RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
PTPN20-205ENST00000395721 NRXN1Q9ULB1 1477 aa12.88□□□□□ -0.35
PTPN20-205ENST00000395721 DHX57Q6P158 1386 aaKnown RBP12.88□□□□□ -0.35
PTPN20-205ENST00000395721 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
PTPN20-205ENST00000395721 LRP6O75581 1613 aa12.87□□□□□ -0.35
PTPN20-205ENST00000395721 NUTM2BA6NNL0 878 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-205ENST00000395721 NUTM2EB1AL46 878 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-205ENST00000395721 NUTM2AQ8IVF1 878 aaPredicted RBP12.87□□□□□ -0.35
PTPN20-205ENST00000395721 WAPLQ7Z5K2 1190 aa12.86□□□□□ -0.35
PTPN20-205ENST00000395721 CFAP70Q5T0N1 1121 aa12.86□□□□□ -0.35
PTPN20-205ENST00000395721 DDX17Q92841 729 aaKnown RBP12.86□□□□□ -0.35
PTPN20-205ENST00000395721 POTEAQ6S8J7 498 aa12.86□□□□□ -0.35
PTPN20-205ENST00000395721 ORAI2Q96SN7 254 aa12.86□□□□□ -0.35
PTPN20-205ENST00000395721 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
PTPN20-205ENST00000395721 PLEKHH1Q9ULM0 1364 aa12.85□□□□□ -0.35
PTPN20-205ENST00000395721 ESCO1Q5FWF5 840 aa12.84□□□□□ -0.35
PTPN20-205ENST00000395721 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
PTPN20-205ENST00000395721 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
PTPN20-205ENST00000395721 ZNF772Q68DY9 489 aaPredicted RBP12.83□□□□□ -0.36
PTPN20-205ENST00000395721 DCAF11Q8TEB1 546 aa12.83□□□□□ -0.36
PTPN20-205ENST00000395721 NPHP3Q7Z494 1330 aa12.83□□□□□ -0.36
PTPN20-205ENST00000395721 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
PTPN20-205ENST00000395721 NUTM2FA1L443 756 aa12.82□□□□□ -0.36
PTPN20-205ENST00000395721 POGKQ9P215 609 aa12.82□□□□□ -0.36
PTPN20-205ENST00000395721 SOS2Q07890 1332 aaPredicted RBP12.82□□□□□ -0.36
PTPN20-205ENST00000395721 DLC1Q96QB1 1528 aa12.81□□□□□ -0.36
PTPN20-205ENST00000395721 FMN2Q9NZ56 1722 aa12.81□□□□□ -0.36
PTPN20-205ENST00000395721 PRAM1Q96QH2 718 aa12.81□□□□□ -0.36
PTPN20-205ENST00000395721 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
PTPN20-205ENST00000395721 SAFB2Q14151 953 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTPN20-205ENST00000395721 AFF2P51816 1311 aa12.79□□□□□ -0.36
PTPN20-205ENST00000395721 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
PTPN20-205ENST00000395721 KIF1AQ12756 1690 aa12.78□□□□□ -0.36
PTPN20-205ENST00000395721 C8orf37Q96NL8 207 aa12.78□□□□□ -0.36
PTPN20-205ENST00000395721 ADGRB1O14514 1584 aa12.78□□□□□ -0.36
PTPN20-205ENST00000395721 FOXO3O43524 673 aa12.78□□□□□ -0.36
PTPN20-205ENST00000395721 TRAK1Q9UPV9 953 aa12.78□□□□□ -0.36
PTPN20-205ENST00000395721 ADAMTS2O95450 1211 aa12.77□□□□□ -0.36
PTPN20-205ENST00000395721 XPCQ01831 940 aaPredicted RBP12.77□□□□□ -0.37
PTPN20-205ENST00000395721 GTF3C3Q9Y5Q9 886 aa12.77□□□□□ -0.37
PTPN20-205ENST00000395721 PXDNQ92626 1479 aa12.76□□□□□ -0.37
PTPN20-205ENST00000395721 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
PTPN20-205ENST00000395721 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
PTPN20-205ENST00000395721 NGLY1Q96IV0 654 aa12.75□□□□□ -0.37
PTPN20-205ENST00000395721 RXRBP28702 533 aa12.75□□□□□ -0.37
PTPN20-205ENST00000395721 ANKARQ7Z5J8 1434 aa12.74□□□□□ -0.37
PTPN20-205ENST00000395721 COL22A1Q8NFW1 1626 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-205ENST00000395721 ADGRB2O60241 1585 aa12.74□□□□□ -0.37
PTPN20-205ENST00000395721 MINK1Q8N4C8 1332 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-205ENST00000395721 ZEB1P37275 1124 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-205ENST00000395721 KRT28Q7Z3Y7 464 aa12.73□□□□□ -0.37
PTPN20-205ENST00000395721 PSME1Q06323 249 aa12.73□□□□□ -0.37
PTPN20-205ENST00000395721 HIRIP3Q9BW71 556 aaPredicted RBP12.72□□□□□ -0.37
PTPN20-205ENST00000395721 SPATA31A3Q5VYP0 1347 aa12.72□□□□□ -0.37
PTPN20-205ENST00000395721 QTRT2Q9H974 415 aaKnown RBP12.71□□□□□ -0.38
PTPN20-205ENST00000395721 CDK12Q9NYV4 1490 aaPredicted RBP12.71□□□□□ -0.38
PTPN20-205ENST00000395721 RGPD8O14715 1765 aaPredicted RBP12.7□□□□□ -0.38
PTPN20-205ENST00000395721 TNS3Q68CZ2 1445 aa12.7□□□□□ -0.38
PTPN20-205ENST00000395721 KIAA1210Q9ULL0 1709 aa12.7□□□□□ -0.38
PTPN20-205ENST00000395721 TULP4Q9NRJ4 1543 aa12.7□□□□□ -0.38
PTPN20-205ENST00000395721 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
PTPN20-205ENST00000395721 RBM6P78332 1123 aaKnown RBP12.7□□□□□ -0.38
PTPN20-205ENST00000395721 USP21Q9UK80 565 aa12.7□□□□□ -0.38
PTPN20-205ENST00000395721 ARHGEF28Q8N1W1 1705 aaKnown RBP12.7□□□□□ -0.38
PTPN20-205ENST00000395721 WASLO00401 505 aaPredicted RBP12.69□□□□□ -0.38
PTPN20-205ENST00000395721 PMFBP1Q8TBY8 1022 aa12.69□□□□□ -0.38
PTPN20-205ENST00000395721 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
PTPN20-205ENST00000395721 USP32Q8NFA0 1604 aa12.69□□□□□ -0.38
PTPN20-205ENST00000395721 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
PTPN20-205ENST00000395721 TRPC5Q9UL62 973 aaPredicted RBP12.68□□□□□ -0.38
PTPN20-205ENST00000395721 ARHGEF10O15013 1369 aa12.68□□□□□ -0.38
PTPN20-205ENST00000395721 GPRASP1Q5JY77 1395 aa12.68□□□□□ -0.38
PTPN20-205ENST00000395721 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-205ENST00000395721 PRR36Q9H6K5 1346 aa12.67□□□□□ -0.38
PTPN20-205ENST00000395721 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
PTPN20-205ENST00000395721 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
PTPN20-205ENST00000395721 NGDNQ8NEJ9 315 aaKnown RBP12.66□□□□□ -0.38
PTPN20-205ENST00000395721 RGS12O14924 1447 aa12.65□□□□□ -0.38
PTPN20-205ENST00000395721 ATRNO75882 1429 aa12.65□□□□□ -0.38
PTPN20-205ENST00000395721 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
PTPN20-205ENST00000395721 NBPF1Q3BBV0 1214 aa12.64□□□□□ -0.39
PTPN20-205ENST00000395721 SIN3AQ96ST3 1273 aa12.64□□□□□ -0.39
PTPN20-205ENST00000395721 ITSN1Q15811 1721 aa12.64□□□□□ -0.39
PTPN20-205ENST00000395721 NUDT16Q96DE0 195 aaKnown RBP12.64□□□□□ -0.39
PTPN20-205ENST00000395721 CDK19Q9BWU1 502 aa12.63□□□□□ -0.39
PTPN20-205ENST00000395721 ATP7BP35670 1465 aa12.63□□□□□ -0.39
PTPN20-205ENST00000395721 CENPJQ9HC77 1338 aaPredicted RBP12.63□□□□□ -0.39
PTPN20-205ENST00000395721 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
PTPN20-205ENST00000395721 UPF1Q92900 1129 aaKnown RBP eCLIP12.62□□□□□ -0.39
PTPN20-205ENST00000395721 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-205ENST00000395721 BCL9LQ86UU0 1499 aa12.61□□□□□ -0.39
PTPN20-205ENST00000395721 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
PTPN20-205ENST00000395721 UNC5CLQ8IV45 518 aa12.61□□□□□ -0.39
PTPN20-205ENST00000395721 ABCA3Q99758 1704 aa12.61□□□□□ -0.39
PTPN20-205ENST00000395721 SLIT2O94813 1529 aa12.6□□□□□ -0.39
PTPN20-205ENST00000395721 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.6□□□□□ -0.39
PTPN20-205ENST00000395721 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
PTPN20-205ENST00000395721 ATAD2Q6PL18 1390 aa12.59□□□□□ -0.39
PTPN20-205ENST00000395721 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
PTPN20-205ENST00000395721 ALS2Q96Q42 1657 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms