RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 OSBPP22059 807 aa13.33□□□□□ -0.28
PFDN6-205ENST00000395134 DSG2Q14126 1118 aa13.33□□□□□ -0.28
PFDN6-205ENST00000395134 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
PFDN6-205ENST00000395134 REREQ9P2R6 1566 aa13.32□□□□□ -0.28
PFDN6-205ENST00000395134 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
PFDN6-205ENST00000395134 MLH3Q9UHC1 1453 aa13.31□□□□□ -0.28
PFDN6-205ENST00000395134 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
PFDN6-205ENST00000395134 FBXO41Q8TF61 875 aa13.3□□□□□ -0.28
PFDN6-205ENST00000395134 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
PFDN6-205ENST00000395134 PROCA1Q8NCQ7 364 aaPredicted RBP13.29□□□□□ -0.28
PFDN6-205ENST00000395134 TMUB1Q9BVT8 246 aa13.29□□□□□ -0.28
PFDN6-205ENST00000395134 CLTCQ00610 1675 aaKnown RBP13.28□□□□□ -0.28
PFDN6-205ENST00000395134 ATP7AQ04656 1500 aa13.28□□□□□ -0.28
PFDN6-205ENST00000395134 TIAM1Q13009 1591 aa13.28□□□□□ -0.28
PFDN6-205ENST00000395134 INO80Q9ULG1 1556 aaPredicted RBP13.28□□□□□ -0.28
PFDN6-205ENST00000395134 MTUS2Q5JR59 1369 aa13.27□□□□□ -0.29
PFDN6-205ENST00000395134 UHRF1BP1Q6BDS2 1440 aa13.27□□□□□ -0.29
PFDN6-205ENST00000395134 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
PFDN6-205ENST00000395134 AGLP35573 1532 aa13.26□□□□□ -0.29
PFDN6-205ENST00000395134 HNRNPMP52272 730 aaKnown RBP eCLIP13.26□□□□□ -0.29
PFDN6-205ENST00000395134 EHBP1L1Q8N3D4 1523 aa13.25□□□□□ -0.29
PFDN6-205ENST00000395134 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
PFDN6-205ENST00000395134 CCNB3Q8WWL7 1395 aa13.25□□□□□ -0.29
PFDN6-205ENST00000395134 CLCN1P35523 988 aa13.25□□□□□ -0.29
PFDN6-205ENST00000395134 FOXK1P85037 733 aa13.25□□□□□ -0.29
PFDN6-205ENST00000395134 BANK1Q8NDB2 785 aa13.25□□□□□ -0.29
PFDN6-205ENST00000395134 MROH2AA6NES4 1674 aa13.24□□□□□ -0.29
PFDN6-205ENST00000395134 SPAG9O60271 1321 aaKnown RBP13.24□□□□□ -0.29
PFDN6-205ENST00000395134 ESF1Q9H501 851 aaKnown RBP13.24□□□□□ -0.29
PFDN6-205ENST00000395134 MAP3K9P80192 1104 aa13.23□□□□□ -0.29
PFDN6-205ENST00000395134 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
PFDN6-205ENST00000395134 ADGBQ8N7X0 1667 aa13.23□□□□□ -0.29
PFDN6-205ENST00000395134 KCNA1Q09470 495 aa13.22□□□□□ -0.29
PFDN6-205ENST00000395134 PTGDRQ13258 359 aa13.22□□□□□ -0.29
PFDN6-205ENST00000395134 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.22□□□□□ -0.29
PFDN6-205ENST00000395134 PLXNC1O60486 1568 aa13.22□□□□□ -0.29
PFDN6-205ENST00000395134 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
PFDN6-205ENST00000395134 SSTR3P32745 418 aaPredicted RBP13.21□□□□□ -0.29
PFDN6-205ENST00000395134 GPCPD1Q9NPB8 672 aa13.21□□□□□ -0.29
PFDN6-205ENST00000395134 SNRKQ9NRH2 765 aa13.21□□□□□ -0.29
PFDN6-205ENST00000395134 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
PFDN6-205ENST00000395134 PLEKHH2Q8IVE3 1493 aa13.21□□□□□ -0.3
PFDN6-205ENST00000395134 PTGER2P43116 358 aa13.2□□□□□ -0.3
PFDN6-205ENST00000395134 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
PFDN6-205ENST00000395134 A2MP01023 1474 aa13.19□□□□□ -0.3
PFDN6-205ENST00000395134 BRD1O95696 1058 aa13.19□□□□□ -0.3
PFDN6-205ENST00000395134 CERKQ8TCT0 537 aa13.19□□□□□ -0.3
PFDN6-205ENST00000395134 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
PFDN6-205ENST00000395134 CNTLNQ9NXG0 1405 aa13.19□□□□□ -0.3
PFDN6-205ENST00000395134 HMGB1P09429 215 aaKnown RBP13.18□□□□□ -0.3
PFDN6-205ENST00000395134 TMC2Q8TDI7 906 aa13.18□□□□□ -0.3
PFDN6-205ENST00000395134 CALR3Q96L12 384 aaKnown RBP13.18□□□□□ -0.3
PFDN6-205ENST00000395134 BEGAINQ9BUH8 593 aa13.18□□□□□ -0.3
PFDN6-205ENST00000395134 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
PFDN6-205ENST00000395134 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
PFDN6-205ENST00000395134 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
PFDN6-205ENST00000395134 ZNF142P52746 1687 aaPredicted RBP13.16□□□□□ -0.3
PFDN6-205ENST00000395134 MDM2Q00987 491 aaPredicted RBP13.16□□□□□ -0.3
PFDN6-205ENST00000395134 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
PFDN6-205ENST00000395134 CAMSAP2Q08AD1 1489 aa13.16□□□□□ -0.3
PFDN6-205ENST00000395134 NCOA2Q15596 1464 aa13.16□□□□□ -0.3
PFDN6-205ENST00000395134 GGT6Q6P531 493 aa13.15□□□□□ -0.3
PFDN6-205ENST00000395134 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
PFDN6-205ENST00000395134 TMEM106CQ9BVX2 250 aa13.15□□□□□ -0.3
PFDN6-205ENST00000395134 TBC1D12O60347 775 aa13.14□□□□□ -0.31
PFDN6-205ENST00000395134 CEP170BQ9Y4F5 1589 aaPredicted RBP13.14□□□□□ -0.31
PFDN6-205ENST00000395134 NCOA1Q15788 1441 aa13.13□□□□□ -0.31
PFDN6-205ENST00000395134 MBD5Q9P267 1494 aa13.13□□□□□ -0.31
PFDN6-205ENST00000395134 ZMYM3Q14202 1370 aa13.13□□□□□ -0.31
PFDN6-205ENST00000395134 RFC5P40937 340 aa13.13□□□□□ -0.31
PFDN6-205ENST00000395134 DDX12PQ92771 950 aa13.13□□□□□ -0.31
PFDN6-205ENST00000395134 PRIM1P49642 420 aaKnown RBP13.12□□□□□ -0.31
PFDN6-205ENST00000395134 TMEM259Q4ZIN3 620 aa13.12□□□□□ -0.31
PFDN6-205ENST00000395134 NPATQ14207 1427 aa13.12□□□□□ -0.31
PFDN6-205ENST00000395134 CCDC141Q6ZP82 1450 aa13.11□□□□□ -0.31
PFDN6-205ENST00000395134 MYSM1Q5VVJ2 828 aa13.11□□□□□ -0.31
PFDN6-205ENST00000395134 GDPD2Q9HCC8 539 aa13.11□□□□□ -0.31
PFDN6-205ENST00000395134 USTQ9Y2C2 406 aa13.11□□□□□ -0.31
PFDN6-205ENST00000395134 PBXIP1Q96AQ6 731 aa13.1□□□□□ -0.31
PFDN6-205ENST00000395134 PTPRTO14522 1441 aa13.1□□□□□ -0.31
PFDN6-205ENST00000395134 PTPRKQ15262 1439 aa13.1□□□□□ -0.31
PFDN6-205ENST00000395134 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
PFDN6-205ENST00000395134 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
PFDN6-205ENST00000395134 CLK2P49760 499 aaKnown RBP13.09□□□□□ -0.31
PFDN6-205ENST00000395134 GLMNQ92990 594 aa13.09□□□□□ -0.31
PFDN6-205ENST00000395134 VPS8Q8N3P4 1428 aa13.08□□□□□ -0.32
PFDN6-205ENST00000395134 CCDC27Q2M243 656 aa13.08□□□□□ -0.32
PFDN6-205ENST00000395134 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
PFDN6-205ENST00000395134 HSP90B1P14625 803 aaKnown RBP13.07□□□□□ -0.32
PFDN6-205ENST00000395134 PHOX2BQ99453 314 aa13.07□□□□□ -0.32
PFDN6-205ENST00000395134 FAM217BQ9NTX9 383 aaPredicted RBP13.07□□□□□ -0.32
PFDN6-205ENST00000395134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.324e-8■■□□□ 13.1
PFDN6-205ENST00000395134 CEP152O94986 1710 aa13.07□□□□□ -0.32
PFDN6-205ENST00000395134 LRRC9Q6ZRR7 1453 aa13.06□□□□□ -0.32
PFDN6-205ENST00000395134 KIF3BO15066 747 aa13.06□□□□□ -0.32
PFDN6-205ENST00000395134 KDM5DQ9BY66 1539 aa13.06□□□□□ -0.32
PFDN6-205ENST00000395134 DNMT1P26358 1616 aaKnown RBP13.06□□□□□ -0.32
PFDN6-205ENST00000395134 RTEL1-TNFRSF6BF6WH68 1400 aa13.05□□□□□ -0.32
PFDN6-205ENST00000395134 DHX29Q7Z478 1369 aaKnown RBP13.05□□□□□ -0.32
PFDN6-205ENST00000395134 POM121CA8CG34 1229 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms