RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 RNF20Q5VTR2 975 aa21.55■■□□□ 1.04
PDE1C-206ENST00000396193 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.55■■□□□ 1.04
PDE1C-206ENST00000396193 IFIT2P09913 472 aaKnown RBP21.55■■□□□ 1.04
PDE1C-206ENST00000396193 TOMM22Q9NS69 142 aa21.55■■□□□ 1.04
PDE1C-206ENST00000396193 NEK4P51957 841 aa21.54■■□□□ 1.04
PDE1C-206ENST00000396193 NINLQ9Y2I6 1382 aa21.54■■□□□ 1.04
PDE1C-206ENST00000396193 HMOX1P09601 288 aa21.54■■□□□ 1.04
PDE1C-206ENST00000396193 MNS1Q8NEH6 495 aa21.54■■□□□ 1.04
PDE1C-206ENST00000396193 C9orf78Q9NZ63 289 aaPredicted RBP21.53■■□□□ 1.04
PDE1C-206ENST00000396193 NOM1Q5C9Z4 860 aaKnown RBP21.53■■□□□ 1.04
PDE1C-206ENST00000396193 GCC1Q96CN9 775 aa21.53■■□□□ 1.04
PDE1C-206ENST00000396193 TSPY26PQ9H489 355 aa21.53■■□□□ 1.04
PDE1C-206ENST00000396193 KIAA1107Q9UPP5 1409 aa21.52■■□□□ 1.04
PDE1C-206ENST00000396193 TPD52L1Q16890 204 aaPredicted RBP21.52■■□□□ 1.04
PDE1C-206ENST00000396193 CCDC9Q9Y3X0 531 aaKnown RBP21.52■■□□□ 1.04
PDE1C-206ENST00000396193 NECTIN2Q92692 538 aa21.52■■□□□ 1.04
PDE1C-206ENST00000396193 UQCRHLA0A096LP55 91 aa21.52■■□□□ 1.04
PDE1C-206ENST00000396193 UQCRHP07919 91 aa21.52■■□□□ 1.04
PDE1C-206ENST00000396193 EIF2S2P20042 333 aaKnown RBP21.52■■□□□ 1.04
PDE1C-206ENST00000396193 TPM1P09493 284 aa21.51■■□□□ 1.03
PDE1C-206ENST00000396193 MCM2P49736 904 aa21.51■■□□□ 1.03
PDE1C-206ENST00000396193 CIZ1Q9ULV3 898 aaPredicted RBP21.51■■□□□ 1.03
PDE1C-206ENST00000396193 TSR1Q2NL82 804 aaKnown RBP21.51■■□□□ 1.03
PDE1C-206ENST00000396193 K7ELQ4 463 aaPredicted RBP21.5■■□□□ 1.03
PDE1C-206ENST00000396193 PES1O00541 588 aaKnown RBP21.5■■□□□ 1.03
PDE1C-206ENST00000396193 TEFQ10587 303 aa21.5■■□□□ 1.03
PDE1C-206ENST00000396193 CPLX2Q6PUV4 134 aaKnown RBP21.5■■□□□ 1.03
PDE1C-206ENST00000396193 CCDC70Q6NSX1 233 aa21.5■■□□□ 1.03
PDE1C-206ENST00000396193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 LETM1O95202 739 aaPredicted RBP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 CCDC73Q6ZRK6 1079 aa21.49■■□□□ 1.03
PDE1C-206ENST00000396193 TIAM1Q13009 1591 aa21.49■■□□□ 1.03
PDE1C-206ENST00000396193 C11orf95C9JLR9 678 aaPredicted RBP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 ZSCAN30Q86W11 494 aa21.49■■□□□ 1.03
PDE1C-206ENST00000396193 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.49■■□□□ 1.03
PDE1C-206ENST00000396193 CWC22Q9HCG8 908 aaKnown RBP21.48■■□□□ 1.03
PDE1C-206ENST00000396193 HSP90AB4PQ58FF6 505 aa21.48■■□□□ 1.03
PDE1C-206ENST00000396193 MVPQ14764 893 aaKnown RBP21.48■■□□□ 1.03
PDE1C-206ENST00000396193 NOB1Q9ULX3 412 aaKnown RBP21.48■■□□□ 1.03
PDE1C-206ENST00000396193 SKAP1Q86WV1 359 aa21.47■■□□□ 1.03
PDE1C-206ENST00000396193 TSR2Q969E8 191 aaKnown RBP21.47■■□□□ 1.03
PDE1C-206ENST00000396193 CFAP70Q5T0N1 1121 aa21.47■■□□□ 1.03
PDE1C-206ENST00000396193 ERC2O15083 957 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 CLSTN1O94985 981 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 WDR63Q8IWG1 891 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 C1orf115Q9H7X2 142 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 CWC15Q9P013 229 aaKnown RBP21.46■■□□□ 1.03
PDE1C-206ENST00000396193 TSPYL4Q9UJ04 414 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 CPLX1O14810 134 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 NEXNQ0ZGT2 675 aa21.46■■□□□ 1.03
PDE1C-206ENST00000396193 SLFN5Q08AF3 891 aa21.45■■□□□ 1.03
PDE1C-206ENST00000396193 TRIM5Q9C035 493 aa21.45■■□□□ 1.02
PDE1C-206ENST00000396193 EID1Q9Y6B2 187 aa21.45■■□□□ 1.02
PDE1C-206ENST00000396193 G3BP1Q13283 466 aaKnown RBP eCLIP21.44■■□□□ 1.02
PDE1C-206ENST00000396193 HSP90B2PQ58FF3 399 aa21.44■■□□□ 1.02
PDE1C-206ENST00000396193 ATF7IPQ6VMQ6 1270 aa21.44■■□□□ 1.02
PDE1C-206ENST00000396193 CABP2Q9NPB3 220 aa21.44■■□□□ 1.02
PDE1C-206ENST00000396193 CT47B1P0C2W7 299 aaPredicted RBP21.44■■□□□ 1.02
PDE1C-206ENST00000396193 NAIPQ13075 1403 aa21.44■■□□□ 1.02
PDE1C-206ENST00000396193 BCL11BQ9C0K0 894 aaPredicted RBP21.44■■□□□ 1.02
PDE1C-206ENST00000396193 LRRFIP1Q32MZ4 808 aaKnown RBP21.43■■□□□ 1.02
PDE1C-206ENST00000396193 FBXW7Q969H0 707 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 CCDC27Q2M243 656 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 ACBD3Q9H3P7 528 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 TMEM132EQ6IEE7 984 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 C20orf194Q5TEA3 1177 aa21.43■■□□□ 1.02
PDE1C-206ENST00000396193 PDCL3Q9H2J4 239 aa21.42■■□□□ 1.02
PDE1C-206ENST00000396193 C1orf141Q5JVX7 400 aa21.42■■□□□ 1.02
PDE1C-206ENST00000396193 TRIM29Q14134 588 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 AKAP17AQ02040 695 aaKnown RBP21.41■■□□□ 1.02
PDE1C-206ENST00000396193 FIBPO43427 364 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 SYNE3Q6ZMZ3 975 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 CHD1LQ86WJ1 897 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 SCAPERQ9BY12 1400 aa21.41■■□□□ 1.02
PDE1C-206ENST00000396193 IPO7O95373 1038 aaKnown RBP21.4■■□□□ 1.02
PDE1C-206ENST00000396193 UBTFL1P0CB47 393 aaPredicted RBP21.4■■□□□ 1.02
PDE1C-206ENST00000396193 PRKAR2BP31323 418 aa21.4■■□□□ 1.02
PDE1C-206ENST00000396193 TWISTNBQ3B726 338 aaPredicted RBP21.4■■□□□ 1.02
PDE1C-206ENST00000396193 GNAI3P08754 354 aa21.39■■□□□ 1.01
PDE1C-206ENST00000396193 SDF4Q9BRK5 362 aa21.39■■□□□ 1.01
PDE1C-206ENST00000396193 NAT10Q9H0A0 1025 aaKnown RBP21.39■■□□□ 1.01
PDE1C-206ENST00000396193 HOOK1Q9UJC3 728 aaKnown RBP21.38■■□□□ 1.01
PDE1C-206ENST00000396193 ERBINQ96RT1 1412 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 SLC12A5Q9H2X9 1139 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 EHBP1L1Q8N3D4 1523 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 MPNDQ8N594 471 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 CNTROBQ8N137 903 aa21.38■■□□□ 1.01
PDE1C-206ENST00000396193 EFCAB5A4FU69 1503 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 FOSBP53539 338 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 PDCP20941 246 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 PSMA5P28066 241 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 DDX58O95786 925 aaKnown RBP21.37■■□□□ 1.01
PDE1C-206ENST00000396193 ZMYND15Q9H091 742 aa21.37■■□□□ 1.01
PDE1C-206ENST00000396193 ANKRD20A12PQ8NF67 263 aa21.36■■□□□ 1.01
PDE1C-206ENST00000396193 CCDC112Q8NEF3 446 aa21.36■■□□□ 1.01
PDE1C-206ENST00000396193 WWC1Q8IX03 1113 aa21.36■■□□□ 1.01
PDE1C-206ENST00000396193 SPC24Q8NBT2 197 aa21.36■■□□□ 1.01
PDE1C-206ENST00000396193 SURF6O75683 361 aaKnown RBP21.35■■□□□ 1.01
PDE1C-206ENST00000396193 WDR33Q9C0J8 1336 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms