RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 RGS3P49796 1198 aa11.75□□□□□ -0.53
GIN1-201ENST00000399004 TULP4Q9NRJ4 1543 aa11.75□□□□□ -0.53
GIN1-201ENST00000399004 AMER1Q5JTC6 1135 aaPredicted RBP11.75□□□□□ -0.53
GIN1-201ENST00000399004 TRMT2AQ8IZ69 625 aaKnown RBP11.74□□□□□ -0.53
GIN1-201ENST00000399004 DLC1Q96QB1 1528 aa11.74□□□□□ -0.53
GIN1-201ENST00000399004 SPATA31D1Q6ZQQ2 1576 aa11.73□□□□□ -0.53
GIN1-201ENST00000399004 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
GIN1-201ENST00000399004 PDE4AP27815 886 aa11.72□□□□□ -0.53
GIN1-201ENST00000399004 RPGRIP1LQ68CZ1 1315 aa11.72□□□□□ -0.53
GIN1-201ENST00000399004 TMF1P82094 1093 aa11.71□□□□□ -0.53
GIN1-201ENST00000399004 NRXN3Q9Y4C0 1643 aa11.71□□□□□ -0.53
GIN1-201ENST00000399004 KCNA4P22459 653 aa11.71□□□□□ -0.53
GIN1-201ENST00000399004 POLR3AO14802 1390 aaPredicted RBP11.7□□□□□ -0.54
GIN1-201ENST00000399004 RCAN3Q9UKA8 241 aa11.69□□□□□ -0.54
GIN1-201ENST00000399004 RIMS1Q86UR5 1692 aaKnown RBP11.69□□□□□ -0.54
GIN1-201ENST00000399004 CD109Q6YHK3 1445 aa11.69□□□□□ -0.54
GIN1-201ENST00000399004 COL3A1P02461 1466 aaPredicted RBP11.69□□□□□ -0.54
GIN1-201ENST00000399004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.69□□□□□ -0.54
GIN1-201ENST00000399004 AKAP12Q02952 1782 aa11.68□□□□□ -0.54
GIN1-201ENST00000399004 PTPRMP28827 1452 aa11.68□□□□□ -0.54
GIN1-201ENST00000399004 CDCA8Q53HL2 280 aa11.67□□□□□ -0.54
GIN1-201ENST00000399004 NGEFQ8N5V2 710 aa11.67□□□□□ -0.54
GIN1-201ENST00000399004 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
GIN1-201ENST00000399004 MON2Q7Z3U7 1717 aa11.67□□□□□ -0.54
GIN1-201ENST00000399004 RRP1P56182 461 aaKnown RBP11.67□□□□□ -0.54
GIN1-201ENST00000399004 AFAP1Q8N556 730 aa11.67□□□□□ -0.54
GIN1-201ENST00000399004 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
GIN1-201ENST00000399004 TOPAZ1Q8N9V7 1692 aa11.66□□□□□ -0.54
GIN1-201ENST00000399004 CRBNQ96SW2 442 aa11.66□□□□□ -0.54
GIN1-201ENST00000399004 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.54
GIN1-201ENST00000399004 NSD2O96028 1365 aa11.65□□□□□ -0.54
GIN1-201ENST00000399004 NINLQ9Y2I6 1382 aa11.65□□□□□ -0.54
GIN1-201ENST00000399004 PANK3Q9H999 370 aa11.65□□□□□ -0.54
GIN1-201ENST00000399004 NRKQ7Z2Y5 1582 aa11.65□□□□□ -0.55
GIN1-201ENST00000399004 ARHGEF40Q8TER5 1519 aa11.64□□□□□ -0.55
GIN1-201ENST00000399004 C20orf194Q5TEA3 1177 aa11.64□□□□□ -0.55
GIN1-201ENST00000399004 CD163L1Q9NR16 1453 aa11.64□□□□□ -0.55
GIN1-201ENST00000399004 PLEKHH1Q9ULM0 1364 aa11.64□□□□□ -0.55
GIN1-201ENST00000399004 PPP2R1AP30153 589 aa11.64□□□□□ -0.55
GIN1-201ENST00000399004 C14orf93Q9H972 538 aaKnown RBP11.64□□□□□ -0.55
GIN1-201ENST00000399004 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
GIN1-201ENST00000399004 NALCNQ8IZF0 1738 aa11.62□□□□□ -0.55
GIN1-201ENST00000399004 ALKQ9UM73 1620 aa11.62□□□□□ -0.55
GIN1-201ENST00000399004 KDM2BQ8NHM5 1336 aa11.62□□□□□ -0.55
GIN1-201ENST00000399004 SLKQ9H2G2 1235 aaPredicted RBP11.61□□□□□ -0.55
GIN1-201ENST00000399004 CPS1P31327 1500 aa11.61□□□□□ -0.55
GIN1-201ENST00000399004 FRAT1Q92837 279 aaPredicted RBP11.6□□□□□ -0.55
GIN1-201ENST00000399004 ADGRF5Q8IZF2 1346 aa11.6□□□□□ -0.55
GIN1-201ENST00000399004 C3P01024 1663 aa11.6□□□□□ -0.55
GIN1-201ENST00000399004 MS4A1P11836 297 aa11.6□□□□□ -0.55
GIN1-201ENST00000399004 NKTRP30414 1462 aaKnown RBP11.6□□□□□ -0.55
GIN1-201ENST00000399004 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
GIN1-201ENST00000399004 NFKBIBQ15653 356 aa11.59□□□□□ -0.55
GIN1-201ENST00000399004 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
GIN1-201ENST00000399004 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.56
GIN1-201ENST00000399004 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.56
GIN1-201ENST00000399004 BACH2Q9BYV9 841 aa11.58□□□□□ -0.56
GIN1-201ENST00000399004 UBR1Q8IWV7 1749 aa11.57□□□□□ -0.56
GIN1-201ENST00000399004 TCERG1O14776 1098 aaKnown RBP11.57□□□□□ -0.56
GIN1-201ENST00000399004 RGPD1P0DJD0 1748 aa11.56□□□□□ -0.56
GIN1-201ENST00000399004 ANKRD36BQ8N2N9 1353 aa11.56□□□□□ -0.56
GIN1-201ENST00000399004 CARD14Q9BXL6 1004 aa11.56□□□□□ -0.56
GIN1-201ENST00000399004 CANXP27824 592 aaKnown RBP11.56□□□□□ -0.56
GIN1-201ENST00000399004 LRRC7Q96NW7 1537 aa11.56□□□□□ -0.56
GIN1-201ENST00000399004 ABCC11Q96J66 1382 aa11.56□□□□□ -0.56
GIN1-201ENST00000399004 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
GIN1-201ENST00000399004 GZF1Q9H116 711 aaPredicted RBP11.55□□□□□ -0.56
GIN1-201ENST00000399004 TECPR2O15040 1411 aa11.55□□□□□ -0.56
GIN1-201ENST00000399004 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
GIN1-201ENST00000399004 GSE1Q14687 1217 aa11.55□□□□□ -0.56
GIN1-201ENST00000399004 N4BP2Q86UW6 1770 aaPredicted RBP11.55□□□□□ -0.56
GIN1-201ENST00000399004 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
GIN1-201ENST00000399004 SLFN5Q08AF3 891 aa11.54□□□□□ -0.56
GIN1-201ENST00000399004 CCDC27Q2M243 656 aa11.54□□□□□ -0.56
GIN1-201ENST00000399004 ATP7BP35670 1465 aa11.54□□□□□ -0.56
GIN1-201ENST00000399004 KIF3BO15066 747 aa11.53□□□□□ -0.56
GIN1-201ENST00000399004 CFAP65Q6ZU64 1925 aaKnown RBP11.53□□□□□ -0.56
GIN1-201ENST00000399004 PNPLA6Q8IY17 1366 aa11.53□□□□□ -0.56
GIN1-201ENST00000399004 ADAMTS8Q9UP79 889 aa11.53□□□□□ -0.56
GIN1-201ENST00000399004 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.56
GIN1-201ENST00000399004 A2ML1A8K2U0 1454 aa11.51□□□□□ -0.57
GIN1-201ENST00000399004 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
GIN1-201ENST00000399004 CENPJQ9HC77 1338 aaPredicted RBP11.51□□□□□ -0.57
GIN1-201ENST00000399004 MARF1Q9Y4F3 1742 aaKnown RBP11.5□□□□□ -0.57
GIN1-201ENST00000399004 PPIP5K1Q6PFW1 1433 aa11.5□□□□□ -0.57
GIN1-201ENST00000399004 NSD3Q9BZ95 1437 aa11.5□□□□□ -0.57
GIN1-201ENST00000399004 CFAP70Q5T0N1 1121 aa11.5□□□□□ -0.57
GIN1-201ENST00000399004 YTHDC2Q9H6S0 1430 aaKnown RBP11.5□□□□□ -0.57
GIN1-201ENST00000399004 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
GIN1-201ENST00000399004 BCL2L13Q9BXK5 485 aa11.49□□□□□ -0.57
GIN1-201ENST00000399004 KNSTRNQ9Y448 316 aa11.49□□□□□ -0.57
GIN1-201ENST00000399004 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
GIN1-201ENST00000399004 AAMPQ13685 434 aa11.48□□□□□ -0.57
GIN1-201ENST00000399004 FMN2Q9NZ56 1722 aa11.48□□□□□ -0.57
GIN1-201ENST00000399004 SLC52A1Q9NWF4 448 aa11.48□□□□□ -0.57
GIN1-201ENST00000399004 MAP2P11137 1827 aaKnown RBP11.47□□□□□ -0.57
GIN1-201ENST00000399004 CLUAP1Q96AJ1 413 aa11.47□□□□□ -0.57
GIN1-201ENST00000399004 POGKQ9P215 609 aa11.47□□□□□ -0.57
GIN1-201ENST00000399004 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.58
GIN1-201ENST00000399004 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms