RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 KDM4FA0A1W2PPD8 638 aa5.44□□□□□ -1.54
FNDC3A-202ENST00000398316 PPP1R15AO75807 674 aaPredicted RBP5.44□□□□□ -1.54
FNDC3A-202ENST00000398316 EIF3AQ14152 1382 aaKnown RBP5.44□□□□□ -1.54
FNDC3A-202ENST00000398316 TBX22Q9Y458 520 aa5.43□□□□□ -1.54
FNDC3A-202ENST00000398316 QSER1Q2KHR3 1735 aa5.43□□□□□ -1.54
FNDC3A-202ENST00000398316 KCNH8Q96L42 1107 aa5.43□□□□□ -1.54
FNDC3A-202ENST00000398316 NFAT5O94916 1531 aa5.43□□□□□ -1.54
FNDC3A-202ENST00000398316 LRP6O75581 1613 aa5.43□□□□□ -1.54
FNDC3A-202ENST00000398316 CFAP65Q6ZU64 1925 aaKnown RBP5.43□□□□□ -1.54
FNDC3A-202ENST00000398316 RREB1Q92766 1687 aa5.42□□□□□ -1.54
FNDC3A-202ENST00000398316 ROCK2O75116 1388 aaKnown RBP5.42□□□□□ -1.54
FNDC3A-202ENST00000398316 WASHC2AQ641Q2 1341 aa5.42□□□□□ -1.54
FNDC3A-202ENST00000398316 WASHC2CQ9Y4E1 1318 aa5.42□□□□□ -1.54
FNDC3A-202ENST00000398316 PXDNQ92626 1479 aa5.42□□□□□ -1.54
FNDC3A-202ENST00000398316 NCBP3Q53F19 620 aaKnown RBP5.41□□□□□ -1.54
FNDC3A-202ENST00000398316 RRP7BPQ9NSQ0 103 aa5.41□□□□□ -1.54
FNDC3A-202ENST00000398316 LTN1O94822 1766 aa5.41□□□□□ -1.54
FNDC3A-202ENST00000398316 PHLPP1O60346 1717 aa5.41□□□□□ -1.54
FNDC3A-202ENST00000398316 GLI3P10071 1580 aa5.41□□□□□ -1.54
FNDC3A-202ENST00000398316 NSD2O96028 1365 aa5.41□□□□□ -1.54
FNDC3A-202ENST00000398316 USP31Q70CQ4 1352 aa5.41□□□□□ -1.54
FNDC3A-202ENST00000398316 COL3A1P02461 1466 aaPredicted RBP5.41□□□□□ -1.54
FNDC3A-202ENST00000398316 PLPPR3Q6T4P5 718 aa5.41□□□□□ -1.54
FNDC3A-202ENST00000398316 KIF24Q5T7B8 1368 aa5.4□□□□□ -1.54
FNDC3A-202ENST00000398316 ERICH6Q7L0X2 663 aa5.4□□□□□ -1.54
FNDC3A-202ENST00000398316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.4□□□□□ -1.54
FNDC3A-202ENST00000398316 HNRNPUL2Q1KMD3 747 aaKnown RBP5.4□□□□□ -1.54
FNDC3A-202ENST00000398316 COL14A1Q05707 1796 aaKnown RBP5.4□□□□□ -1.55
FNDC3A-202ENST00000398316 KIF3BO15066 747 aa5.39□□□□□ -1.55
FNDC3A-202ENST00000398316 THSD7AQ9UPZ6 1657 aa5.39□□□□□ -1.55
FNDC3A-202ENST00000398316 ROBO1Q9Y6N7 1651 aa5.38□□□□□ -1.55
FNDC3A-202ENST00000398316 FAM50AQ14320 339 aaKnown RBP5.38□□□□□ -1.55
FNDC3A-202ENST00000398316 UBR2Q8IWV8 1755 aa5.38□□□□□ -1.55
FNDC3A-202ENST00000398316 TESK2Q96S53 571 aa5.38□□□□□ -1.55
FNDC3A-202ENST00000398316 IDI1Q13907 227 aa5.37□□□□□ -1.55
FNDC3A-202ENST00000398316 ATP1B4Q9UN42 357 aaPredicted RBP5.37□□□□□ -1.55
FNDC3A-202ENST00000398316 OVOS2A0A0J9YW53 1432 aa5.36□□□□□ -1.55
FNDC3A-202ENST00000398316 OVOS2Q6IE36 1432 aa5.36□□□□□ -1.55
FNDC3A-202ENST00000398316 VGFO15240 615 aaPredicted RBP5.36□□□□□ -1.55
FNDC3A-202ENST00000398316 SLC4A1APQ9BWU0 796 aaKnown RBP5.36□□□□□ -1.55
FNDC3A-202ENST00000398316 HDGFP51858 240 aaKnown RBP5.36□□□□□ -1.55
FNDC3A-202ENST00000398316 SBNO1A3KN83 1393 aa5.35□□□□□ -1.55
FNDC3A-202ENST00000398316 AATKQ6ZMQ8 1374 aa5.35□□□□□ -1.55
FNDC3A-202ENST00000398316 THEMISQ8N1K5 641 aaPredicted RBP5.35□□□□□ -1.55
FNDC3A-202ENST00000398316 METP08581 1390 aa5.35□□□□□ -1.55
FNDC3A-202ENST00000398316 KDM3BQ7LBC6 1761 aa5.34□□□□□ -1.55
FNDC3A-202ENST00000398316 PNPLA6Q8IY17 1366 aa5.34□□□□□ -1.55
FNDC3A-202ENST00000398316 ESF1Q9H501 851 aaKnown RBP5.34□□□□□ -1.55
FNDC3A-202ENST00000398316 MAP2P11137 1827 aaKnown RBP5.34□□□□□ -1.56
FNDC3A-202ENST00000398316 OVOS2A0A0G2JMS6 1433 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 ATAD2Q6PL18 1390 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 PARD3Q8TEW0 1356 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 NBPF8Q3BBV2 869 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 MRC1P22897 1456 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 BCL9O00512 1426 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 EDC4Q6P2E9 1401 aaKnown RBP5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 IBTKQ9P2D0 1353 aaPredicted RBP5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 LAMB4A4D0S4 1761 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 ANKRD36BQ8N2N9 1353 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 L3MBTL2Q969R5 705 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 USP47Q96K76 1375 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 ROBO2Q9HCK4 1378 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 SCN11AQ9UI33 1791 aa5.33□□□□□ -1.56
FNDC3A-202ENST00000398316 KCNA6P17658 529 aa5.32□□□□□ -1.56
FNDC3A-202ENST00000398316 ZNF777Q9ULD5 760 aaPredicted RBP5.32□□□□□ -1.56
FNDC3A-202ENST00000398316 TONSLQ96HA7 1378 aa5.32□□□□□ -1.56
FNDC3A-202ENST00000398316 ADGRF5Q8IZF2 1346 aa5.32□□□□□ -1.56
FNDC3A-202ENST00000398316 ILDR1Q86SU0 546 aaPredicted RBP5.32□□□□□ -1.56
FNDC3A-202ENST00000398316 RTL1A6NKG5 1358 aa5.32□□□□□ -1.56
FNDC3A-202ENST00000398316 CCDC7Q96M83 1385 aa5.32□□□□□ -1.56
FNDC3A-202ENST00000398316 PLEKHG3A1L390 1219 aa5.32□□□□□ -1.56
FNDC3A-202ENST00000398316 C1orf167Q5SNV9 1468 aa5.32□□□□□ -1.56
FNDC3A-202ENST00000398316 CACNA1FO60840 1977 aa5.31□□□□□ -1.56
FNDC3A-202ENST00000398316 USP19O94966 1318 aa5.31□□□□□ -1.56
FNDC3A-202ENST00000398316 DLG5Q8TDM6 1919 aa5.31□□□□□ -1.56
FNDC3A-202ENST00000398316 CPDO75976 1380 aa5.31□□□□□ -1.56
FNDC3A-202ENST00000398316 DMRT2Q9Y5R5 561 aa5.3□□□□□ -1.56
FNDC3A-202ENST00000398316 SBF2Q86WG5 1849 aa5.3□□□□□ -1.56
FNDC3A-202ENST00000398316 TMEM94Q12767 1356 aa5.3□□□□□ -1.56
FNDC3A-202ENST00000398316 LY75O60449 1722 aa5.3□□□□□ -1.56
FNDC3A-202ENST00000398316 LTKP29376 864 aa5.3□□□□□ -1.56
FNDC3A-202ENST00000398316 BLMP54132 1417 aaPredicted RBP5.3□□□□□ -1.56
FNDC3A-202ENST00000398316 USP6P35125 1406 aa5.3□□□□□ -1.56
FNDC3A-202ENST00000398316 CHIC2Q9UKJ5 165 aa5.29□□□□□ -1.56
FNDC3A-202ENST00000398316 RGPD5Q99666 1765 aa5.29□□□□□ -1.56
FNDC3A-202ENST00000398316 COL5A3P25940 1745 aaPredicted RBP5.29□□□□□ -1.56
FNDC3A-202ENST00000398316 NHSQ6T4R5 1651 aa5.29□□□□□ -1.56
FNDC3A-202ENST00000398316 PER1O15534 1290 aaPredicted RBP5.28□□□□□ -1.56
FNDC3A-202ENST00000398316 FBXO31Q5XUX0 539 aaPredicted RBP5.28□□□□□ -1.56
FNDC3A-202ENST00000398316 C5P01031 1676 aa5.28□□□□□ -1.56
FNDC3A-202ENST00000398316 DISP3Q9P2K9 1392 aa5.28□□□□□ -1.56
FNDC3A-202ENST00000398316 ARID3CA6NKF2 412 aa5.27□□□□□ -1.57
FNDC3A-202ENST00000398316 TNS1Q9HBL0 1735 aaKnown RBP5.27□□□□□ -1.57
FNDC3A-202ENST00000398316 RANGAP1P46060 587 aaPredicted RBP5.27□□□□□ -1.57
FNDC3A-202ENST00000398316 ANKLE2Q86XL3 938 aa5.26□□□□□ -1.57
FNDC3A-202ENST00000398316 TOGARAM1Q9Y4F4 1720 aa5.26□□□□□ -1.57
FNDC3A-202ENST00000398316 TTC21AQ8NDW8 1320 aa5.26□□□□□ -1.57
FNDC3A-202ENST00000398316 RGPD2P0DJD1 1756 aa5.26□□□□□ -1.57
FNDC3A-202ENST00000398316 LAMB2P55268 1798 aa5.26□□□□□ -1.57
FNDC3A-202ENST00000398316 TNS3Q68CZ2 1445 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms