RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 NAIPQ13075 1403 aa24.12■■□□□ 1.45
SNCA-205ENST00000394991 SRCAPQ6ZRS2 3230 aa24.12■■□□□ 1.45
SNCA-205ENST00000394991 HFM1A2PYH4 1435 aa24.11■■□□□ 1.45
SNCA-205ENST00000394991 PXDNQ92626 1479 aa24.11■■□□□ 1.45
SNCA-205ENST00000394991 VGFO15240 615 aaPredicted RBP24.1■■□□□ 1.45
SNCA-205ENST00000394991 EP400Q96L91 3159 aa24.09■■□□□ 1.45
SNCA-205ENST00000394991 BCL9LQ86UU0 1499 aa24.07■■□□□ 1.44
SNCA-205ENST00000394991 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.07■■□□□ 1.44
SNCA-205ENST00000394991 RRBP1Q9P2E9 1410 aaKnown RBP24.05■■□□□ 1.44
SNCA-205ENST00000394991 RPGRIP1LQ68CZ1 1315 aa24.05■■□□□ 1.44
SNCA-205ENST00000394991 NPHP3Q7Z494 1330 aa24.04■■□□□ 1.44
SNCA-205ENST00000394991 ESCO1Q5FWF5 840 aa24.02■■□□□ 1.44
SNCA-205ENST00000394991 IFT172Q9UG01 1749 aa24.01■■□□□ 1.43
SNCA-205ENST00000394991 XPCQ01831 940 aaPredicted RBP24.01■■□□□ 1.43
SNCA-205ENST00000394991 KNDC1Q76NI1 1749 aa24.01■■□□□ 1.43
SNCA-205ENST00000394991 BRWD3Q6RI45 1802 aa24■■□□□ 1.43
SNCA-205ENST00000394991 GLI3P10071 1580 aa24■■□□□ 1.43
SNCA-205ENST00000394991 FMN2Q9NZ56 1722 aa24■■□□□ 1.43
SNCA-205ENST00000394991 FOXO3O43524 673 aa23.98■■□□□ 1.43
SNCA-205ENST00000394991 ZRANB1Q9UGI0 708 aa23.98■■□□□ 1.43
SNCA-205ENST00000394991 TECPR2O15040 1411 aa23.97■■□□□ 1.43
SNCA-205ENST00000394991 KIF1AQ12756 1690 aa23.96■■□□□ 1.43
SNCA-205ENST00000394991 ADGRF5Q8IZF2 1346 aa23.96■■□□□ 1.43
SNCA-205ENST00000394991 GJD4Q96KN9 370 aaPredicted RBP23.96■■□□□ 1.43
SNCA-205ENST00000394991 RGPD8O14715 1765 aaPredicted RBP23.95■■□□□ 1.42
SNCA-205ENST00000394991 USP32Q8NFA0 1604 aa23.95■■□□□ 1.42
SNCA-205ENST00000394991 SLIT2O94813 1529 aa23.94■■□□□ 1.42
SNCA-205ENST00000394991 NUTM2FA1L443 756 aa23.94■■□□□ 1.42
SNCA-205ENST00000394991 WAPLQ7Z5K2 1190 aa23.94■■□□□ 1.42
SNCA-205ENST00000394991 SLC4A1APQ9BWU0 796 aaKnown RBP23.94■■□□□ 1.42
SNCA-205ENST00000394991 RALGAPBQ86X10 1494 aa23.94■■□□□ 1.42
SNCA-205ENST00000394991 PLEKHH1Q9ULM0 1364 aa23.93■■□□□ 1.42
SNCA-205ENST00000394991 CCDC125Q86Z20 511 aa23.93■■□□□ 1.42
SNCA-205ENST00000394991 LRPPRCP42704 1394 aaKnown RBP23.92■■□□□ 1.42
SNCA-205ENST00000394991 STK26Q9P289 416 aa23.92■■□□□ 1.42
SNCA-205ENST00000394991 FOXD1Q16676 465 aa23.91■■□□□ 1.42
SNCA-205ENST00000394991 ABCA3Q99758 1704 aa23.9■■□□□ 1.42
SNCA-205ENST00000394991 SPATA31E1Q6ZUB1 1445 aa23.9■■□□□ 1.42
SNCA-205ENST00000394991 PLCH1Q4KWH8 1693 aa23.89■■□□□ 1.42
SNCA-205ENST00000394991 SPATA31A3Q5VYP0 1347 aa23.89■■□□□ 1.42
SNCA-205ENST00000394991 UNC5CLQ8IV45 518 aa23.89■■□□□ 1.41
SNCA-205ENST00000394991 BLMP54132 1417 aaPredicted RBP23.88■■□□□ 1.41
SNCA-205ENST00000394991 ABCC11Q96J66 1382 aa23.88■■□□□ 1.41
SNCA-205ENST00000394991 CCDC144AA2RUR9 1427 aa23.87■■□□□ 1.41
SNCA-205ENST00000394991 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
SNCA-205ENST00000394991 NWD2Q9ULI1 1742 aa23.86■■□□□ 1.41
SNCA-205ENST00000394991 PIK3C2GO75747 1445 aa23.85■■□□□ 1.41
SNCA-205ENST00000394991 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
SNCA-205ENST00000394991 YTHDC2Q9H6S0 1430 aaKnown RBP23.84■■□□□ 1.41
SNCA-205ENST00000394991 ANKRD30BQ9BXX2 1392 aa23.83■■□□□ 1.41
SNCA-205ENST00000394991 DEFB132Q7Z7B7 95 aa23.82■■□□□ 1.4
SNCA-205ENST00000394991 TNS3Q68CZ2 1445 aa23.82■■□□□ 1.4
SNCA-205ENST00000394991 KRT28Q7Z3Y7 464 aa23.81■■□□□ 1.4
SNCA-205ENST00000394991 LRP5O75197 1615 aa23.79■■□□□ 1.4
SNCA-205ENST00000394991 SEPT12Q8IYM1 358 aa23.78■■□□□ 1.4
SNCA-205ENST00000394991 CABLES1Q8TDN4 633 aa23.78■■□□□ 1.4
SNCA-205ENST00000394991 NRAPQ86VF7 1730 aa23.78■■□□□ 1.4
SNCA-205ENST00000394991 NRXN1Q9ULB1 1477 aa23.77■■□□□ 1.4
SNCA-205ENST00000394991 VPS72Q15906 364 aa23.76■■□□□ 1.39
SNCA-205ENST00000394991 PHF8Q9UPP1 1060 aa23.75■■□□□ 1.39
SNCA-205ENST00000394991 SIRT1Q96EB6 747 aa23.74■■□□□ 1.39
SNCA-205ENST00000394991 TRPM3Q9HCF6 1732 aaPredicted RBP23.73■■□□□ 1.39
SNCA-205ENST00000394991 PLEKHG5O94827 1062 aa23.73■■□□□ 1.39
SNCA-205ENST00000394991 HAP1P54257 671 aaPredicted RBP23.73■■□□□ 1.39
SNCA-205ENST00000394991 SBNO1A3KN83 1393 aa23.73■■□□□ 1.39
SNCA-205ENST00000394991 ONECUT3O60422 494 aaPredicted RBP23.72■■□□□ 1.39
SNCA-205ENST00000394991 MPHOSPH9Q99550 1183 aa23.71■■□□□ 1.39
SNCA-205ENST00000394991 PSME1Q06323 249 aa23.7■■□□□ 1.38
SNCA-205ENST00000394991 SF3B2Q13435 895 aaKnown RBP23.7■■□□□ 1.38
SNCA-205ENST00000394991 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
SNCA-205ENST00000394991 ALS2Q96Q42 1657 aa23.7■■□□□ 1.38
SNCA-205ENST00000394991 ARHGEF10O15013 1369 aa23.69■■□□□ 1.38
SNCA-205ENST00000394991 KRT27Q7Z3Y8 459 aa23.69■■□□□ 1.38
SNCA-205ENST00000394991 CCDC9Q9Y3X0 531 aaKnown RBP23.69■■□□□ 1.38
SNCA-205ENST00000394991 ADGRB2O60241 1585 aa23.69■■□□□ 1.38
SNCA-205ENST00000394991 CFAP70Q5T0N1 1121 aa23.67■■□□□ 1.38
SNCA-205ENST00000394991 CRYBG1Q9Y4K1 1723 aa23.67■■□□□ 1.38
SNCA-205ENST00000394991 DLC1Q96QB1 1528 aa23.66■■□□□ 1.38
SNCA-205ENST00000394991 FAM83GA6ND36 823 aa23.66■■□□□ 1.38
SNCA-205ENST00000394991 SAFB2Q14151 953 aaKnown RBP eCLIP23.66■■□□□ 1.38
SNCA-205ENST00000394991 LMOD2Q6P5Q4 547 aa23.66■■□□□ 1.38
SNCA-205ENST00000394991 RGPD1P0DJD0 1748 aa23.66■■□□□ 1.38
SNCA-205ENST00000394991 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
SNCA-205ENST00000394991 COL14A1Q05707 1796 aaKnown RBP23.65■■□□□ 1.38
SNCA-205ENST00000394991 PRAM1Q96QH2 718 aa23.65■■□□□ 1.38
SNCA-205ENST00000394991 ANKARQ7Z5J8 1434 aa23.65■■□□□ 1.38
SNCA-205ENST00000394991 PMFBP1Q8TBY8 1022 aa23.63■■□□□ 1.37
SNCA-205ENST00000394991 TNS1Q9HBL0 1735 aaKnown RBP23.62■■□□□ 1.37
SNCA-205ENST00000394991 PSDA5PKW4 1024 aaPredicted RBP23.62■■□□□ 1.37
SNCA-205ENST00000394991 FAM98CQ17RN3 349 aaKnown RBP23.61■■□□□ 1.37
SNCA-205ENST00000394991 ADGRB1O14514 1584 aa23.61■■□□□ 1.37
SNCA-205ENST00000394991 THSD7AQ9UPZ6 1657 aa23.6■■□□□ 1.37
SNCA-205ENST00000394991 A0A0G2JS52 829 aa23.6■■□□□ 1.37
SNCA-205ENST00000394991 BAG6P46379 1132 aa23.6■■□□□ 1.37
SNCA-205ENST00000394991 MYT1Q01538 1121 aa23.6■■□□□ 1.37
SNCA-205ENST00000394991 HRCP23327 699 aa23.58■■□□□ 1.37
SNCA-205ENST00000394991 BTG4Q9NY30 223 aa23.58■■□□□ 1.37
SNCA-205ENST00000394991 POGKQ9P215 609 aa23.56■■□□□ 1.36
SNCA-205ENST00000394991 PRR36Q9H6K5 1346 aa23.56■■□□□ 1.36
SNCA-205ENST00000394991 TULP4Q9NRJ4 1543 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms