RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 POGKQ9P215 609 aa12.28□□□□□ -0.44
CCR9-203ENST00000395963 TULP4Q9NRJ4 1543 aa12.27□□□□□ -0.45
CCR9-203ENST00000395963 ROBO2Q9HCK4 1378 aa12.27□□□□□ -0.45
CCR9-203ENST00000395963 GTF3C3Q9Y5Q9 886 aa12.27□□□□□ -0.45
CCR9-203ENST00000395963 PRAM1Q96QH2 718 aa12.26□□□□□ -0.45
CCR9-203ENST00000395963 ANKARQ7Z5J8 1434 aa12.26□□□□□ -0.45
CCR9-203ENST00000395963 ADGRL3Q9HAR2 1447 aa12.25□□□□□ -0.45
CCR9-203ENST00000395963 KIF7Q2M1P5 1343 aa12.25□□□□□ -0.45
CCR9-203ENST00000395963 ITSN1Q15811 1721 aa12.25□□□□□ -0.45
CCR9-203ENST00000395963 HSPA2P54652 639 aa12.24□□□□□ -0.45
CCR9-203ENST00000395963 WASHC2AQ641Q2 1341 aa12.24□□□□□ -0.45
CCR9-203ENST00000395963 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.24□□□□□ -0.45
CCR9-203ENST00000395963 STK26Q9P289 416 aa12.24□□□□□ -0.45
CCR9-203ENST00000395963 DISP3Q9P2K9 1392 aa12.23□□□□□ -0.45
CCR9-203ENST00000395963 MYOM1P52179 1685 aa12.23□□□□□ -0.45
CCR9-203ENST00000395963 FMN2Q9NZ56 1722 aa12.23□□□□□ -0.45
CCR9-203ENST00000395963 NALCNQ8IZF0 1738 aa12.22□□□□□ -0.45
CCR9-203ENST00000395963 TOPAZ1Q8N9V7 1692 aa12.22□□□□□ -0.45
CCR9-203ENST00000395963 ATP7BP35670 1465 aa12.22□□□□□ -0.45
CCR9-203ENST00000395963 CENPBP07199 599 aaPredicted RBP12.21□□□□□ -0.45
CCR9-203ENST00000395963 USP32Q8NFA0 1604 aa12.21□□□□□ -0.46
CCR9-203ENST00000395963 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.46
CCR9-203ENST00000395963 WASLO00401 505 aaPredicted RBP12.2□□□□□ -0.46
CCR9-203ENST00000395963 STRCP1A6NGW2 1772 aa12.2□□□□□ -0.46
CCR9-203ENST00000395963 IQSEC2Q5JU85 1478 aa12.2□□□□□ -0.46
CCR9-203ENST00000395963 BRD4O60885 1362 aaPredicted RBP12.2□□□□□ -0.46
CCR9-203ENST00000395963 KTN1Q86UP2 1357 aaKnown RBP12.2□□□□□ -0.46
CCR9-203ENST00000395963 AEBP2Q6ZN18 517 aaPredicted RBP12.19□□□□□ -0.46
CCR9-203ENST00000395963 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
CCR9-203ENST00000395963 LRRC7Q96NW7 1537 aa12.18□□□□□ -0.46
CCR9-203ENST00000395963 WAPLQ7Z5K2 1190 aa12.17□□□□□ -0.46
CCR9-203ENST00000395963 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
CCR9-203ENST00000395963 KIF1AQ12756 1690 aa12.17□□□□□ -0.46
CCR9-203ENST00000395963 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
CCR9-203ENST00000395963 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
CCR9-203ENST00000395963 CDK19Q9BWU1 502 aa12.16□□□□□ -0.46
CCR9-203ENST00000395963 C19orf44Q9H6X5 657 aa12.16□□□□□ -0.46
CCR9-203ENST00000395963 LTBP4Q8N2S1 1624 aa12.16□□□□□ -0.46
CCR9-203ENST00000395963 PROSER2Q86WR7 435 aaPredicted RBP12.15□□□□□ -0.46
CCR9-203ENST00000395963 HIRIP3Q9BW71 556 aaPredicted RBP12.15□□□□□ -0.46
CCR9-203ENST00000395963 NSD2O96028 1365 aa12.15□□□□□ -0.46
CCR9-203ENST00000395963 MSH6P52701 1360 aa12.15□□□□□ -0.46
CCR9-203ENST00000395963 SRPK2P78362 688 aaKnown RBP12.15□□□□□ -0.46
CCR9-203ENST00000395963 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.46
CCR9-203ENST00000395963 AKAP12Q02952 1782 aa12.15□□□□□ -0.46
CCR9-203ENST00000395963 TMEM94Q12767 1356 aa12.15□□□□□ -0.47
CCR9-203ENST00000395963 TERF2IPQ9NYB0 399 aa12.14□□□□□ -0.47
CCR9-203ENST00000395963 XIRP1Q702N8 1843 aaKnown RBP12.14□□□□□ -0.47
CCR9-203ENST00000395963 MON2Q7Z3U7 1717 aa12.14□□□□□ -0.47
CCR9-203ENST00000395963 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
CCR9-203ENST00000395963 CADPS2Q86UW7 1296 aa12.13□□□□□ -0.47
CCR9-203ENST00000395963 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
CCR9-203ENST00000395963 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
CCR9-203ENST00000395963 PPIP5K1Q6PFW1 1433 aa12.13□□□□□ -0.47
CCR9-203ENST00000395963 DIEXFQ68CQ4 756 aaKnown RBP12.12□□□□□ -0.47
CCR9-203ENST00000395963 POLR3AO14802 1390 aaPredicted RBP12.12□□□□□ -0.47
CCR9-203ENST00000395963 HDGFL2Q7Z4V5 671 aaPredicted RBP12.12□□□□□ -0.47
CCR9-203ENST00000395963 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
CCR9-203ENST00000395963 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCR9-203ENST00000395963 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
CCR9-203ENST00000395963 EDC4Q6P2E9 1401 aaKnown RBP12.11□□□□□ -0.47
CCR9-203ENST00000395963 NRKQ7Z2Y5 1582 aa12.1□□□□□ -0.47
CCR9-203ENST00000395963 SENP3Q9H4L4 574 aaPredicted RBP12.1□□□□□ -0.47
CCR9-203ENST00000395963 ZNF335Q9H4Z2 1342 aaPredicted RBP12.1□□□□□ -0.47
CCR9-203ENST00000395963 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
CCR9-203ENST00000395963 CD163L1Q9NR16 1453 aa12.1□□□□□ -0.47
CCR9-203ENST00000395963 USP54Q70EL1 1684 aa12.1□□□□□ -0.47
CCR9-203ENST00000395963 MST1RQ04912 1400 aa12.1□□□□□ -0.47
CCR9-203ENST00000395963 ANKRD26Q9UPS8 1709 aa12.1□□□□□ -0.47
CCR9-203ENST00000395963 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
CCR9-203ENST00000395963 ATF3P18847 181 aa12.09□□□□□ -0.47
CCR9-203ENST00000395963 C1orf167Q5SNV9 1468 aa12.09□□□□□ -0.47
CCR9-203ENST00000395963 CGNL1Q0VF96 1302 aa12.08□□□□□ -0.47
CCR9-203ENST00000395963 PRR36Q9H6K5 1346 aa12.08□□□□□ -0.48
CCR9-203ENST00000395963 C14orf37Q86TY3 774 aa12.08□□□□□ -0.48
CCR9-203ENST00000395963 PANK3Q9H999 370 aa12.08□□□□□ -0.48
CCR9-203ENST00000395963 A0A1W2PP64 1363 aa12.08□□□□□ -0.48
CCR9-203ENST00000395963 KNSTRNQ9Y448 316 aa12.07□□□□□ -0.48
CCR9-203ENST00000395963 TTC21AQ8NDW8 1320 aa12.07□□□□□ -0.48
CCR9-203ENST00000395963 KIF20BQ96Q89 1820 aa12.07□□□□□ -0.48
CCR9-203ENST00000395963 RALBP1Q15311 655 aa12.07□□□□□ -0.48
CCR9-203ENST00000395963 ANP32CO43423 234 aa12.06□□□□□ -0.48
CCR9-203ENST00000395963 POLR3GLQ9BT43 218 aa12.06□□□□□ -0.48
CCR9-203ENST00000395963 USP6P35125 1406 aa12.06□□□□□ -0.48
CCR9-203ENST00000395963 SSH2Q76I76 1423 aa12.06□□□□□ -0.48
CCR9-203ENST00000395963 NSD3Q9BZ95 1437 aa12.06□□□□□ -0.48
CCR9-203ENST00000395963 BCL11AQ9H165 835 aa12.06□□□□□ -0.48
CCR9-203ENST00000395963 TMC1Q8TDI8 760 aa12.05□□□□□ -0.48
CCR9-203ENST00000395963 SLC12A5Q9H2X9 1139 aa12.05□□□□□ -0.48
CCR9-203ENST00000395963 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
CCR9-203ENST00000395963 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
CCR9-203ENST00000395963 PHF8Q9UPP1 1060 aa12.04□□□□□ -0.48
CCR9-203ENST00000395963 RGPD8O14715 1765 aaPredicted RBP12.04□□□□□ -0.48
CCR9-203ENST00000395963 CCER2I3L3R5 266 aa12.03□□□□□ -0.48
CCR9-203ENST00000395963 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
CCR9-203ENST00000395963 NHSL1Q5SYE7 1610 aa12.02□□□□□ -0.48
CCR9-203ENST00000395963 USP31Q70CQ4 1352 aa12.02□□□□□ -0.48
CCR9-203ENST00000395963 ACEP12821 1306 aa12.02□□□□□ -0.49
CCR9-203ENST00000395963 SBNO1A3KN83 1393 aa12.02□□□□□ -0.49
CCR9-203ENST00000395963 TRPM3Q9HCF6 1732 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms