RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 RARSP54136 660 aaKnown RBP30.54■■■□□ 2.48
CSNK1E-203ENST00000396832 TMEM132EQ6IEE7 984 aa30.53■■■□□ 2.48
CSNK1E-203ENST00000396832 FSD2A1L4K1 749 aa30.53■■■□□ 2.48
CSNK1E-203ENST00000396832 NUTM2DQ5VT03 806 aaPredicted RBP30.53■■■□□ 2.48
CSNK1E-203ENST00000396832 TBC1D32Q96NH3 1257 aa30.52■■■□□ 2.48
CSNK1E-203ENST00000396832 GZF1Q9H116 711 aaPredicted RBP30.52■■■□□ 2.48
CSNK1E-203ENST00000396832 PANK2Q9BZ23 570 aa30.52■■■□□ 2.48
CSNK1E-203ENST00000396832 PTPRTO14522 1441 aa30.52■■■□□ 2.48
CSNK1E-203ENST00000396832 ZCCHC11Q5TAX3 1644 aaKnown RBP30.51■■■□□ 2.47
CSNK1E-203ENST00000396832 ABCA6Q8N139 1617 aa30.51■■■□□ 2.47
CSNK1E-203ENST00000396832 PKNOX2Q96KN3 472 aa30.51■■■□□ 2.47
CSNK1E-203ENST00000396832 ZFYVE16Q7Z3T8 1539 aa30.5■■■□□ 2.47
CSNK1E-203ENST00000396832 CLCN1P35523 988 aa30.5■■■□□ 2.47
CSNK1E-203ENST00000396832 PDZRN3Q9UPQ7 1066 aa30.5■■■□□ 2.47
CSNK1E-203ENST00000396832 KANK1Q14678 1352 aa30.5■■■□□ 2.47
CSNK1E-203ENST00000396832 CFAP65Q6ZU64 1925 aaKnown RBP30.5■■■□□ 2.47
CSNK1E-203ENST00000396832 MCM4P33991 863 aa30.48■■■□□ 2.47
CSNK1E-203ENST00000396832 MTHFSP49914 203 aa30.48■■■□□ 2.47
CSNK1E-203ENST00000396832 RUNDC1Q96C34 613 aa30.46■■■□□ 2.47
CSNK1E-203ENST00000396832 SAFB2Q14151 953 aaKnown RBP eCLIP30.45■■■□□ 2.46
CSNK1E-203ENST00000396832 TSR2Q969E8 191 aaKnown RBP30.44■■■□□ 2.46
CSNK1E-203ENST00000396832 POLR3AO14802 1390 aaPredicted RBP30.43■■■□□ 2.46
CSNK1E-203ENST00000396832 NINLQ9Y2I6 1382 aa30.42■■■□□ 2.46
CSNK1E-203ENST00000396832 MAP3K4Q9Y6R4 1608 aa30.42■■■□□ 2.46
CSNK1E-203ENST00000396832 HSP90AA1P07900 732 aaKnown RBP30.42■■■□□ 2.46
CSNK1E-203ENST00000396832 PMFBP1Q8TBY8 1022 aa30.42■■■□□ 2.46
CSNK1E-203ENST00000396832 TET3O43151 1660 aa30.41■■■□□ 2.46
CSNK1E-203ENST00000396832 NOS1P29475 1434 aa30.41■■■□□ 2.46
CSNK1E-203ENST00000396832 U2AF1L5P0DN76 240 aaPredicted RBP30.41■■■□□ 2.46
CSNK1E-203ENST00000396832 U2AF1Q01081 240 aaKnown RBP eCLIP30.41■■■□□ 2.46
CSNK1E-203ENST00000396832 HSP90AA2PQ14568 343 aaPredicted RBP30.41■■■□□ 2.46
CSNK1E-203ENST00000396832 OSCARQ8IYS5 282 aa30.41■■■□□ 2.46
CSNK1E-203ENST00000396832 VSIG10Q8N0Z9 540 aa30.4■■■□□ 2.46
CSNK1E-203ENST00000396832 TRAK2O60296 914 aa30.38■■■□□ 2.45
CSNK1E-203ENST00000396832 FTSJ3Q8IY81 847 aaKnown RBP30.38■■■□□ 2.45
CSNK1E-203ENST00000396832 MFAP1P55081 439 aaKnown RBP30.37■■■□□ 2.45
CSNK1E-203ENST00000396832 STAC3Q96MF2 364 aa30.37■■■□□ 2.45
CSNK1E-203ENST00000396832 SHPRHQ149N8 1683 aa30.37■■■□□ 2.45
CSNK1E-203ENST00000396832 MROH2AA6NES4 1674 aa30.37■■■□□ 2.45
CSNK1E-203ENST00000396832 ATP7AQ04656 1500 aa30.35■■■□□ 2.45
CSNK1E-203ENST00000396832 RRP9O43818 475 aaKnown RBP30.35■■■□□ 2.45
CSNK1E-203ENST00000396832 MRE11P49959 708 aa30.35■■■□□ 2.45
CSNK1E-203ENST00000396832 NGEFQ8N5V2 710 aa30.35■■■□□ 2.45
CSNK1E-203ENST00000396832 CHMP5Q9NZZ3 219 aa30.34■■■□□ 2.45
CSNK1E-203ENST00000396832 ZMYND15Q9H091 742 aa30.33■■■□□ 2.45
CSNK1E-203ENST00000396832 DEPDC5O75140 1603 aa30.33■■■□□ 2.45
CSNK1E-203ENST00000396832 U2SURPO15042 1029 aaKnown RBP30.32■■■□□ 2.44
CSNK1E-203ENST00000396832 ZMYM3Q14202 1370 aa30.32■■■□□ 2.44
CSNK1E-203ENST00000396832 FANCAO15360 1455 aa30.32■■■□□ 2.44
CSNK1E-203ENST00000396832 RWDD1Q9H446 243 aaPredicted RBP30.32■■■□□ 2.44
CSNK1E-203ENST00000396832 RTEL1-TNFRSF6BF6WH68 1400 aa30.31■■■□□ 2.44
CSNK1E-203ENST00000396832 KIF1BO60333 1816 aa30.31■■■□□ 2.44
CSNK1E-203ENST00000396832 GGT6Q6P531 493 aa30.31■■■□□ 2.44
CSNK1E-203ENST00000396832 KIAA1210Q9ULL0 1709 aa30.3■■■□□ 2.44
CSNK1E-203ENST00000396832 AAMPQ13685 434 aa30.29■■■□□ 2.44
CSNK1E-203ENST00000396832 MYH16Q9H6N6 1097 aa30.29■■■□□ 2.44
CSNK1E-203ENST00000396832 SMC4Q9NTJ3 1288 aa30.29■■■□□ 2.44
CSNK1E-203ENST00000396832 MVPQ14764 893 aaKnown RBP30.29■■■□□ 2.44
CSNK1E-203ENST00000396832 ITPRIPQ8IWB1 547 aa30.29■■■□□ 2.44
CSNK1E-203ENST00000396832 CFAP53Q96M91 514 aa30.29■■■□□ 2.44
CSNK1E-203ENST00000396832 IQSEC2Q5JU85 1478 aa30.28■■■□□ 2.44
CSNK1E-203ENST00000396832 GRPEL1Q9HAV7 217 aa30.28■■■□□ 2.44
CSNK1E-203ENST00000396832 CABP2Q9NPB3 220 aa30.28■■■□□ 2.44
CSNK1E-203ENST00000396832 MYOM2P54296 1465 aa30.27■■■□□ 2.44
CSNK1E-203ENST00000396832 C22orf23Q9BZE7 217 aa30.26■■■□□ 2.44
CSNK1E-203ENST00000396832 WDR63Q8IWG1 891 aa30.26■■■□□ 2.43
CSNK1E-203ENST00000396832 EXOSC9Q06265 439 aaKnown RBP30.26■■■□□ 2.43
CSNK1E-203ENST00000396832 DZIP1LQ8IYY4 767 aaKnown RBP30.26■■■□□ 2.43
CSNK1E-203ENST00000396832 ADGRL1O94910 1474 aa30.25■■■□□ 2.43
CSNK1E-203ENST00000396832 ESPNB1AK53 854 aa30.25■■■□□ 2.43
CSNK1E-203ENST00000396832 ZKSCAN2Q63HK3 967 aa30.25■■■□□ 2.43
CSNK1E-203ENST00000396832 PHF23Q9BUL5 403 aaPredicted RBP30.23■■■□□ 2.43
CSNK1E-203ENST00000396832 SLC24A1O60721 1099 aa30.23■■■□□ 2.43
CSNK1E-203ENST00000396832 MROH1Q8NDA8 1641 aa30.22■■■□□ 2.43
CSNK1E-203ENST00000396832 TRIM27P14373 513 aa30.21■■■□□ 2.43
CSNK1E-203ENST00000396832 GGNBP2Q9H3C7 697 aa30.21■■■□□ 2.43
CSNK1E-203ENST00000396832 QRICH2Q9H0J4 1663 aa30.21■■■□□ 2.43
CSNK1E-203ENST00000396832 ZNF518AQ6AHZ1 1483 aa30.21■■■□□ 2.43
CSNK1E-203ENST00000396832 ERBB4Q15303 1308 aa30.21■■■□□ 2.43
CSNK1E-203ENST00000396832 VWDEQ8N2E2 1590 aa30.21■■■□□ 2.43
CSNK1E-203ENST00000396832 STK26Q9P289 416 aa30.2■■■□□ 2.43
CSNK1E-203ENST00000396832 PPRC1Q5VV67 1664 aaKnown RBP30.2■■■□□ 2.43
CSNK1E-203ENST00000396832 INO80Q9ULG1 1556 aaPredicted RBP30.2■■■□□ 2.42
CSNK1E-203ENST00000396832 DDX11L8A8MPP1 907 aa30.2■■■□□ 2.42
CSNK1E-203ENST00000396832 SSH1Q8WYL5 1049 aa30.19■■■□□ 2.42
CSNK1E-203ENST00000396832 EFCAB6Q5THR3 1501 aa30.17■■■□□ 2.42
CSNK1E-203ENST00000396832 IFT172Q9UG01 1749 aa30.17■■■□□ 2.42
CSNK1E-203ENST00000396832 ISY1Q9ULR0 285 aaKnown RBP30.16■■■□□ 2.42
CSNK1E-203ENST00000396832 SBNO2Q9Y2G9 1366 aa30.16■■■□□ 2.42
CSNK1E-203ENST00000396832 NPM1P06748 294 aaKnown RBP eCLIP30.15■■■□□ 2.42
CSNK1E-203ENST00000396832 C14orf93Q9H972 538 aaKnown RBP30.15■■■□□ 2.42
CSNK1E-203ENST00000396832 HSCBQ8IWL3 235 aa30.15■■■□□ 2.42
CSNK1E-203ENST00000396832 NOB1Q9ULX3 412 aaKnown RBP30.15■■■□□ 2.42
CSNK1E-203ENST00000396832 TRIM44Q96DX7 344 aaPredicted RBP30.15■■■□□ 2.42
CSNK1E-203ENST00000396832 ZNF692Q9BU19 519 aaPredicted RBP30.15■■■□□ 2.42
CSNK1E-203ENST00000396832 UHRF1BP1LA0JNW5 1464 aa30.14■■■□□ 2.41
CSNK1E-203ENST00000396832 MYO3AQ8NEV4 1616 aa30.12■■■□□ 2.41
CSNK1E-203ENST00000396832 TMEM57Q8N5G2 664 aa30.12■■■□□ 2.41
CSNK1E-203ENST00000396832 LNPKQ9C0E8 428 aa30.11■■■□□ 2.41
CSNK1E-203ENST00000396832 SRPK2P78362 688 aaKnown RBP30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms