RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SPATA31E1Q6ZUB1 1445 aa18.07■□□□□ 0.48
TFF3-202ENST00000398431 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
TFF3-202ENST00000398431 FNBP4Q8N3X1 1017 aaPredicted RBP18.07■□□□□ 0.48
TFF3-202ENST00000398431 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
TFF3-202ENST00000398431 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
TFF3-202ENST00000398431 STK26Q9P289 416 aa18.05■□□□□ 0.48
TFF3-202ENST00000398431 USP21Q9UK80 565 aa18.05■□□□□ 0.48
TFF3-202ENST00000398431 FOXO3O43524 673 aa18.04■□□□□ 0.48
TFF3-202ENST00000398431 TMEM132EQ6IEE7 984 aa18.04■□□□□ 0.48
TFF3-202ENST00000398431 CCDC144AA2RUR9 1427 aa18.03■□□□□ 0.48
TFF3-202ENST00000398431 TECPR2O15040 1411 aa18.03■□□□□ 0.48
TFF3-202ENST00000398431 LRPPRCP42704 1394 aaKnown RBP18.03■□□□□ 0.48
TFF3-202ENST00000398431 ABCC11Q96J66 1382 aa18.03■□□□□ 0.48
TFF3-202ENST00000398431 PLEKHH1Q9ULM0 1364 aa18.03■□□□□ 0.48
TFF3-202ENST00000398431 NPHP3Q7Z494 1330 aa18.02■□□□□ 0.48
TFF3-202ENST00000398431 COL22A1Q8NFW1 1626 aaPredicted RBP18.02■□□□□ 0.48
TFF3-202ENST00000398431 XPCQ01831 940 aaPredicted RBP18.02■□□□□ 0.48
TFF3-202ENST00000398431 CDC42BPGQ6DT37 1551 aa18.02■□□□□ 0.48
TFF3-202ENST00000398431 TRPC5Q9UL62 973 aaPredicted RBP18.02■□□□□ 0.48
TFF3-202ENST00000398431 ANKRD30BQ9BXX2 1392 aa18.02■□□□□ 0.47
TFF3-202ENST00000398431 PXDNQ92626 1479 aa18.01■□□□□ 0.47
TFF3-202ENST00000398431 NUTM2FA1L443 756 aa18.01■□□□□ 0.47
TFF3-202ENST00000398431 MYOM2P54296 1465 aa18.01■□□□□ 0.47
TFF3-202ENST00000398431 IFT172Q9UG01 1749 aa18■□□□□ 0.47
TFF3-202ENST00000398431 ATRNO75882 1429 aa17.99■□□□□ 0.47
TFF3-202ENST00000398431 SIRT1Q96EB6 747 aa17.98■□□□□ 0.47
TFF3-202ENST00000398431 BCL9LQ86UU0 1499 aa17.98■□□□□ 0.47
TFF3-202ENST00000398431 PIK3C2GO75747 1445 aa17.98■□□□□ 0.47
TFF3-202ENST00000398431 C14orf93Q9H972 538 aaKnown RBP17.97■□□□□ 0.47
TFF3-202ENST00000398431 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.47
TFF3-202ENST00000398431 KNDC1Q76NI1 1749 aa17.94■□□□□ 0.46
TFF3-202ENST00000398431 SPATA31A3Q5VYP0 1347 aa17.94■□□□□ 0.46
TFF3-202ENST00000398431 ATAD2Q6PL18 1390 aa17.93■□□□□ 0.46
TFF3-202ENST00000398431 MARF1Q9Y4F3 1742 aaKnown RBP17.93■□□□□ 0.46
TFF3-202ENST00000398431 CFAP70Q5T0N1 1121 aa17.93■□□□□ 0.46
TFF3-202ENST00000398431 KRT28Q7Z3Y7 464 aa17.93■□□□□ 0.46
TFF3-202ENST00000398431 GJD4Q96KN9 370 aaPredicted RBP17.93■□□□□ 0.46
TFF3-202ENST00000398431 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
TFF3-202ENST00000398431 NRXN1Q9ULB1 1477 aa17.91■□□□□ 0.46
TFF3-202ENST00000398431 RGPD8O14715 1765 aaPredicted RBP17.89■□□□□ 0.45
TFF3-202ENST00000398431 PHF8Q9UPP1 1060 aa17.89■□□□□ 0.45
TFF3-202ENST00000398431 SLIT2O94813 1529 aa17.88■□□□□ 0.45
TFF3-202ENST00000398431 UNC5CLQ8IV45 518 aa17.88■□□□□ 0.45
TFF3-202ENST00000398431 DHX57Q6P158 1386 aaKnown RBP17.88■□□□□ 0.45
TFF3-202ENST00000398431 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
TFF3-202ENST00000398431 CABLES1Q8TDN4 633 aa17.86■□□□□ 0.45
TFF3-202ENST00000398431 PRAM1Q96QH2 718 aa17.86■□□□□ 0.45
TFF3-202ENST00000398431 KIF1AQ12756 1690 aa17.86■□□□□ 0.45
TFF3-202ENST00000398431 SAFB2Q14151 953 aaKnown RBP eCLIP17.85■□□□□ 0.45
TFF3-202ENST00000398431 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.84■□□□□ 0.45
TFF3-202ENST00000398431 GLI3P10071 1580 aa17.84■□□□□ 0.45
TFF3-202ENST00000398431 PSME1Q06323 249 aa17.84■□□□□ 0.45
TFF3-202ENST00000398431 CCDC125Q86Z20 511 aa17.84■□□□□ 0.45
TFF3-202ENST00000398431 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.45
TFF3-202ENST00000398431 SBNO1A3KN83 1393 aa17.82■□□□□ 0.44
TFF3-202ENST00000398431 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
TFF3-202ENST00000398431 RAB3GAP2Q9H2M9 1393 aa17.81■□□□□ 0.44
TFF3-202ENST00000398431 USP32Q8NFA0 1604 aa17.81■□□□□ 0.44
TFF3-202ENST00000398431 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
TFF3-202ENST00000398431 PMFBP1Q8TBY8 1022 aa17.81■□□□□ 0.44
TFF3-202ENST00000398431 POGKQ9P215 609 aa17.8■□□□□ 0.44
TFF3-202ENST00000398431 DLC1Q96QB1 1528 aa17.8■□□□□ 0.44
TFF3-202ENST00000398431 ADGRB1O14514 1584 aa17.79■□□□□ 0.44
TFF3-202ENST00000398431 FAM83GA6ND36 823 aa17.79■□□□□ 0.44
TFF3-202ENST00000398431 PLEKHG5O94827 1062 aa17.79■□□□□ 0.44
TFF3-202ENST00000398431 VPS72Q15906 364 aa17.79■□□□□ 0.44
TFF3-202ENST00000398431 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
TFF3-202ENST00000398431 TRAK1Q9UPV9 953 aa17.79■□□□□ 0.44
TFF3-202ENST00000398431 SEPT12Q8IYM1 358 aa17.78■□□□□ 0.44
TFF3-202ENST00000398431 EP400Q96L91 3159 aa17.78■□□□□ 0.44
TFF3-202ENST00000398431 BRWD3Q6RI45 1802 aa17.77■□□□□ 0.44
TFF3-202ENST00000398431 PRR36Q9H6K5 1346 aa17.77■□□□□ 0.44
TFF3-202ENST00000398431 LMOD2Q6P5Q4 547 aa17.77■□□□□ 0.44
TFF3-202ENST00000398431 HIRIP3Q9BW71 556 aaPredicted RBP17.77■□□□□ 0.44
TFF3-202ENST00000398431 KDM2AQ9Y2K7 1162 aa17.77■□□□□ 0.44
TFF3-202ENST00000398431 ANKARQ7Z5J8 1434 aa17.77■□□□□ 0.44
TFF3-202ENST00000398431 HAP1P54257 671 aaPredicted RBP17.76■□□□□ 0.43
TFF3-202ENST00000398431 ARHGEF10O15013 1369 aa17.76■□□□□ 0.43
TFF3-202ENST00000398431 MINK1Q8N4C8 1332 aaPredicted RBP17.74■□□□□ 0.43
TFF3-202ENST00000398431 BLMP54132 1417 aaPredicted RBP17.74■□□□□ 0.43
TFF3-202ENST00000398431 DEFB132Q7Z7B7 95 aa17.74■□□□□ 0.43
TFF3-202ENST00000398431 DCAF11Q8TEB1 546 aa17.74■□□□□ 0.43
TFF3-202ENST00000398431 ABCA3Q99758 1704 aa17.74■□□□□ 0.43
TFF3-202ENST00000398431 ADGRB2O60241 1585 aa17.74■□□□□ 0.43
TFF3-202ENST00000398431 NWD2Q9ULI1 1742 aa17.73■□□□□ 0.43
TFF3-202ENST00000398431 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
TFF3-202ENST00000398431 PLCH1Q4KWH8 1693 aa17.73■□□□□ 0.43
TFF3-202ENST00000398431 TRPM3Q9HCF6 1732 aaPredicted RBP17.72■□□□□ 0.43
TFF3-202ENST00000398431 CCDC9Q9Y3X0 531 aaKnown RBP17.71■□□□□ 0.43
TFF3-202ENST00000398431 KRT27Q7Z3Y8 459 aa17.7■□□□□ 0.42
TFF3-202ENST00000398431 STAC3Q96MF2 364 aa17.7■□□□□ 0.42
TFF3-202ENST00000398431 SRCAPQ6ZRS2 3230 aa17.7■□□□□ 0.42
TFF3-202ENST00000398431 ALS2Q96Q42 1657 aa17.69■□□□□ 0.42
TFF3-202ENST00000398431 HRCP23327 699 aa17.69■□□□□ 0.42
TFF3-202ENST00000398431 BTG4Q9NY30 223 aa17.69■□□□□ 0.42
TFF3-202ENST00000398431 GPRASP1Q5JY77 1395 aa17.68■□□□□ 0.42
TFF3-202ENST00000398431 TULP4Q9NRJ4 1543 aa17.67■□□□□ 0.42
TFF3-202ENST00000398431 NRAPQ86VF7 1730 aa17.67■□□□□ 0.42
TFF3-202ENST00000398431 FAM98CQ17RN3 349 aaKnown RBP17.66■□□□□ 0.42
TFF3-202ENST00000398431 NGDNQ8NEJ9 315 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 246.5 ms