RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 ORAI2Q96SN7 254 aa13.98□□□□□ -0.17
MCF2L-206ENST00000397021 POGKQ9P215 609 aa13.98□□□□□ -0.17
MCF2L-206ENST00000397021 C1orf167Q5SNV9 1468 aa13.97□□□□□ -0.17
MCF2L-206ENST00000397021 ADGRB1O14514 1584 aa13.96□□□□□ -0.17
MCF2L-206ENST00000397021 SIRT1Q96EB6 747 aa13.96□□□□□ -0.17
MCF2L-206ENST00000397021 HIRIP3Q9BW71 556 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-206ENST00000397021 LAMC1P11047 1609 aa13.94□□□□□ -0.18
MCF2L-206ENST00000397021 ESCO1Q5FWF5 840 aa13.94□□□□□ -0.18
MCF2L-206ENST00000397021 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-206ENST00000397021 KNDC1Q76NI1 1749 aa13.91□□□□□ -0.18
MCF2L-206ENST00000397021 MED1Q15648 1581 aaPredicted RBP13.91□□□□□ -0.18
MCF2L-206ENST00000397021 DLC1Q96QB1 1528 aa13.9□□□□□ -0.18
MCF2L-206ENST00000397021 PHLPP1O60346 1717 aa13.9□□□□□ -0.18
MCF2L-206ENST00000397021 XPCQ01831 940 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-206ENST00000397021 NBPF8Q3BBV2 869 aa13.9□□□□□ -0.18
MCF2L-206ENST00000397021 JCADQ9P266 1359 aa13.9□□□□□ -0.18
MCF2L-206ENST00000397021 CDC42BPGQ6DT37 1551 aa13.9□□□□□ -0.18
MCF2L-206ENST00000397021 AHDC1Q5TGY3 1603 aaPredicted RBP13.9□□□□□ -0.19
MCF2L-206ENST00000397021 TONSLQ96HA7 1378 aa13.89□□□□□ -0.19
MCF2L-206ENST00000397021 FOXO3O43524 673 aa13.89□□□□□ -0.19
MCF2L-206ENST00000397021 PHF23Q9BUL5 403 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-206ENST00000397021 COL16A1Q07092 1604 aaPredicted RBP13.89□□□□□ -0.19
MCF2L-206ENST00000397021 NUTM2BA6NNL0 878 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-206ENST00000397021 NUTM2EB1AL46 878 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-206ENST00000397021 ILDR2Q71H61 639 aa13.88□□□□□ -0.19
MCF2L-206ENST00000397021 NUTM2AQ8IVF1 878 aaPredicted RBP13.88□□□□□ -0.19
MCF2L-206ENST00000397021 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
MCF2L-206ENST00000397021 WASLO00401 505 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-206ENST00000397021 PMFBP1Q8TBY8 1022 aa13.85□□□□□ -0.19
MCF2L-206ENST00000397021 PHF8Q9UPP1 1060 aa13.85□□□□□ -0.19
MCF2L-206ENST00000397021 SOS2Q07890 1332 aaPredicted RBP13.85□□□□□ -0.19
MCF2L-206ENST00000397021 PRR36Q9H6K5 1346 aa13.85□□□□□ -0.19
MCF2L-206ENST00000397021 ROCK2O75116 1388 aaKnown RBP13.84□□□□□ -0.19
MCF2L-206ENST00000397021 RGS17Q9UGC6 210 aaPredicted RBP13.84□□□□□ -0.19
MCF2L-206ENST00000397021 NPHP3Q7Z494 1330 aa13.84□□□□□ -0.19
MCF2L-206ENST00000397021 NHSL1Q5SYE7 1610 aa13.83□□□□□ -0.2
MCF2L-206ENST00000397021 MEX3CQ5U5Q3 659 aaKnown RBP13.83□□□□□ -0.2
MCF2L-206ENST00000397021 CDK19Q9BWU1 502 aa13.83□□□□□ -0.2
MCF2L-206ENST00000397021 SPATA31A6Q5VVP1 1343 aa13.83□□□□□ -0.2
MCF2L-206ENST00000397021 CENPJQ9HC77 1338 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-206ENST00000397021 PNPLA6Q8IY17 1366 aa13.83□□□□□ -0.2
MCF2L-206ENST00000397021 LRP6O75581 1613 aa13.82□□□□□ -0.2
MCF2L-206ENST00000397021 FMN2Q9NZ56 1722 aa13.82□□□□□ -0.2
MCF2L-206ENST00000397021 KRT28Q7Z3Y7 464 aa13.82□□□□□ -0.2
MCF2L-206ENST00000397021 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
MCF2L-206ENST00000397021 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
MCF2L-206ENST00000397021 ARHGEF28Q8N1W1 1705 aaKnown RBP13.81□□□□□ -0.2
MCF2L-206ENST00000397021 PXDNQ92626 1479 aa13.8□□□□□ -0.2
MCF2L-206ENST00000397021 ADGRB2O60241 1585 aa13.8□□□□□ -0.2
MCF2L-206ENST00000397021 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
MCF2L-206ENST00000397021 NUDT16Q96DE0 195 aaKnown RBP13.8□□□□□ -0.2
MCF2L-206ENST00000397021 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
MCF2L-206ENST00000397021 ANKARQ7Z5J8 1434 aa13.8□□□□□ -0.2
MCF2L-206ENST00000397021 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
MCF2L-206ENST00000397021 PSME1Q06323 249 aa13.79□□□□□ -0.2
MCF2L-206ENST00000397021 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
MCF2L-206ENST00000397021 TRPM1Q7Z4N2 1603 aa13.79□□□□□ -0.2
MCF2L-206ENST00000397021 SRPK2P78362 688 aaKnown RBP13.78□□□□□ -0.2
MCF2L-206ENST00000397021 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
MCF2L-206ENST00000397021 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
MCF2L-206ENST00000397021 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
MCF2L-206ENST00000397021 USP32Q8NFA0 1604 aa13.78□□□□□ -0.2
MCF2L-206ENST00000397021 POTEAQ6S8J7 498 aa13.77□□□□□ -0.21
MCF2L-206ENST00000397021 NGDNQ8NEJ9 315 aaKnown RBP13.77□□□□□ -0.21
MCF2L-206ENST00000397021 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
MCF2L-206ENST00000397021 GPRASP1Q5JY77 1395 aa13.76□□□□□ -0.21
MCF2L-206ENST00000397021 SPATA31A3Q5VYP0 1347 aa13.76□□□□□ -0.21
MCF2L-206ENST00000397021 C8orf37Q96NL8 207 aa13.76□□□□□ -0.21
MCF2L-206ENST00000397021 ATP7BP35670 1465 aa13.75□□□□□ -0.21
MCF2L-206ENST00000397021 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
MCF2L-206ENST00000397021 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
MCF2L-206ENST00000397021 CCDC61Q9Y6R9 512 aa13.74□□□□□ -0.21
MCF2L-206ENST00000397021 KIF1AQ12756 1690 aa13.73□□□□□ -0.21
MCF2L-206ENST00000397021 AFF2P51816 1311 aa13.73□□□□□ -0.21
MCF2L-206ENST00000397021 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
MCF2L-206ENST00000397021 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-206ENST00000397021 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
MCF2L-206ENST00000397021 TNS3Q68CZ2 1445 aa13.73□□□□□ -0.21
MCF2L-206ENST00000397021 ACEP12821 1306 aa13.72□□□□□ -0.21
MCF2L-206ENST00000397021 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
MCF2L-206ENST00000397021 NGLY1Q96IV0 654 aa13.72□□□□□ -0.21
MCF2L-206ENST00000397021 SBNO1A3KN83 1393 aa13.71□□□□□ -0.21
MCF2L-206ENST00000397021 HAP1P54257 671 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-206ENST00000397021 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
MCF2L-206ENST00000397021 QRICH2Q9H0J4 1663 aa13.7□□□□□ -0.22
MCF2L-206ENST00000397021 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
MCF2L-206ENST00000397021 ZNF772Q68DY9 489 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-206ENST00000397021 PPIP5K1Q6PFW1 1433 aa13.7□□□□□ -0.22
MCF2L-206ENST00000397021 ST20-MTHFSA0A0A6YYL1 179 aa13.69□□□□□ -0.22
MCF2L-206ENST00000397021 NUTM2GQ5VZR2 741 aa13.69□□□□□ -0.22
MCF2L-206ENST00000397021 TIMELESSQ9UNS1 1208 aa13.69□□□□□ -0.22
MCF2L-206ENST00000397021 ARHGEF10O15013 1369 aa13.68□□□□□ -0.22
MCF2L-206ENST00000397021 USP21Q9UK80 565 aa13.67□□□□□ -0.22
MCF2L-206ENST00000397021 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-206ENST00000397021 COL22A1Q8NFW1 1626 aaPredicted RBP13.67□□□□□ -0.22
MCF2L-206ENST00000397021 SOCS7O14512 581 aa13.66□□□□□ -0.22
MCF2L-206ENST00000397021 QTRT2Q9H974 415 aaKnown RBP13.66□□□□□ -0.22
MCF2L-206ENST00000397021 TESK2Q96S53 571 aa13.65□□□□□ -0.22
MCF2L-206ENST00000397021 USP47Q96K76 1375 aa13.64□□□□□ -0.23
MCF2L-206ENST00000397021 SBNO2Q9Y2G9 1366 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms