RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 RNF20Q5VTR2 975 aa21.55■■□□□ 1.04
PDE1C-206ENST00000396193 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.55■■□□□ 1.04
PDE1C-206ENST00000396193 IFIT2P09913 472 aaKnown RBP21.55■■□□□ 1.04
PDE1C-206ENST00000396193 TOMM22Q9NS69 142 aa21.55■■□□□ 1.04
PDE1C-206ENST00000396193 NEK4P51957 841 aa21.54■■□□□ 1.04
PDE1C-206ENST00000396193 NINLQ9Y2I6 1382 aa21.54■■□□□ 1.04
PDE1C-206ENST00000396193 HMOX1P09601 288 aa21.54■■□□□ 1.04
PDE1C-206ENST00000396193 MNS1Q8NEH6 495 aa21.54■■□□□ 1.04
PDE1C-206ENST00000396193 C9orf78Q9NZ63 289 aaPredicted RBP21.53■■□□□ 1.04
PDE1C-206ENST00000396193 NOM1Q5C9Z4 860 aaKnown RBP21.53■■□□□ 1.04
PDE1C-206ENST00000396193 GCC1Q96CN9 775 aa21.53■■□□□ 1.04
PDE1C-206ENST00000396193 TSPY26PQ9H489 355 aa21.53■■□□□ 1.04
PDE1C-206ENST00000396193 KIAA1107Q9UPP5 1409 aa21.52■■□□□ 1.04
PDE1C-206ENST00000396193 TPD52L1Q16890 204 aaPredicted RBP21.52■■□□□ 1.04
PDE1C-206ENST00000396193 CCDC9Q9Y3X0 531 aaKnown RBP21.52■■□□□ 1.04
PDE1C-206ENST00000396193 NECTIN2Q92692 538 aa21.52■■□□□ 1.04
PDE1C-206ENST00000396193 UQCRHLA0A096LP55 91 aa21.52■■□□□ 1.04
PDE1C-206ENST00000396193 UQCRHP07919 91 aa21.52■■□□□ 1.04
PDE1C-206ENST00000396193 EIF2S2P20042 333 aaKnown RBP21.52■■□□□ 1.04
PDE1C-206ENST00000396193 TPM1P09493 284 aa21.51■■□□□ 1.03
PDE1C-206ENST00000396193 MCM2P49736 904 aa21.51■■□□□ 1.03
PDE1C-206ENST00000396193 CIZ1Q9ULV3 898 aaPredicted RBP21.51■■□□□ 1.03
PDE1C-206ENST00000396193 TSR1Q2NL82 804 aaKnown RBP21.51■■□□□ 1.03
PDE1C-206ENST00000396193 K7ELQ4 463 aaPredicted RBP21.5■■□□□ 1.03
PDE1C-206ENST00000396193 PES1O00541 588 aaKnown RBP21.5■■□□□ 1.03
PDE1C-206ENST00000396193 TEFQ10587 303 aa21.5■■□□□ 1.03
PDE1C-206ENST00000396193 CPLX2Q6PUV4 134 aaKnown RBP21.5■■□□□ 1.03
PDE1C-206ENST00000396193 CCDC70Q6NSX1 233 aa21.5■■□□□ 1.03
PDE1C-206ENST00000396193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 LETM1O95202 739 aaPredicted RBP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 CCDC73Q6ZRK6 1079 aa21.49■■□□□ 1.03
PDE1C-206ENST00000396193 TIAM1Q13009 1591 aa21.49■■□□□ 1.03
PDE1C-206ENST00000396193 C11orf95C9JLR9 678 aaPredicted RBP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 ZSCAN30Q86W11 494 aa21.49■■□□□ 1.03
PDE1C-206ENST00000396193 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 CWC22Q9HCG8 908 aaKnown RBP21.48■■□□□ 1.03
PDE1C-206ENST00000396193 HSP90AB4PQ58FF6 505 aa21.48■■□□□ 1.03
PDE1C-206ENST00000396193 MVPQ14764 893 aaKnown RBP21.48■■□□□ 1.03
PDE1C-206ENST00000396193 NOB1Q9ULX3 412 aaKnown RBP21.48■■□□□ 1.03
PDE1C-206ENST00000396193 SKAP1Q86WV1 359 aa21.47■■□□□ 1.03
PDE1C-206ENST00000396193 TSR2Q969E8 191 aaKnown RBP21.47■■□□□ 1.03
PDE1C-206ENST00000396193 CFAP70Q5T0N1 1121 aa21.47■■□□□ 1.03
PDE1C-206ENST00000396193 ERC2O15083 957 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 CLSTN1O94985 981 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 WDR63Q8IWG1 891 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 C1orf115Q9H7X2 142 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 CWC15Q9P013 229 aaKnown RBP21.46■■□□□ 1.03
PDE1C-206ENST00000396193 TSPYL4Q9UJ04 414 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 CPLX1O14810 134 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 NEXNQ0ZGT2 675 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 SLFN5Q08AF3 891 aa21.45■■□□□ 1.03
PDE1C-206ENST00000396193 TRIM5Q9C035 493 aa21.45■■□□□ 1.02
PDE1C-206ENST00000396193 EID1Q9Y6B2 187 aa21.45■■□□□ 1.02
PDE1C-206ENST00000396193 G3BP1Q13283 466 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDE1C-206ENST00000396193 HSP90B2PQ58FF3 399 aa21.44■■□□□ 1.02
PDE1C-206ENST00000396193 ATF7IPQ6VMQ6 1270 aa21.44■■□□□ 1.02
PDE1C-206ENST00000396193 CABP2Q9NPB3 220 aa21.44■■□□□ 1.02
PDE1C-206ENST00000396193 CT47B1P0C2W7 299 aaPredicted RBP21.44■■□□□ 1.02
PDE1C-206ENST00000396193 NAIPQ13075 1403 aa21.44■■□□□ 1.02
PDE1C-206ENST00000396193 BCL11BQ9C0K0 894 aaPredicted RBP21.44■■□□□ 1.02
PDE1C-206ENST00000396193 LRRFIP1Q32MZ4 808 aaKnown RBP21.43■■□□□ 1.02
PDE1C-206ENST00000396193 FBXW7Q969H0 707 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 CCDC27Q2M243 656 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 ACBD3Q9H3P7 528 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 TMEM132EQ6IEE7 984 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 C20orf194Q5TEA3 1177 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 PDCL3Q9H2J4 239 aa21.42■■□□□ 1.02
PDE1C-206ENST00000396193 C1orf141Q5JVX7 400 aa21.42■■□□□ 1.02
PDE1C-206ENST00000396193 TRIM29Q14134 588 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 AKAP17AQ02040 695 aaKnown RBP21.41■■□□□ 1.02
PDE1C-206ENST00000396193 FIBPO43427 364 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 SYNE3Q6ZMZ3 975 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 CHD1LQ86WJ1 897 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 IPO7O95373 1038 aaKnown RBP21.4■■□□□ 1.02
PDE1C-206ENST00000396193 UBTFL1P0CB47 393 aaPredicted RBP21.4■■□□□ 1.02
PDE1C-206ENST00000396193 PRKAR2BP31323 418 aa21.4■■□□□ 1.02
PDE1C-206ENST00000396193 TWISTNBQ3B726 338 aaPredicted RBP21.4■■□□□ 1.02
PDE1C-206ENST00000396193 GNAI3P08754 354 aa21.39■■□□□ 1.01
PDE1C-206ENST00000396193 SDF4Q9BRK5 362 aa21.39■■□□□ 1.01
PDE1C-206ENST00000396193 NAT10Q9H0A0 1025 aaKnown RBP21.39■■□□□ 1.01
PDE1C-206ENST00000396193 HOOK1Q9UJC3 728 aaKnown RBP21.38■■□□□ 1.01
PDE1C-206ENST00000396193 ERBINQ96RT1 1412 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 SLC12A5Q9H2X9 1139 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 EHBP1L1Q8N3D4 1523 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 MPNDQ8N594 471 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 CNTROBQ8N137 903 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 EFCAB5A4FU69 1503 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 FOSBP53539 338 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 PDCP20941 246 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 PSMA5P28066 241 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 DDX58O95786 925 aaKnown RBP21.37■■□□□ 1.01
PDE1C-206ENST00000396193 ZMYND15Q9H091 742 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 ANKRD20A12PQ8NF67 263 aa21.36■■□□□ 1.01
PDE1C-206ENST00000396193 CCDC112Q8NEF3 446 aa21.36■■□□□ 1.01
PDE1C-206ENST00000396193 WWC1Q8IX03 1113 aa21.36■■□□□ 1.01
PDE1C-206ENST00000396193 SPC24Q8NBT2 197 aa21.36■■□□□ 1.01
PDE1C-206ENST00000396193 SURF6O75683 361 aaKnown RBP21.35■■□□□ 1.01
PDE1C-206ENST00000396193 WDR33Q9C0J8 1336 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms