202ENST00000399127 CABP2Q9NPB3 220 aa15.62■□□□□ 0.09
COL25A1-202ENST00000399127 CCDC146Q8IYE0 955 aa15.62■□□□□ 0.09
COL25A1-202ENST00000399127 RCAN3Q9UKA8 241 aa15.61■□□□□ 0.09
COL25A1-202ENST00000399127 A2ML1A8K2U0 1454 aa15.61■□□□□ 0.09
COL25A1-202ENST00000399127 PDE3BQ13370 1112 aa15.61■□□□□ 0.09
COL25A1-202ENST00000399127 EVC2Q86UK5 1308 aa15.6■□□□□ 0.09
COL25A1-202ENST00000399127 ZFYVE9O95405 1425 aa15.6■□□□□ 0.09
COL25A1-202ENST00000399127 RIMS2Q9UQ26 1411 aa15.6■□□□□ 0.09
COL25A1-202ENST00000399127 TULP4Q9NRJ4 1543 aa15.6■□□□□ 0.09
COL25A1-202ENST00000399127 UBE2Q2Q8WVN8 375 aa15.59■□□□□ 0.09
COL25A1-202ENST00000399127 MORC1Q86VD1 984 aa15.58■□□□□ 0.09
COL25A1-202ENST00000399127 MINK1Q8N4C8 1332 aaPredicted RBP15.58■□□□□ 0.09
COL25A1-202ENST00000399127 INSRP06213 1382 aa15.58■□□□□ 0.09
COL25A1-202ENST00000399127 PLEKHH1Q9ULM0 1364 aa15.58■□□□□ 0.09
COL25A1-202ENST00000399127 RRP1P56182 461 aaKnown RBP15.58■□□□□ 0.08
COL25A1-202ENST00000399127 PRAM1Q96QH2 718 aa15.58■□□□□ 0.08
COL25A1-202ENST00000399127 SRPK2P78362 688 aaKnown RBP15.57■□□□□ 0.08
COL25A1-202ENST00000399127 RBM19Q9Y4C8 960 aaKnown RBP15.57■□□□□ 0.08
COL25A1-202ENST00000399127 POGKQ9P215 609 aa15.56■□□□□ 0.08
COL25A1-202ENST00000399127 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
COL25A1-202ENST00000399127 FER1L4A9Z1Z3 1794 aa15.55■□□□□ 0.08
COL25A1-202ENST00000399127 YTHDC2Q9H6S0 1430 aaKnown RBP15.55■□□□□ 0.08
COL25A1-202ENST00000399127 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.55■□□□□ 0.08
COL25A1-202ENST00000399127 PLIN1O60240 522 aa15.54■□□□□ 0.08
COL25A1-202ENST00000399127 HDGFP51858 240 aaKnown RBP15.54■□□□□ 0.08
COL25A1-202ENST00000399127 APAF1O14727 1248 aa15.54■□□□□ 0.08
COL25A1-202ENST00000399127 PTPRMP28827 1452 aa15.53■□□□□ 0.08
COL25A1-202ENST00000399127 CGNL1Q0VF96 1302 aa15.53■□□□□ 0.08
COL25A1-202ENST00000399127 ALKQ9UM73 1620 aa15.53■□□□□ 0.08
COL25A1-202ENST00000399127 EXOC6Q8TAG9 804 aa15.53■□□□□ 0.08
COL25A1-202ENST00000399127 C3P01024 1663 aa15.52■□□□□ 0.08
COL25A1-202ENST00000399127 MSH5O43196 834 aa15.52■□□□□ 0.07
COL25A1-202ENST00000399127 ANKRD36BQ8N2N9 1353 aa15.51■□□□□ 0.07
COL25A1-202ENST00000399127 WAPLQ7Z5K2 1190 aa15.5■□□□□ 0.07
COL25A1-202ENST00000399127 A0A1W2PP64 1363 aa15.5■□□□□ 0.07
COL25A1-202ENST00000399127 TMEM2Q9UHN6 1383 aa15.5■□□□□ 0.07
COL25A1-202ENST00000399127 MTHFSP49914 203 aa15.5■□□□□ 0.07
COL25A1-202ENST00000399127 GOLGA2Q08379 1002 aa15.5■□□□□ 0.07
COL25A1-202ENST00000399127 TXNDC2Q86VQ3 553 aa15.5■□□□□ 0.07
COL25A1-202ENST00000399127 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
COL25A1-202ENST00000399127 POLR3AO14802 1390 aaPredicted RBP15.49■□□□□ 0.07
COL25A1-202ENST00000399127 DUSP27Q5VZP5 1158 aa15.49■□□□□ 0.07
COL25A1-202ENST00000399127 PUS7Q96PZ0 661 aaKnown RBP15.49■□□□□ 0.07
COL25A1-202ENST00000399127 NLRP1Q9C000 1473 aa15.49■□□□□ 0.07
COL25A1-202ENST00000399127 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
COL25A1-202ENST00000399127 LTKP29376 864 aa15.48■□□□□ 0.07
COL25A1-202ENST00000399127 CDK19Q9BWU1 502 aa15.48■□□□□ 0.07
COL25A1-202ENST00000399127 GGNBP2Q9H3C7 697 aa15.48■□□□□ 0.07
COL25A1-202ENST00000399127 EID1Q9Y6B2 187 aa15.48■□□□□ 0.07
COL25A1-202ENST00000399127 UBR1Q8IWV7 1749 aa15.47■□□□□ 0.07
COL25A1-202ENST00000399127 RIMS1Q86UR5 1692 aaKnown RBP15.47■□□□□ 0.07
COL25A1-202ENST00000399127 NEUROD2Q15784 382 aa15.47■□□□□ 0.07
COL25A1-202ENST00000399127 DEKP35659 375 aaKnown RBP15.46■□□□□ 0.07
COL25A1-202ENST00000399127 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.07
COL25A1-202ENST00000399127 RRP7AQ9Y3A4 280 aaKnown RBP15.46■□□□□ 0.06
COL25A1-202ENST00000399127 USP32Q8NFA0 1604 aa15.46■□□□□ 0.06
COL25A1-202ENST00000399127 METP08581 1390 aa15.45■□□□□ 0.06
COL25A1-202ENST00000399127 THEMISQ8N1K5 641 aaPredicted RBP15.45■□□□□ 0.06
COL25A1-202ENST00000399127 CABP1Q9NZU7 370 aa15.45■□□□□ 0.06
COL25A1-202ENST00000399127 SHPRHQ149N8 1683 aa15.44■□□□□ 0.06
COL25A1-202ENST00000399127 ATAD2Q6PL18 1390 aa15.44■□□□□ 0.06
COL25A1-202ENST00000399127 SLFN5Q08AF3 891 aa15.44■□□□□ 0.06
COL25A1-202ENST00000399127 C20orf194Q5TEA3 1177 aa15.44■□□□□ 0.06
COL25A1-202ENST00000399127 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
COL25A1-202ENST00000399127 TERF2IPQ9NYB0 399 aa15.44■□□□□ 0.06
COL25A1-202ENST00000399127 ABCC11Q96J66 1382 aa15.43■□□□□ 0.06
COL25A1-202ENST00000399127 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
COL25A1-202ENST00000399127 CRBNQ96SW2 442 aa15.42■□□□□ 0.06
COL25A1-202ENST00000399127 CD163L1Q9NR16 1453 aa15.42■□□□□ 0.06
COL25A1-202ENST00000399127 EIF5BO60841 1220 aaKnown RBP15.42■□□□□ 0.06
COL25A1-202ENST00000399127 NSD2O96028 1365 aa15.41■□□□□ 0.06
COL25A1-202ENST00000399127 NINLQ9Y2I6 1382 aa15.41■□□□□ 0.06
COL25A1-202ENST00000399127 FYB1O15117 783 aa15.41■□□□□ 0.06
COL25A1-202ENST00000399127 SETD1AO15047 1707 aaKnown RBP15.41■□□□□ 0.06
COL25A1-202ENST00000399127 NRXN3Q9Y4C0 1643 aa15.4■□□□□ 0.06
COL25A1-202ENST00000399127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL25A1-202ENST00000399127 U2AF1L5P0DN76 240 aaPredicted RBP15.4■□□□□ 0.06
COL25A1-202ENST00000399127 U2AF1Q01081 240 aaKnown RBP eCLIP15.4■□□□□ 0.06
COL25A1-202ENST00000399127 HDGFL2Q7Z4V5 671 aaPredicted RBP15.4■□□□□ 0.06
COL25A1-202ENST00000399127 WWC1Q8IX03 1113 aa15.4■□□□□ 0.06
COL25A1-202ENST00000399127 TCP11L2Q8N4U5 519 aa15.4■□□□□ 0.06
COL25A1-202ENST00000399127 RUNDC1Q96C34 613 aa15.39■□□□□ 0.05
COL25A1-202ENST00000399127 PLEKHG1Q9ULL1 1385 aa15.39■□□□□ 0.05
COL25A1-202ENST00000399127 TRMT2AQ8IZ69 625 aaKnown RBP15.39■□□□□ 0.05
COL25A1-202ENST00000399127 E9PSI1 815 aa15.38■□□□□ 0.05
COL25A1-202ENST00000399127 ADAMTSL3P82987 1691 aa15.38■□□□□ 0.05
COL25A1-202ENST00000399127 FBLN1P23142 703 aa15.38■□□□□ 0.05
COL25A1-202ENST00000399127 U2SURPO15042 1029 aaKnown RBP15.37■□□□□ 0.05
COL25A1-202ENST00000399127 ADAMTS13Q76LX8 1427 aa15.37■□□□□ 0.05
COL25A1-202ENST00000399127 NCKAP5LQ9HCH0 1330 aa15.37■□□□□ 0.05
COL25A1-202ENST00000399127 NKTRP30414 1462 aaKnown RBP15.36■□□□□ 0.05
COL25A1-202ENST00000399127 BCAR3O75815 825 aa15.36■□□□□ 0.05
COL25A1-202ENST00000399127 DLC1Q96QB1 1528 aa15.36■□□□□ 0.05
COL25A1-202ENST00000399127 CEP170BQ9Y4F5 1589 aaPredicted RBP15.35■□□□□ 0.05
COL25A1-202ENST00000399127 SLIT1O75093 1534 aa15.35■□□□□ 0.05
COL25A1-202ENST00000399127 ARHGAP23Q9P227 1491 aa15.34■□□□□ 0.05
COL25A1-202ENST00000399127 WASLO00401 505 aaPredicted RBP15.34■□□□□ 0.05
COL25A1-202ENST00000399127 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms