RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ATF7IPQ6VMQ6 1270 aa13.8□□□□□ -0.2
CSGALNACT1-202ENST00000397998 ARHGEF12Q9NZN5 1544 aa13.8□□□□□ -0.2
CSGALNACT1-202ENST00000397998 RLBP1P12271 317 aa13.79□□□□□ -0.2
CSGALNACT1-202ENST00000397998 ESPNB1AK53 854 aa13.79□□□□□ -0.2
CSGALNACT1-202ENST00000397998 XRCC6P12956 609 aaKnown RBP eCLIP13.79□□□□□ -0.2
CSGALNACT1-202ENST00000397998 MCTP1Q6DN14 999 aa13.79□□□□□ -0.2
CSGALNACT1-202ENST00000397998 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
CSGALNACT1-202ENST00000397998 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
CSGALNACT1-202ENST00000397998 NASPP49321 788 aaPredicted RBP13.78□□□□□ -0.2
CSGALNACT1-202ENST00000397998 HMOX1P09601 288 aa13.78□□□□□ -0.2
CSGALNACT1-202ENST00000397998 NSD3Q9BZ95 1437 aa13.78□□□□□ -0.2
CSGALNACT1-202ENST00000397998 ST18O60284 1047 aa13.77□□□□□ -0.2
CSGALNACT1-202ENST00000397998 TMEM57Q8N5G2 664 aa13.77□□□□□ -0.2
CSGALNACT1-202ENST00000397998 COL17A1Q9UMD9 1497 aaPredicted RBP13.77□□□□□ -0.2
CSGALNACT1-202ENST00000397998 SLC4A10Q6U841 1118 aa13.77□□□□□ -0.21
CSGALNACT1-202ENST00000397998 KDM5CP41229 1560 aa13.77□□□□□ -0.21
CSGALNACT1-202ENST00000397998 SSH1Q8WYL5 1049 aa13.77□□□□□ -0.21
CSGALNACT1-202ENST00000397998 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
CSGALNACT1-202ENST00000397998 ADGRF5Q8IZF2 1346 aa13.76□□□□□ -0.21
CSGALNACT1-202ENST00000397998 BCORL1Q5H9F3 1711 aa13.76□□□□□ -0.21
CSGALNACT1-202ENST00000397998 FAM135AQ9P2D6 1515 aa13.76□□□□□ -0.21
CSGALNACT1-202ENST00000397998 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
CSGALNACT1-202ENST00000397998 VGFO15240 615 aaPredicted RBP13.75□□□□□ -0.21
CSGALNACT1-202ENST00000397998 MCCP23508 829 aa13.75□□□□□ -0.21
CSGALNACT1-202ENST00000397998 FAM13BQ9NYF5 915 aa13.75□□□□□ -0.21
CSGALNACT1-202ENST00000397998 ATP10BO94823 1461 aa13.75□□□□□ -0.21
CSGALNACT1-202ENST00000397998 ZMYM4Q5VZL5 1548 aa13.75□□□□□ -0.21
CSGALNACT1-202ENST00000397998 RRAGDQ9NQL2 400 aaPredicted RBP13.75□□□□□ -0.21
CSGALNACT1-202ENST00000397998 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
CSGALNACT1-202ENST00000397998 ABCA5Q8WWZ7 1642 aa13.74□□□□□ -0.21
CSGALNACT1-202ENST00000397998 TRIM27P14373 513 aa13.74□□□□□ -0.21
CSGALNACT1-202ENST00000397998 CHD1LQ86WJ1 897 aa13.74□□□□□ -0.21
CSGALNACT1-202ENST00000397998 DISP1Q96F81 1524 aa13.74□□□□□ -0.21
CSGALNACT1-202ENST00000397998 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
CSGALNACT1-202ENST00000397998 SCAF11Q99590 1463 aaKnown RBP13.74□□□□□ -0.21
CSGALNACT1-202ENST00000397998 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
CSGALNACT1-202ENST00000397998 UBE2Q2Q8WVN8 375 aa13.73□□□□□ -0.21
CSGALNACT1-202ENST00000397998 KIAA0556O60303 1618 aa13.73□□□□□ -0.21
CSGALNACT1-202ENST00000397998 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
CSGALNACT1-202ENST00000397998 CARD14Q9BXL6 1004 aa13.73□□□□□ -0.21
CSGALNACT1-202ENST00000397998 A2MP01023 1474 aa13.73□□□□□ -0.21
CSGALNACT1-202ENST00000397998 TMPOP42166 694 aaKnown RBP13.73□□□□□ -0.21
CSGALNACT1-202ENST00000397998 CDC45O75419 566 aa13.72□□□□□ -0.21
CSGALNACT1-202ENST00000397998 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
CSGALNACT1-202ENST00000397998 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
CSGALNACT1-202ENST00000397998 TNPO1Q92973 898 aaKnown RBP13.72□□□□□ -0.21
CSGALNACT1-202ENST00000397998 ASXL1Q8IXJ9 1541 aa13.72□□□□□ -0.21
CSGALNACT1-202ENST00000397998 R3HCC1Q9Y3T6 440 aaKnown RBP13.72□□□□□ -0.21
CSGALNACT1-202ENST00000397998 ITSN2Q9NZM3 1697 aa13.71□□□□□ -0.21
CSGALNACT1-202ENST00000397998 MBD5Q9P267 1494 aa13.71□□□□□ -0.21
CSGALNACT1-202ENST00000397998 K7ELQ4 463 aaPredicted RBP13.71□□□□□ -0.21
CSGALNACT1-202ENST00000397998 NUCB2P80303 420 aa13.71□□□□□ -0.21
CSGALNACT1-202ENST00000397998 RNF214Q8ND24 703 aa13.71□□□□□ -0.22
CSGALNACT1-202ENST00000397998 ADAMTS12P58397 1594 aa13.7□□□□□ -0.22
CSGALNACT1-202ENST00000397998 KIAA2012Q0VF49 1180 aa13.7□□□□□ -0.22
CSGALNACT1-202ENST00000397998 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
CSGALNACT1-202ENST00000397998 HMMRO75330 724 aa13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 API5Q9BZZ5 524 aaKnown RBP13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 SYAP1Q96A49 352 aaPredicted RBP13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 PRPF40AO75400 957 aaKnown RBP13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 PIK3C2GO75747 1445 aa13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 LMOD3Q0VAK6 560 aa13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 RILPL2Q969X0 211 aa13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 THUMPD2Q9BTF0 503 aaKnown RBP13.69□□□□□ -0.22
CSGALNACT1-202ENST00000397998 RTF1Q92541 710 aaKnown RBP13.68□□□□□ -0.22
CSGALNACT1-202ENST00000397998 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
CSGALNACT1-202ENST00000397998 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
CSGALNACT1-202ENST00000397998 MLECQ14165 292 aa13.68□□□□□ -0.22
CSGALNACT1-202ENST00000397998 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.68□□□□□ -0.22
CSGALNACT1-202ENST00000397998 KIAA1211Q6ZU35 1233 aa13.68□□□□□ -0.22
CSGALNACT1-202ENST00000397998 GNAI1P63096 354 aa13.68□□□□□ -0.22
CSGALNACT1-202ENST00000397998 INTS3Q68E01 1043 aaKnown RBP13.68□□□□□ -0.22
CSGALNACT1-202ENST00000397998 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
CSGALNACT1-202ENST00000397998 SSFA2P28290 1259 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 REC8O95072 547 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 PKNOX2Q96KN3 472 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 CLCN1P35523 988 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 KCNJ4P48050 445 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 ZNF521Q96K83 1311 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 INSRP06213 1382 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 NUP160Q12769 1436 aa13.67□□□□□ -0.22
CSGALNACT1-202ENST00000397998 SHANK2Q9UPX8 1470 aa13.66□□□□□ -0.22
CSGALNACT1-202ENST00000397998 RRP9O43818 475 aaKnown RBP13.65□□□□□ -0.22
CSGALNACT1-202ENST00000397998 MAGI2Q86UL8 1455 aa13.65□□□□□ -0.22
CSGALNACT1-202ENST00000397998 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
CSGALNACT1-202ENST00000397998 RABEP1Q15276 862 aa13.64□□□□□ -0.23
CSGALNACT1-202ENST00000397998 SYCP2Q9BX26 1530 aa13.64□□□□□ -0.23
CSGALNACT1-202ENST00000397998 TPM2P07951 284 aa13.64□□□□□ -0.23
CSGALNACT1-202ENST00000397998 CHAF1AQ13111 956 aaPredicted RBP13.64□□□□□ -0.23
CSGALNACT1-202ENST00000397998 MPNDQ8N594 471 aa13.64□□□□□ -0.23
CSGALNACT1-202ENST00000397998 STK31Q9BXU1 1019 aa13.64□□□□□ -0.23
CSGALNACT1-202ENST00000397998 ANO2Q9NQ90 1003 aa13.64□□□□□ -0.23
CSGALNACT1-202ENST00000397998 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms