RNA–Protein interactions for RNA: ENST00000398080.5

SCML1-204, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCML1, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-204ENST00000398080 PTPRTO14522 1441 aa15.83■□□□□ 0.12
SCML1-204ENST00000398080 ZCCHC11Q5TAX3 1644 aaKnown RBP15.83■□□□□ 0.12
SCML1-204ENST00000398080 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
SCML1-204ENST00000398080 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
SCML1-204ENST00000398080 PANK2Q9BZ23 570 aa15.81■□□□□ 0.12
SCML1-204ENST00000398080 GGNBP2Q9H3C7 697 aa15.81■□□□□ 0.12
SCML1-204ENST00000398080 ANTXR1Q9H6X2 564 aa15.81■□□□□ 0.12
SCML1-204ENST00000398080 ZFYVE16Q7Z3T8 1539 aa15.81■□□□□ 0.12
SCML1-204ENST00000398080 CLASP1Q7Z460 1538 aa15.8■□□□□ 0.12
SCML1-204ENST00000398080 EXOSC9Q06265 439 aaKnown RBP15.8■□□□□ 0.12
SCML1-204ENST00000398080 MROH2AA6NES4 1674 aa15.8■□□□□ 0.12
SCML1-204ENST00000398080 RRAGDQ9NQL2 400 aaPredicted RBP15.8■□□□□ 0.12
SCML1-204ENST00000398080 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
SCML1-204ENST00000398080 SHPRHQ149N8 1683 aa15.78■□□□□ 0.12
SCML1-204ENST00000398080 TBC1D32Q96NH3 1257 aa15.78■□□□□ 0.12
SCML1-204ENST00000398080 NPC1L1Q9UHC9 1359 aa15.77■□□□□ 0.12
SCML1-204ENST00000398080 ITPRIPQ8IWB1 547 aa15.77■□□□□ 0.11
SCML1-204ENST00000398080 POLR3AO14802 1390 aaPredicted RBP15.77■□□□□ 0.11
SCML1-204ENST00000398080 TRIM27P14373 513 aa15.76■□□□□ 0.11
SCML1-204ENST00000398080 FTSJ3Q8IY81 847 aaKnown RBP15.76■□□□□ 0.11
SCML1-204ENST00000398080 SSH1Q8WYL5 1049 aa15.76■□□□□ 0.11
SCML1-204ENST00000398080 SMC4Q9NTJ3 1288 aa15.76■□□□□ 0.11
SCML1-204ENST00000398080 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
SCML1-204ENST00000398080 C1orf115Q9H7X2 142 aa15.75■□□□□ 0.11
SCML1-204ENST00000398080 MAPK8IP3Q9UPT6 1336 aa15.75■□□□□ 0.11
SCML1-204ENST00000398080 KANK1Q14678 1352 aa15.75■□□□□ 0.11
SCML1-204ENST00000398080 MAP3K4Q9Y6R4 1608 aa15.75■□□□□ 0.11
SCML1-204ENST00000398080 FANCAO15360 1455 aa15.74■□□□□ 0.11
SCML1-204ENST00000398080 MVPQ14764 893 aaKnown RBP15.74■□□□□ 0.11
SCML1-204ENST00000398080 NOB1Q9ULX3 412 aaKnown RBP15.74■□□□□ 0.11
SCML1-204ENST00000398080 ELL2O00472 640 aaPredicted RBP15.74■□□□□ 0.11
SCML1-204ENST00000398080 VIRMAQ69YN4 1812 aaKnown RBP15.73■□□□□ 0.11
SCML1-204ENST00000398080 PHF23Q9BUL5 403 aaPredicted RBP15.73■□□□□ 0.11
SCML1-204ENST00000398080 BECN1Q14457 450 aa15.73■□□□□ 0.11
SCML1-204ENST00000398080 DZIP1LQ8IYY4 767 aaKnown RBP15.73■□□□□ 0.11
SCML1-204ENST00000398080 TMEM57Q8N5G2 664 aa15.73■□□□□ 0.11
SCML1-204ENST00000398080 LNPKQ9C0E8 428 aa15.73■□□□□ 0.11
SCML1-204ENST00000398080 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
SCML1-204ENST00000398080 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
SCML1-204ENST00000398080 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
SCML1-204ENST00000398080 IQSEC2Q5JU85 1478 aa15.71■□□□□ 0.11
SCML1-204ENST00000398080 SHROOM2Q13796 1616 aa15.71■□□□□ 0.11
SCML1-204ENST00000398080 TET3O43151 1660 aa15.71■□□□□ 0.11
SCML1-204ENST00000398080 MROH1Q8NDA8 1641 aa15.71■□□□□ 0.11
SCML1-204ENST00000398080 MINK1Q8N4C8 1332 aaPredicted RBP15.71■□□□□ 0.11
SCML1-204ENST00000398080 XRCC6P12956 609 aaKnown RBP eCLIP15.71■□□□□ 0.11
SCML1-204ENST00000398080 C22orf23Q9BZE7 217 aa15.71■□□□□ 0.11
SCML1-204ENST00000398080 CD109Q6YHK3 1445 aa15.7■□□□□ 0.1
SCML1-204ENST00000398080 RWDD1Q9H446 243 aaPredicted RBP15.7■□□□□ 0.1
SCML1-204ENST00000398080 ADGRL1O94910 1474 aa15.7■□□□□ 0.1
SCML1-204ENST00000398080 ZKSCAN2Q63HK3 967 aa15.7■□□□□ 0.1
SCML1-204ENST00000398080 SRPK2P78362 688 aaKnown RBP15.69■□□□□ 0.1
SCML1-204ENST00000398080 C14orf93Q9H972 538 aaKnown RBP15.69■□□□□ 0.1
SCML1-204ENST00000398080 RBM42Q9BTD8 480 aaKnown RBP15.69■□□□□ 0.1
SCML1-204ENST00000398080 UPF2Q9HAU5 1272 aaKnown RBP15.69■□□□□ 0.1
SCML1-204ENST00000398080 PPRC1Q5VV67 1664 aaKnown RBP15.69■□□□□ 0.1
SCML1-204ENST00000398080 ZNF518AQ6AHZ1 1483 aa15.68■□□□□ 0.1
SCML1-204ENST00000398080 CD2BP2O95400 341 aaKnown RBP15.68■□□□□ 0.1
SCML1-204ENST00000398080 TMPOP42166 694 aaKnown RBP15.68■□□□□ 0.1
SCML1-204ENST00000398080 WDR63Q8IWG1 891 aa15.68■□□□□ 0.1
SCML1-204ENST00000398080 RAPGEF3O95398 923 aa15.67■□□□□ 0.1
SCML1-204ENST00000398080 DEPDC5O75140 1603 aa15.67■□□□□ 0.1
SCML1-204ENST00000398080 KIF1BO60333 1816 aa15.67■□□□□ 0.1
SCML1-204ENST00000398080 RTEL1-TNFRSF6BF6WH68 1400 aa15.67■□□□□ 0.1
SCML1-204ENST00000398080 RIPK4P57078 832 aa15.67■□□□□ 0.1
SCML1-204ENST00000398080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCML1-204ENST00000398080 ATAD2Q6PL18 1390 aa15.66■□□□□ 0.1
SCML1-204ENST00000398080 NPATQ14207 1427 aa15.66■□□□□ 0.1
SCML1-204ENST00000398080 HMOX1P09601 288 aa15.66■□□□□ 0.1
SCML1-204ENST00000398080 MCM4P33991 863 aa15.66■□□□□ 0.1
SCML1-204ENST00000398080 CFAP53Q96M91 514 aa15.66■□□□□ 0.1
SCML1-204ENST00000398080 PLEKHF1Q96S99 279 aa15.66■□□□□ 0.1
SCML1-204ENST00000398080 QRICH2Q9H0J4 1663 aa15.66■□□□□ 0.1
SCML1-204ENST00000398080 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
SCML1-204ENST00000398080 A0A1W2PP64 1363 aa15.65■□□□□ 0.1
SCML1-204ENST00000398080 TSPYL6Q8N831 410 aa15.64■□□□□ 0.09
SCML1-204ENST00000398080 VWDEQ8N2E2 1590 aa15.64■□□□□ 0.09
SCML1-204ENST00000398080 ATF7IPQ6VMQ6 1270 aa15.64■□□□□ 0.09
SCML1-204ENST00000398080 MYOM2P54296 1465 aa15.63■□□□□ 0.09
SCML1-204ENST00000398080 FYB1O15117 783 aa15.63■□□□□ 0.09
SCML1-204ENST00000398080 INO80Q9ULG1 1556 aaPredicted RBP15.62■□□□□ 0.09
SCML1-204ENST00000398080 TRAK2O60296 914 aa15.62■□□□□ 0.09
SCML1-204ENST00000398080 FAM43AQ8N2R8 423 aa15.62■□□□□ 0.09
SCML1-204ENST00000398080 PHACTR3Q96KR7 559 aa15.62■□□□□ 0.09
SCML1-204ENST00000398080 TULP4Q9NRJ4 1543 aa15.62■□□□□ 0.09
SCML1-204ENST00000398080 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
SCML1-204ENST00000398080 EFCAB6Q5THR3 1501 aa15.62■□□□□ 0.09
SCML1-204ENST00000398080 ADGRB1O14514 1584 aa15.61■□□□□ 0.09
SCML1-204ENST00000398080 IFT172Q9UG01 1749 aa15.61■□□□□ 0.09
SCML1-204ENST00000398080 IDI1Q13907 227 aa15.6■□□□□ 0.09
SCML1-204ENST00000398080 STAC3Q96MF2 364 aa15.6■□□□□ 0.09
SCML1-204ENST00000398080 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
SCML1-204ENST00000398080 KIAA1210Q9ULL0 1709 aa15.6■□□□□ 0.09
SCML1-204ENST00000398080 GAS2L3Q86XJ1 694 aa15.6■□□□□ 0.09
SCML1-204ENST00000398080 PRAM1Q96QH2 718 aa15.6■□□□□ 0.09
SCML1-204ENST00000398080 EVC2Q86UK5 1308 aa15.6■□□□□ 0.09
SCML1-204ENST00000398080 ZBTB40Q9NUA8 1239 aa15.59■□□□□ 0.09
SCML1-204ENST00000398080 KIDINS220Q9ULH0 1771 aa15.59■□□□□ 0.09
SCML1-204ENST00000398080 NCKAP5LQ9HCH0 1330 aa15.59■□□□□ 0.09
SCML1-204ENST00000398080 GOLGA6L3A6NEY3 463 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms