RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 SAFB2Q14151 953 aaKnown RBP eCLIP23.14■■□□□ 1.29
CDH23-204ENST00000398792 STRCQ7RTU9 1775 aa23.14■■□□□ 1.29
CDH23-204ENST00000398792 NWD1Q149M9 1564 aa23.13■■□□□ 1.29
CDH23-204ENST00000398792 AMOTL2Q9Y2J4 779 aa23.12■■□□□ 1.29
CDH23-204ENST00000398792 WAPLQ7Z5K2 1190 aa23.11■■□□□ 1.29
CDH23-204ENST00000398792 ADGRB2O60241 1585 aa23.11■■□□□ 1.29
CDH23-204ENST00000398792 EVC2Q86UK5 1308 aa23.1■■□□□ 1.29
CDH23-204ENST00000398792 MINK1Q8N4C8 1332 aaPredicted RBP23.1■■□□□ 1.29
CDH23-204ENST00000398792 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.08■■□□□ 1.29
CDH23-204ENST00000398792 KCNA6P17658 529 aa23.06■■□□□ 1.28
CDH23-204ENST00000398792 PUS7Q96PZ0 661 aaKnown RBP23.04■■□□□ 1.28
CDH23-204ENST00000398792 NKTRP30414 1462 aaKnown RBP23.03■■□□□ 1.28
CDH23-204ENST00000398792 NALCNQ8IZF0 1738 aa23■■□□□ 1.27
CDH23-204ENST00000398792 ATAD2Q6PL18 1390 aa23■■□□□ 1.27
CDH23-204ENST00000398792 SRPK2P78362 688 aaKnown RBP22.99■■□□□ 1.27
CDH23-204ENST00000398792 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
CDH23-204ENST00000398792 STRCP1A6NGW2 1772 aa22.98■■□□□ 1.27
CDH23-204ENST00000398792 CDK19Q9BWU1 502 aa22.98■■□□□ 1.27
CDH23-204ENST00000398792 WASLO00401 505 aaPredicted RBP22.97■■□□□ 1.27
CDH23-204ENST00000398792 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
CDH23-204ENST00000398792 CDC42BPGQ6DT37 1551 aa22.95■■□□□ 1.27
CDH23-204ENST00000398792 MIER1Q8N108 512 aa22.95■■□□□ 1.26
CDH23-204ENST00000398792 ATP7BP35670 1465 aa22.94■■□□□ 1.26
CDH23-204ENST00000398792 PANK3Q9H999 370 aa22.94■■□□□ 1.26
CDH23-204ENST00000398792 ADGRL3Q9HAR2 1447 aa22.94■■□□□ 1.26
CDH23-204ENST00000398792 TOPAZ1Q8N9V7 1692 aa22.93■■□□□ 1.26
CDH23-204ENST00000398792 FMN2Q9NZ56 1722 aa22.92■■□□□ 1.26
CDH23-204ENST00000398792 ANP32CO43423 234 aa22.91■■□□□ 1.26
CDH23-204ENST00000398792 TMC1Q8TDI8 760 aa22.91■■□□□ 1.26
CDH23-204ENST00000398792 USP32Q8NFA0 1604 aa22.91■■□□□ 1.26
CDH23-204ENST00000398792 ANKRD36BQ8N2N9 1353 aa22.9■■□□□ 1.26
CDH23-204ENST00000398792 PER1O15534 1290 aaPredicted RBP22.9■■□□□ 1.26
CDH23-204ENST00000398792 SLC12A5Q9H2X9 1139 aa22.9■■□□□ 1.26
CDH23-204ENST00000398792 ITSN1Q15811 1721 aa22.88■■□□□ 1.25
CDH23-204ENST00000398792 PRR36Q9H6K5 1346 aa22.88■■□□□ 1.25
CDH23-204ENST00000398792 CD163L1Q9NR16 1453 aa22.88■■□□□ 1.25
CDH23-204ENST00000398792 PPIP5K1Q6PFW1 1433 aa22.86■■□□□ 1.25
CDH23-204ENST00000398792 ANKARQ7Z5J8 1434 aa22.86■■□□□ 1.25
CDH23-204ENST00000398792 NUDT16Q96DE0 195 aaKnown RBP22.86■■□□□ 1.25
CDH23-204ENST00000398792 DMRT2Q9Y5R5 561 aa22.86■■□□□ 1.25
CDH23-204ENST00000398792 A0A1W2PP64 1363 aa22.85■■□□□ 1.25
CDH23-204ENST00000398792 PROSER2Q86WR7 435 aaPredicted RBP22.85■■□□□ 1.25
CDH23-204ENST00000398792 RBM33Q96EV2 1170 aaKnown RBP22.85■■□□□ 1.25
CDH23-204ENST00000398792 NSD3Q9BZ95 1437 aa22.84■■□□□ 1.25
CDH23-204ENST00000398792 NCOA3Q9Y6Q9 1424 aa22.84■■□□□ 1.25
CDH23-204ENST00000398792 PRKRIP1Q9H875 184 aaPredicted RBP22.83■■□□□ 1.25
CDH23-204ENST00000398792 TMEM94Q12767 1356 aa22.83■■□□□ 1.25
CDH23-204ENST00000398792 CARD14Q9BXL6 1004 aa22.82■■□□□ 1.24
CDH23-204ENST00000398792 CABP1Q9NZU7 370 aa22.82■■□□□ 1.24
CDH23-204ENST00000398792 KNSTRNQ9Y448 316 aa22.82■■□□□ 1.24
CDH23-204ENST00000398792 CCDC61Q9Y6R9 512 aa22.82■■□□□ 1.24
CDH23-204ENST00000398792 ZNF335Q9H4Z2 1342 aaPredicted RBP22.82■■□□□ 1.24
CDH23-204ENST00000398792 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
CDH23-204ENST00000398792 XIRP1Q702N8 1843 aaKnown RBP22.81■■□□□ 1.24
CDH23-204ENST00000398792 KTN1Q86UP2 1357 aaKnown RBP22.81■■□□□ 1.24
CDH23-204ENST00000398792 RGPD8O14715 1765 aaPredicted RBP22.8■■□□□ 1.24
CDH23-204ENST00000398792 MON2Q7Z3U7 1717 aa22.8■■□□□ 1.24
CDH23-204ENST00000398792 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
CDH23-204ENST00000398792 TERF2IPQ9NYB0 399 aa22.8■■□□□ 1.24
CDH23-204ENST00000398792 LRRC7Q96NW7 1537 aa22.8■■□□□ 1.24
CDH23-204ENST00000398792 CPSF1Q10570 1443 aaKnown RBP22.79■■□□□ 1.24
CDH23-204ENST00000398792 C14orf37Q86TY3 774 aa22.79■■□□□ 1.24
CDH23-204ENST00000398792 DCCP43146 1447 aa22.79■■□□□ 1.24
CDH23-204ENST00000398792 NUTM2FA1L443 756 aa22.79■■□□□ 1.24
CDH23-204ENST00000398792 AMER1Q5JTC6 1135 aaPredicted RBP22.79■■□□□ 1.24
CDH23-204ENST00000398792 PARD3Q8TEW0 1356 aa22.78■■□□□ 1.24
CDH23-204ENST00000398792 HDGFL2Q7Z4V5 671 aaPredicted RBP22.77■■□□□ 1.24
CDH23-204ENST00000398792 NRKQ7Z2Y5 1582 aa22.76■■□□□ 1.23
CDH23-204ENST00000398792 CNGB1Q14028 1251 aaPredicted RBP22.75■■□□□ 1.23
CDH23-204ENST00000398792 CC2D1BQ5T0F9 858 aaKnown RBP22.75■■□□□ 1.23
CDH23-204ENST00000398792 PLEKHG3A1L390 1219 aa22.74■■□□□ 1.23
CDH23-204ENST00000398792 CCER2I3L3R5 266 aa22.74■■□□□ 1.23
CDH23-204ENST00000398792 RALBP1Q15311 655 aa22.74■■□□□ 1.23
CDH23-204ENST00000398792 C19orf44Q9H6X5 657 aa22.74■■□□□ 1.23
CDH23-204ENST00000398792 KIF20BQ96Q89 1820 aa22.73■■□□□ 1.23
CDH23-204ENST00000398792 EDC4Q6P2E9 1401 aaKnown RBP22.72■■□□□ 1.23
CDH23-204ENST00000398792 CGNL1Q0VF96 1302 aa22.72■■□□□ 1.23
CDH23-204ENST00000398792 ANKRD26Q9UPS8 1709 aa22.72■■□□□ 1.23
CDH23-204ENST00000398792 POLR3AO14802 1390 aaPredicted RBP22.71■■□□□ 1.23
CDH23-204ENST00000398792 NSD2O96028 1365 aa22.71■■□□□ 1.23
CDH23-204ENST00000398792 MSH6P52701 1360 aa22.71■■□□□ 1.23
CDH23-204ENST00000398792 ACEP12821 1306 aa22.7■■□□□ 1.22
CDH23-204ENST00000398792 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
CDH23-204ENST00000398792 USP6P35125 1406 aa22.69■■□□□ 1.22
CDH23-204ENST00000398792 MST1RQ04912 1400 aa22.69■■□□□ 1.22
CDH23-204ENST00000398792 MYBBP1AQ9BQG0 1328 aaKnown RBP22.68■■□□□ 1.22
CDH23-204ENST00000398792 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
CDH23-204ENST00000398792 LTBP4Q8N2S1 1624 aa22.68■■□□□ 1.22
CDH23-204ENST00000398792 KIF1AQ12756 1690 aa22.68■■□□□ 1.22
CDH23-204ENST00000398792 ZNF692Q9BU19 519 aaPredicted RBP22.68■■□□□ 1.22
CDH23-204ENST00000398792 ATF3P18847 181 aa22.66■■□□□ 1.22
CDH23-204ENST00000398792 PMFBP1Q8TBY8 1022 aa22.66■■□□□ 1.22
CDH23-204ENST00000398792 CADPS2Q86UW7 1296 aa22.64■■□□□ 1.22
CDH23-204ENST00000398792 SSH2Q76I76 1423 aa22.64■■□□□ 1.21
CDH23-204ENST00000398792 PHF8Q9UPP1 1060 aa22.64■■□□□ 1.21
CDH23-204ENST00000398792 NGDNQ8NEJ9 315 aaKnown RBP22.63■■□□□ 1.21
CDH23-204ENST00000398792 FYB1O15117 783 aa22.61■■□□□ 1.21
CDH23-204ENST00000398792 ESCO1Q5FWF5 840 aa22.61■■□□□ 1.21
CDH23-204ENST00000398792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.61■■□□□ 1.21
CDH23-204ENST00000398792 BRD4O60885 1362 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms