RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 IFT172Q9UG01 1749 aa25.36■■□□□ 1.65
TNFSF13-205ENST00000396545 ORAI2Q96SN7 254 aa25.35■■□□□ 1.65
TNFSF13-205ENST00000396545 SOS2Q07890 1332 aaPredicted RBP25.35■■□□□ 1.65
TNFSF13-205ENST00000396545 ANKRD30BQ9BXX2 1392 aa25.34■■□□□ 1.65
TNFSF13-205ENST00000396545 CDC42BPGQ6DT37 1551 aa25.34■■□□□ 1.65
TNFSF13-205ENST00000396545 RXRBP28702 533 aa25.34■■□□□ 1.65
TNFSF13-205ENST00000396545 CDK12Q9NYV4 1490 aaPredicted RBP25.33■■□□□ 1.65
TNFSF13-205ENST00000396545 RGL3Q3MIN7 710 aa25.33■■□□□ 1.65
TNFSF13-205ENST00000396545 TECPR2O15040 1411 aa25.33■■□□□ 1.65
TNFSF13-205ENST00000396545 C8orf37Q96NL8 207 aa25.31■■□□□ 1.64
TNFSF13-205ENST00000396545 PIK3C2GO75747 1445 aa25.3■■□□□ 1.64
TNFSF13-205ENST00000396545 LRPPRCP42704 1394 aaKnown RBP25.29■■□□□ 1.64
TNFSF13-205ENST00000396545 KNDC1Q76NI1 1749 aa25.27■■□□□ 1.64
TNFSF13-205ENST00000396545 ABCC11Q96J66 1382 aa25.27■■□□□ 1.64
TNFSF13-205ENST00000396545 UPF1Q92900 1129 aaKnown RBP eCLIP25.27■■□□□ 1.64
TNFSF13-205ENST00000396545 STK26Q9P289 416 aa25.26■■□□□ 1.63
TNFSF13-205ENST00000396545 COL22A1Q8NFW1 1626 aaPredicted RBP25.25■■□□□ 1.63
TNFSF13-205ENST00000396545 ADAMTS2O95450 1211 aa25.24■■□□□ 1.63
TNFSF13-205ENST00000396545 WAPLQ7Z5K2 1190 aa25.24■■□□□ 1.63
TNFSF13-205ENST00000396545 ESCO1Q5FWF5 840 aa25.23■■□□□ 1.63
TNFSF13-205ENST00000396545 TMEM132EQ6IEE7 984 aa25.23■■□□□ 1.63
TNFSF13-205ENST00000396545 NPHP3Q7Z494 1330 aa25.23■■□□□ 1.63
TNFSF13-205ENST00000396545 PXDNQ92626 1479 aa25.23■■□□□ 1.63
TNFSF13-205ENST00000396545 QTRT2Q9H974 415 aaKnown RBP25.22■■□□□ 1.63
TNFSF13-205ENST00000396545 PLEKHH1Q9ULM0 1364 aa25.22■■□□□ 1.63
TNFSF13-205ENST00000396545 RGS12O14924 1447 aa25.22■■□□□ 1.63
TNFSF13-205ENST00000396545 YTHDC2Q9H6S0 1430 aaKnown RBP25.21■■□□□ 1.63
TNFSF13-205ENST00000396545 RBM6P78332 1123 aaKnown RBP25.21■■□□□ 1.63
TNFSF13-205ENST00000396545 NGLY1Q96IV0 654 aa25.21■■□□□ 1.63
TNFSF13-205ENST00000396545 NRXN1Q9ULB1 1477 aa25.21■■□□□ 1.63
TNFSF13-205ENST00000396545 MYOM2P54296 1465 aa25.2■■□□□ 1.62
TNFSF13-205ENST00000396545 FOXO3O43524 673 aa25.17■■□□□ 1.62
TNFSF13-205ENST00000396545 C14orf93Q9H972 538 aaKnown RBP25.17■■□□□ 1.62
TNFSF13-205ENST00000396545 FMN2Q9NZ56 1722 aa25.17■■□□□ 1.62
TNFSF13-205ENST00000396545 FNBP4Q8N3X1 1017 aaPredicted RBP25.15■■□□□ 1.62
TNFSF13-205ENST00000396545 NUTM2FA1L443 756 aa25.14■■□□□ 1.62
TNFSF13-205ENST00000396545 XPCQ01831 940 aaPredicted RBP25.14■■□□□ 1.62
TNFSF13-205ENST00000396545 SIRT1Q96EB6 747 aa25.14■■□□□ 1.62
TNFSF13-205ENST00000396545 USP21Q9UK80 565 aa25.14■■□□□ 1.61
TNFSF13-205ENST00000396545 KIF1AQ12756 1690 aa25.12■■□□□ 1.61
TNFSF13-205ENST00000396545 ATRNO75882 1429 aa25.1■■□□□ 1.61
TNFSF13-205ENST00000396545 CFAP70Q5T0N1 1121 aa25.1■■□□□ 1.61
TNFSF13-205ENST00000396545 TRPC5Q9UL62 973 aaPredicted RBP25.1■■□□□ 1.61
TNFSF13-205ENST00000396545 MARF1Q9Y4F3 1742 aaKnown RBP25.09■■□□□ 1.61
TNFSF13-205ENST00000396545 BCL9LQ86UU0 1499 aa25.07■■□□□ 1.6
TNFSF13-205ENST00000396545 SPATA31A3Q5VYP0 1347 aa25.05■■□□□ 1.6
TNFSF13-205ENST00000396545 DLC1Q96QB1 1528 aa25.05■■□□□ 1.6
TNFSF13-205ENST00000396545 EP400Q96L91 3159 aa25.04■■□□□ 1.6
TNFSF13-205ENST00000396545 PRAM1Q96QH2 718 aa25.04■■□□□ 1.6
TNFSF13-205ENST00000396545 ADGRB1O14514 1584 aa25.03■■□□□ 1.6
TNFSF13-205ENST00000396545 RGPD8O14715 1765 aaPredicted RBP25.03■■□□□ 1.6
TNFSF13-205ENST00000396545 ATAD2Q6PL18 1390 aa25.01■■□□□ 1.59
TNFSF13-205ENST00000396545 KRT28Q7Z3Y7 464 aa25.01■■□□□ 1.59
TNFSF13-205ENST00000396545 PHF8Q9UPP1 1060 aa25.01■■□□□ 1.59
TNFSF13-205ENST00000396545 ZNF316A6NFI3 1004 aaPredicted RBP25■■□□□ 1.59
TNFSF13-205ENST00000396545 SAFB2Q14151 953 aaKnown RBP eCLIP25■■□□□ 1.59
TNFSF13-205ENST00000396545 ADGRB2O60241 1585 aa24.99■■□□□ 1.59
TNFSF13-205ENST00000396545 TNS3Q68CZ2 1445 aa24.99■■□□□ 1.59
TNFSF13-205ENST00000396545 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.99■■□□□ 1.59
TNFSF13-205ENST00000396545 TIMELESSQ9UNS1 1208 aa24.98■■□□□ 1.59
TNFSF13-205ENST00000396545 USP32Q8NFA0 1604 aa24.98■■□□□ 1.59
TNFSF13-205ENST00000396545 SLIT2O94813 1529 aa24.97■■□□□ 1.59
TNFSF13-205ENST00000396545 ANKARQ7Z5J8 1434 aa24.97■■□□□ 1.59
TNFSF13-205ENST00000396545 POGKQ9P215 609 aa24.96■■□□□ 1.59
TNFSF13-205ENST00000396545 SBNO1A3KN83 1393 aa24.95■■□□□ 1.58
TNFSF13-205ENST00000396545 PSME1Q06323 249 aa24.95■■□□□ 1.58
TNFSF13-205ENST00000396545 GJD4Q96KN9 370 aaPredicted RBP24.95■■□□□ 1.58
TNFSF13-205ENST00000396545 UNC5CLQ8IV45 518 aa24.93■■□□□ 1.58
TNFSF13-205ENST00000396545 SRCAPQ6ZRS2 3230 aa24.93■■□□□ 1.58
TNFSF13-205ENST00000396545 TRAK1Q9UPV9 953 aa24.92■■□□□ 1.58
TNFSF13-205ENST00000396545 GLI3P10071 1580 aa24.91■■□□□ 1.58
TNFSF13-205ENST00000396545 DCAF11Q8TEB1 546 aa24.91■■□□□ 1.58
TNFSF13-205ENST00000396545 ARHGEF10O15013 1369 aa24.91■■□□□ 1.58
TNFSF13-205ENST00000396545 RALGAPBQ86X10 1494 aa24.9■■□□□ 1.58
TNFSF13-205ENST00000396545 ABCA3Q99758 1704 aa24.9■■□□□ 1.58
TNFSF13-205ENST00000396545 STAC3Q96MF2 364 aa24.9■■□□□ 1.58
TNFSF13-205ENST00000396545 KDM2AQ9Y2K7 1162 aa24.9■■□□□ 1.58
TNFSF13-205ENST00000396545 CABLES1Q8TDN4 633 aa24.89■■□□□ 1.58
TNFSF13-205ENST00000396545 HIRIP3Q9BW71 556 aaPredicted RBP24.88■■□□□ 1.57
TNFSF13-205ENST00000396545 PMFBP1Q8TBY8 1022 aa24.88■■□□□ 1.57
TNFSF13-205ENST00000396545 EIF3AQ14152 1382 aaKnown RBP24.87■■□□□ 1.57
TNFSF13-205ENST00000396545 HAP1P54257 671 aaPredicted RBP24.87■■□□□ 1.57
TNFSF13-205ENST00000396545 TULP4Q9NRJ4 1543 aa24.87■■□□□ 1.57
TNFSF13-205ENST00000396545 TRPM3Q9HCF6 1732 aaPredicted RBP24.86■■□□□ 1.57
TNFSF13-205ENST00000396545 PLCH1Q4KWH8 1693 aa24.86■■□□□ 1.57
TNFSF13-205ENST00000396545 MINK1Q8N4C8 1332 aaPredicted RBP24.86■■□□□ 1.57
TNFSF13-205ENST00000396545 PRR36Q9H6K5 1346 aa24.86■■□□□ 1.57
TNFSF13-205ENST00000396545 NWD2Q9ULI1 1742 aa24.85■■□□□ 1.57
TNFSF13-205ENST00000396545 LMOD2Q6P5Q4 547 aa24.84■■□□□ 1.57
TNFSF13-205ENST00000396545 SIN3AQ96ST3 1273 aa24.84■■□□□ 1.57
TNFSF13-205ENST00000396545 WASLO00401 505 aaPredicted RBP24.83■■□□□ 1.57
TNFSF13-205ENST00000396545 PLEKHG5O94827 1062 aa24.82■■□□□ 1.56
TNFSF13-205ENST00000396545 DIEXFQ68CQ4 756 aaKnown RBP24.82■■□□□ 1.56
TNFSF13-205ENST00000396545 ALS2Q96Q42 1657 aa24.81■■□□□ 1.56
TNFSF13-205ENST00000396545 ARHGEF28Q8N1W1 1705 aaKnown RBP24.81■■□□□ 1.56
TNFSF13-205ENST00000396545 VPS72Q15906 364 aa24.81■■□□□ 1.56
TNFSF13-205ENST00000396545 CCDC125Q86Z20 511 aa24.81■■□□□ 1.56
TNFSF13-205ENST00000396545 GPRASP1Q5JY77 1395 aa24.81■■□□□ 1.56
TNFSF13-205ENST00000396545 FAM83GA6ND36 823 aa24.78■■□□□ 1.56
TNFSF13-205ENST00000396545 NEUROD1Q13562 356 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms