RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 NWD1Q149M9 1564 aa21.01■□□□□ 0.95
PTPN20-206ENST00000395722 WAPLQ7Z5K2 1190 aa21.01■□□□□ 0.95
PTPN20-206ENST00000395722 PUS7Q96PZ0 661 aaKnown RBP21■□□□□ 0.95
PTPN20-206ENST00000395722 SAFB2Q14151 953 aaKnown RBP eCLIP20.98■□□□□ 0.95
PTPN20-206ENST00000395722 EVC2Q86UK5 1308 aa20.98■□□□□ 0.95
PTPN20-206ENST00000395722 ADGRB2O60241 1585 aa20.98■□□□□ 0.95
PTPN20-206ENST00000395722 MYOM1P52179 1685 aa20.97■□□□□ 0.95
PTPN20-206ENST00000395722 KCNA6P17658 529 aa20.97■□□□□ 0.95
PTPN20-206ENST00000395722 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.97■□□□□ 0.95
PTPN20-206ENST00000395722 MINK1Q8N4C8 1332 aaPredicted RBP20.96■□□□□ 0.95
PTPN20-206ENST00000395722 POLR3GLQ9BT43 218 aa20.94■□□□□ 0.94
PTPN20-206ENST00000395722 NKTRP30414 1462 aaKnown RBP20.92■□□□□ 0.94
PTPN20-206ENST00000395722 WASLO00401 505 aaPredicted RBP20.89■□□□□ 0.93
PTPN20-206ENST00000395722 CDK19Q9BWU1 502 aa20.89■□□□□ 0.93
PTPN20-206ENST00000395722 STRCP1A6NGW2 1772 aa20.89■□□□□ 0.93
PTPN20-206ENST00000395722 ATAD2Q6PL18 1390 aa20.88■□□□□ 0.93
PTPN20-206ENST00000395722 CABP2Q9NPB3 220 aa20.87■□□□□ 0.93
PTPN20-206ENST00000395722 NINLQ9Y2I6 1382 aa20.86■□□□□ 0.93
PTPN20-206ENST00000395722 SRPK2P78362 688 aaKnown RBP20.85■□□□□ 0.93
PTPN20-206ENST00000395722 NALCNQ8IZF0 1738 aa20.85■□□□□ 0.93
PTPN20-206ENST00000395722 CDC42BPGQ6DT37 1551 aa20.84■□□□□ 0.93
PTPN20-206ENST00000395722 ADGRL3Q9HAR2 1447 aa20.83■□□□□ 0.93
PTPN20-206ENST00000395722 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.93
PTPN20-206ENST00000395722 PANK3Q9H999 370 aa20.83■□□□□ 0.93
PTPN20-206ENST00000395722 DMRT2Q9Y5R5 561 aa20.83■□□□□ 0.93
PTPN20-206ENST00000395722 ATP7BP35670 1465 aa20.83■□□□□ 0.92
PTPN20-206ENST00000395722 SLC12A5Q9H2X9 1139 aa20.81■□□□□ 0.92
PTPN20-206ENST00000395722 NCOA3Q9Y6Q9 1424 aa20.81■□□□□ 0.92
PTPN20-206ENST00000395722 FMN2Q9NZ56 1722 aa20.8■□□□□ 0.92
PTPN20-206ENST00000395722 TOPAZ1Q8N9V7 1692 aa20.8■□□□□ 0.92
PTPN20-206ENST00000395722 MIER1Q8N108 512 aa20.8■□□□□ 0.92
PTPN20-206ENST00000395722 USP32Q8NFA0 1604 aa20.79■□□□□ 0.92
PTPN20-206ENST00000395722 PRR36Q9H6K5 1346 aa20.79■□□□□ 0.92
PTPN20-206ENST00000395722 PROSER2Q86WR7 435 aaPredicted RBP20.79■□□□□ 0.92
PTPN20-206ENST00000395722 ANKRD36BQ8N2N9 1353 aa20.78■□□□□ 0.92
PTPN20-206ENST00000395722 CD163L1Q9NR16 1453 aa20.78■□□□□ 0.92
PTPN20-206ENST00000395722 NUDT16Q96DE0 195 aaKnown RBP20.78■□□□□ 0.92
PTPN20-206ENST00000395722 ANKARQ7Z5J8 1434 aa20.78■□□□□ 0.92
PTPN20-206ENST00000395722 TMC1Q8TDI8 760 aa20.77■□□□□ 0.92
PTPN20-206ENST00000395722 ANP32CO43423 234 aa20.76■□□□□ 0.91
PTPN20-206ENST00000395722 CARD14Q9BXL6 1004 aa20.76■□□□□ 0.91
PTPN20-206ENST00000395722 CCDC61Q9Y6R9 512 aa20.76■□□□□ 0.91
PTPN20-206ENST00000395722 TMEM94Q12767 1356 aa20.75■□□□□ 0.91
PTPN20-206ENST00000395722 ZNF335Q9H4Z2 1342 aaPredicted RBP20.75■□□□□ 0.91
PTPN20-206ENST00000395722 PPIP5K1Q6PFW1 1433 aa20.75■□□□□ 0.91
PTPN20-206ENST00000395722 RBM33Q96EV2 1170 aaKnown RBP20.74■□□□□ 0.91
PTPN20-206ENST00000395722 CABP1Q9NZU7 370 aa20.74■□□□□ 0.91
PTPN20-206ENST00000395722 XIRP1Q702N8 1843 aaKnown RBP20.74■□□□□ 0.91
PTPN20-206ENST00000395722 ITSN1Q15811 1721 aa20.74■□□□□ 0.91
PTPN20-206ENST00000395722 LRRC7Q96NW7 1537 aa20.74■□□□□ 0.91
PTPN20-206ENST00000395722 NPC1L1Q9UHC9 1359 aa20.74■□□□□ 0.91
PTPN20-206ENST00000395722 A0A1W2PP64 1363 aa20.73■□□□□ 0.91
PTPN20-206ENST00000395722 CPSF1Q10570 1443 aaKnown RBP20.72■□□□□ 0.91
PTPN20-206ENST00000395722 PRKRIP1Q9H875 184 aaPredicted RBP20.72■□□□□ 0.91
PTPN20-206ENST00000395722 DCCP43146 1447 aa20.72■□□□□ 0.91
PTPN20-206ENST00000395722 TERF2IPQ9NYB0 399 aa20.72■□□□□ 0.91
PTPN20-206ENST00000395722 PLEKHG3A1L390 1219 aa20.71■□□□□ 0.91
PTPN20-206ENST00000395722 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
PTPN20-206ENST00000395722 KNSTRNQ9Y448 316 aa20.71■□□□□ 0.91
PTPN20-206ENST00000395722 NSD3Q9BZ95 1437 aa20.71■□□□□ 0.91
PTPN20-206ENST00000395722 C19orf44Q9H6X5 657 aa20.7■□□□□ 0.9
PTPN20-206ENST00000395722 RGPD8O14715 1765 aaPredicted RBP20.7■□□□□ 0.9
PTPN20-206ENST00000395722 AKAP12Q02952 1782 aa20.7■□□□□ 0.9
PTPN20-206ENST00000395722 KTN1Q86UP2 1357 aaKnown RBP20.7■□□□□ 0.9
PTPN20-206ENST00000395722 PARD3Q8TEW0 1356 aa20.68■□□□□ 0.9
PTPN20-206ENST00000395722 MON2Q7Z3U7 1717 aa20.68■□□□□ 0.9
PTPN20-206ENST00000395722 HDGFL2Q7Z4V5 671 aaPredicted RBP20.68■□□□□ 0.9
PTPN20-206ENST00000395722 C14orf37Q86TY3 774 aa20.68■□□□□ 0.9
PTPN20-206ENST00000395722 POLR3AO14802 1390 aaPredicted RBP20.66■□□□□ 0.9
PTPN20-206ENST00000395722 NUTM2FA1L443 756 aa20.66■□□□□ 0.9
PTPN20-206ENST00000395722 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
PTPN20-206ENST00000395722 LTBP4Q8N2S1 1624 aa20.65■□□□□ 0.9
PTPN20-206ENST00000395722 RALBP1Q15311 655 aa20.65■□□□□ 0.9
PTPN20-206ENST00000395722 CCER2I3L3R5 266 aa20.64■□□□□ 0.89
PTPN20-206ENST00000395722 EDC4Q6P2E9 1401 aaKnown RBP20.63■□□□□ 0.89
PTPN20-206ENST00000395722 ZNF692Q9BU19 519 aaPredicted RBP20.63■□□□□ 0.89
PTPN20-206ENST00000395722 NSD2O96028 1365 aa20.63■□□□□ 0.89
PTPN20-206ENST00000395722 MSH6P52701 1360 aa20.63■□□□□ 0.89
PTPN20-206ENST00000395722 NRKQ7Z2Y5 1582 aa20.63■□□□□ 0.89
PTPN20-206ENST00000395722 MST1RQ04912 1400 aa20.63■□□□□ 0.89
PTPN20-206ENST00000395722 ACEP12821 1306 aa20.62■□□□□ 0.89
PTPN20-206ENST00000395722 CGNL1Q0VF96 1302 aa20.62■□□□□ 0.89
PTPN20-206ENST00000395722 C1orf167Q5SNV9 1468 aa20.61■□□□□ 0.89
PTPN20-206ENST00000395722 CC2D1BQ5T0F9 858 aaKnown RBP20.61■□□□□ 0.89
PTPN20-206ENST00000395722 USP6P35125 1406 aa20.6■□□□□ 0.89
PTPN20-206ENST00000395722 SSH2Q76I76 1423 aa20.6■□□□□ 0.89
PTPN20-206ENST00000395722 CADPS2Q86UW7 1296 aa20.6■□□□□ 0.89
PTPN20-206ENST00000395722 ATF3P18847 181 aa20.59■□□□□ 0.89
PTPN20-206ENST00000395722 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.89
PTPN20-206ENST00000395722 KIF20BQ96Q89 1820 aa20.58■□□□□ 0.89
PTPN20-206ENST00000395722 PHF8Q9UPP1 1060 aa20.58■□□□□ 0.89
PTPN20-206ENST00000395722 KIF1AQ12756 1690 aa20.58■□□□□ 0.88
PTPN20-206ENST00000395722 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
PTPN20-206ENST00000395722 PMFBP1Q8TBY8 1022 aa20.57■□□□□ 0.88
PTPN20-206ENST00000395722 FYB1O15117 783 aa20.56■□□□□ 0.88
PTPN20-206ENST00000395722 CNGB1Q14028 1251 aaPredicted RBP20.55■□□□□ 0.88
PTPN20-206ENST00000395722 NGDNQ8NEJ9 315 aaKnown RBP20.55■□□□□ 0.88
PTPN20-206ENST00000395722 BRD4O60885 1362 aaPredicted RBP20.55■□□□□ 0.88
PTPN20-206ENST00000395722 ESCO1Q5FWF5 840 aa20.54■□□□□ 0.88
PTPN20-206ENST00000395722 TTC21BQ7Z4L5 1316 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms