RNA–Protein interactions for RNA: ENST00000396189.2

PDE1C-204, Transcript of phosphodiesterase 1C, humanhuman

TSL 5

Gene PDE1C, Length 605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-204ENST00000396189 CFAP70Q5T0N1 1121 aa28.16■■■□□ 2.1
PDE1C-204ENST00000396189 C14orf93Q9H972 538 aaKnown RBP28.16■■■□□ 2.1
PDE1C-204ENST00000396189 LRP6O75581 1613 aa28.14■■■□□ 2.1
PDE1C-204ENST00000396189 ORAI2Q96SN7 254 aa28.14■■■□□ 2.1
PDE1C-204ENST00000396189 KDM2AQ9Y2K7 1162 aa28.14■■■□□ 2.1
PDE1C-204ENST00000396189 DHX57Q6P158 1386 aaKnown RBP28.13■■■□□ 2.09
PDE1C-204ENST00000396189 NUTM2BA6NNL0 878 aaPredicted RBP28.13■■■□□ 2.09
PDE1C-204ENST00000396189 NUTM2EB1AL46 878 aaPredicted RBP28.13■■■□□ 2.09
PDE1C-204ENST00000396189 NUTM2AQ8IVF1 878 aaPredicted RBP28.13■■■□□ 2.09
PDE1C-204ENST00000396189 LRRC59Q96AG4 307 aaKnown RBP28.13■■■□□ 2.09
PDE1C-204ENST00000396189 PLEKHH1Q9ULM0 1364 aa28.12■■■□□ 2.09
PDE1C-204ENST00000396189 DCAF11Q8TEB1 546 aa28.12■■■□□ 2.09
PDE1C-204ENST00000396189 NUTM2FA1L443 756 aa28.09■■■□□ 2.09
PDE1C-204ENST00000396189 POTEAQ6S8J7 498 aa28.09■■■□□ 2.09
PDE1C-204ENST00000396189 ESCO1Q5FWF5 840 aa28.08■■■□□ 2.09
PDE1C-204ENST00000396189 FMN2Q9NZ56 1722 aa28.06■■■□□ 2.08
PDE1C-204ENST00000396189 PNPLA6Q8IY17 1366 aa28.04■■■□□ 2.08
PDE1C-204ENST00000396189 SAFB2Q14151 953 aaKnown RBP eCLIP28.04■■■□□ 2.08
PDE1C-204ENST00000396189 SIRT1Q96EB6 747 aa28.03■■■□□ 2.08
PDE1C-204ENST00000396189 PRAM1Q96QH2 718 aa28.02■■■□□ 2.08
PDE1C-204ENST00000396189 POGKQ9P215 609 aa28.02■■■□□ 2.08
PDE1C-204ENST00000396189 SOS2Q07890 1332 aaPredicted RBP28.01■■■□□ 2.07
PDE1C-204ENST00000396189 RGPD8O14715 1765 aaPredicted RBP28.01■■■□□ 2.07
PDE1C-204ENST00000396189 NPHP3Q7Z494 1330 aa28■■■□□ 2.07
PDE1C-204ENST00000396189 ADGRB1O14514 1584 aa28■■■□□ 2.07
PDE1C-204ENST00000396189 STAC3Q96MF2 364 aa28■■■□□ 2.07
PDE1C-204ENST00000396189 DLC1Q96QB1 1528 aa27.99■■■□□ 2.07
PDE1C-204ENST00000396189 ZNF772Q68DY9 489 aaPredicted RBP27.98■■■□□ 2.07
PDE1C-204ENST00000396189 TRAK1Q9UPV9 953 aa27.98■■■□□ 2.07
PDE1C-204ENST00000396189 FOXO3O43524 673 aa27.97■■■□□ 2.07
PDE1C-204ENST00000396189 XPCQ01831 940 aaPredicted RBP27.96■■■□□ 2.07
PDE1C-204ENST00000396189 KIF1AQ12756 1690 aa27.96■■■□□ 2.07
PDE1C-204ENST00000396189 C8orf37Q96NL8 207 aa27.94■■■□□ 2.06
PDE1C-204ENST00000396189 PXDNQ92626 1479 aa27.93■■■□□ 2.06
PDE1C-204ENST00000396189 AFF2P51816 1311 aa27.92■■■□□ 2.06
PDE1C-204ENST00000396189 ADAMTS2O95450 1211 aa27.92■■■□□ 2.06
PDE1C-204ENST00000396189 COL22A1Q8NFW1 1626 aaPredicted RBP27.89■■■□□ 2.06
PDE1C-204ENST00000396189 HIRIP3Q9BW71 556 aaPredicted RBP27.89■■■□□ 2.06
PDE1C-204ENST00000396189 MINK1Q8N4C8 1332 aaPredicted RBP27.89■■■□□ 2.05
PDE1C-204ENST00000396189 ADGRB2O60241 1585 aa27.88■■■□□ 2.05
PDE1C-204ENST00000396189 ARHGEF28Q8N1W1 1705 aaKnown RBP27.88■■■□□ 2.05
PDE1C-204ENST00000396189 PHF8Q9UPP1 1060 aa27.87■■■□□ 2.05
PDE1C-204ENST00000396189 NGLY1Q96IV0 654 aa27.86■■■□□ 2.05
PDE1C-204ENST00000396189 KIAA1210Q9ULL0 1709 aa27.85■■■□□ 2.05
PDE1C-204ENST00000396189 USP32Q8NFA0 1604 aa27.84■■■□□ 2.05
PDE1C-204ENST00000396189 KRT28Q7Z3Y7 464 aa27.83■■■□□ 2.05
PDE1C-204ENST00000396189 RXRBP28702 533 aa27.82■■■□□ 2.04
PDE1C-204ENST00000396189 ANKARQ7Z5J8 1434 aa27.82■■■□□ 2.04
PDE1C-204ENST00000396189 MARF1Q9Y4F3 1742 aaKnown RBP27.81■■■□□ 2.04
PDE1C-204ENST00000396189 EIF3AQ14152 1382 aaKnown RBP27.8■■■□□ 2.04
PDE1C-204ENST00000396189 PSME1Q06323 249 aa27.79■■■□□ 2.04
PDE1C-204ENST00000396189 PMFBP1Q8TBY8 1022 aa27.79■■■□□ 2.04
PDE1C-204ENST00000396189 SPATA31A3Q5VYP0 1347 aa27.78■■■□□ 2.04
PDE1C-204ENST00000396189 TULP4Q9NRJ4 1543 aa27.77■■■□□ 2.04
PDE1C-204ENST00000396189 QTRT2Q9H974 415 aaKnown RBP27.77■■■□□ 2.04
PDE1C-204ENST00000396189 WASLO00401 505 aaPredicted RBP27.76■■■□□ 2.03
PDE1C-204ENST00000396189 NEUROD1Q13562 356 aa27.76■■■□□ 2.03
PDE1C-204ENST00000396189 SIN3AQ96ST3 1273 aa27.76■■■□□ 2.03
PDE1C-204ENST00000396189 LMOD2Q6P5Q4 547 aa27.75■■■□□ 2.03
PDE1C-204ENST00000396189 TNS3Q68CZ2 1445 aa27.75■■■□□ 2.03
PDE1C-204ENST00000396189 PLEKHG5O94827 1062 aa27.74■■■□□ 2.03
PDE1C-204ENST00000396189 NBPF1Q3BBV0 1214 aa27.74■■■□□ 2.03
PDE1C-204ENST00000396189 USP21Q9UK80 565 aa27.74■■■□□ 2.03
PDE1C-204ENST00000396189 ITSN1Q15811 1721 aa27.73■■■□□ 2.03
PDE1C-204ENST00000396189 L3MBTL2Q969R5 705 aa27.73■■■□□ 2.03
PDE1C-204ENST00000396189 HAP1P54257 671 aaPredicted RBP27.72■■■□□ 2.03
PDE1C-204ENST00000396189 PRR36Q9H6K5 1346 aa27.71■■■□□ 2.03
PDE1C-204ENST00000396189 RBM6P78332 1123 aaKnown RBP27.71■■■□□ 2.03
PDE1C-204ENST00000396189 SBNO1A3KN83 1393 aa27.7■■■□□ 2.02
PDE1C-204ENST00000396189 CDK12Q9NYV4 1490 aaPredicted RBP27.7■■■□□ 2.02
PDE1C-204ENST00000396189 GPRASP1Q5JY77 1395 aa27.69■■■□□ 2.02
PDE1C-204ENST00000396189 FNBP4Q8N3X1 1017 aaPredicted RBP27.67■■■□□ 2.02
PDE1C-204ENST00000396189 NGDNQ8NEJ9 315 aaKnown RBP27.67■■■□□ 2.02
PDE1C-204ENST00000396189 TRPC5Q9UL62 973 aaPredicted RBP27.67■■■□□ 2.02
PDE1C-204ENST00000396189 ARHGEF10O15013 1369 aa27.67■■■□□ 2.02
PDE1C-204ENST00000396189 TRPM3Q9HCF6 1732 aaPredicted RBP27.67■■■□□ 2.02
PDE1C-204ENST00000396189 ABCA3Q99758 1704 aa27.65■■■□□ 2.02
PDE1C-204ENST00000396189 CABLES1Q8TDN4 633 aa27.65■■■□□ 2.02
PDE1C-204ENST00000396189 CDK19Q9BWU1 502 aa27.65■■■□□ 2.02
PDE1C-204ENST00000396189 ATP7BP35670 1465 aa27.64■■■□□ 2.02
PDE1C-204ENST00000396189 NUDT16Q96DE0 195 aaKnown RBP27.64■■■□□ 2.02
PDE1C-204ENST00000396189 RGS12O14924 1447 aa27.64■■■□□ 2.02
PDE1C-204ENST00000396189 TRPM1Q7Z4N2 1603 aa27.63■■■□□ 2.01
PDE1C-204ENST00000396189 QRICH2Q9H0J4 1663 aa27.63■■■□□ 2.01
PDE1C-204ENST00000396189 TRIM26Q12899 539 aaPredicted RBP27.63■■■□□ 2.01
PDE1C-204ENST00000396189 CENPJQ9HC77 1338 aaPredicted RBP27.62■■■□□ 2.01
PDE1C-204ENST00000396189 ATRNO75882 1429 aa27.61■■■□□ 2.01
PDE1C-204ENST00000396189 PAK3O75914 559 aaPredicted RBP27.61■■■□□ 2.01
PDE1C-204ENST00000396189 ALS2Q96Q42 1657 aa27.61■■■□□ 2.01
PDE1C-204ENST00000396189 BCL9LQ86UU0 1499 aa27.6■■■□□ 2.01
PDE1C-204ENST00000396189 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.6■■■□□ 2.01
PDE1C-204ENST00000396189 TOPAZ1Q8N9V7 1692 aa27.59■■■□□ 2.01
PDE1C-204ENST00000396189 PLCH1Q4KWH8 1693 aa27.57■■■□□ 2
PDE1C-204ENST00000396189 SRPK2P78362 688 aaKnown RBP27.56■■■□□ 2
PDE1C-204ENST00000396189 ROCK2O75116 1388 aaKnown RBP27.56■■■□□ 2
PDE1C-204ENST00000396189 SLIT2O94813 1529 aa27.55■■■□□ 2
PDE1C-204ENST00000396189 UNC5CLQ8IV45 518 aa27.54■■■□□ 2
PDE1C-204ENST00000396189 UPF1Q92900 1129 aaKnown RBP eCLIP27.54■■■□□ 2
PDE1C-204ENST00000396189 CCDC61Q9Y6R9 512 aa27.54■■■□□ 2
PDE1C-204ENST00000396189 NWD2Q9ULI1 1742 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms