RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ADGRF5Q8IZF2 1346 aa31.71■■■□□ 2.67
TRAF4-203ENST00000394925 TRPC5Q9UL62 973 aaPredicted RBP31.7■■■□□ 2.67
TRAF4-203ENST00000394925 CDC42BPGQ6DT37 1551 aa31.69■■■□□ 2.66
TRAF4-203ENST00000394925 RGL3Q3MIN7 710 aa31.69■■■□□ 2.66
TRAF4-203ENST00000394925 FNBP4Q8N3X1 1017 aaPredicted RBP31.69■■■□□ 2.66
TRAF4-203ENST00000394925 STK26Q9P289 416 aa31.69■■■□□ 2.66
TRAF4-203ENST00000394925 NPHP3Q7Z494 1330 aa31.69■■■□□ 2.66
TRAF4-203ENST00000394925 COL22A1Q8NFW1 1626 aaPredicted RBP31.68■■■□□ 2.66
TRAF4-203ENST00000394925 XPCQ01831 940 aaPredicted RBP31.66■■■□□ 2.66
TRAF4-203ENST00000394925 WAPLQ7Z5K2 1190 aa31.66■■■□□ 2.66
TRAF4-203ENST00000394925 CCDC144AA2RUR9 1427 aa31.66■■■□□ 2.66
TRAF4-203ENST00000394925 NUTM2FA1L443 756 aa31.65■■■□□ 2.66
TRAF4-203ENST00000394925 FOXO3O43524 673 aa31.65■■■□□ 2.66
TRAF4-203ENST00000394925 ATAD2Q6PL18 1390 aa31.64■■■□□ 2.66
TRAF4-203ENST00000394925 MYOM2P54296 1465 aa31.64■■■□□ 2.66
TRAF4-203ENST00000394925 PXDNQ92626 1479 aa31.64■■■□□ 2.66
TRAF4-203ENST00000394925 ATRNO75882 1429 aa31.63■■■□□ 2.65
TRAF4-203ENST00000394925 SPATA31E1Q6ZUB1 1445 aa31.6■■■□□ 2.65
TRAF4-203ENST00000394925 LRPPRCP42704 1394 aaKnown RBP31.6■■■□□ 2.65
TRAF4-203ENST00000394925 TMEM132EQ6IEE7 984 aa31.6■■■□□ 2.65
TRAF4-203ENST00000394925 TECPR2O15040 1411 aa31.59■■■□□ 2.65
TRAF4-203ENST00000394925 ANKRD30BQ9BXX2 1392 aa31.59■■■□□ 2.65
TRAF4-203ENST00000394925 MPHOSPH9Q99550 1183 aa31.58■■■□□ 2.65
TRAF4-203ENST00000394925 IFT172Q9UG01 1749 aa31.58■■■□□ 2.65
TRAF4-203ENST00000394925 MARF1Q9Y4F3 1742 aaKnown RBP31.57■■■□□ 2.64
TRAF4-203ENST00000394925 ABCC11Q96J66 1382 aa31.56■■■□□ 2.64
TRAF4-203ENST00000394925 PLEKHH1Q9ULM0 1364 aa31.56■■■□□ 2.64
TRAF4-203ENST00000394925 BCL9LQ86UU0 1499 aa31.55■■■□□ 2.64
TRAF4-203ENST00000394925 KNDC1Q76NI1 1749 aa31.53■■■□□ 2.64
TRAF4-203ENST00000394925 SRCAPQ6ZRS2 3230 aa31.51■■■□□ 2.64
TRAF4-203ENST00000394925 PIK3C2GO75747 1445 aa31.51■■■□□ 2.64
TRAF4-203ENST00000394925 EP400Q96L91 3159 aa31.51■■■□□ 2.64
TRAF4-203ENST00000394925 YTHDC2Q9H6S0 1430 aaKnown RBP31.49■■■□□ 2.63
TRAF4-203ENST00000394925 FMN2Q9NZ56 1722 aa31.49■■■□□ 2.63
TRAF4-203ENST00000394925 GJD4Q96KN9 370 aaPredicted RBP31.49■■■□□ 2.63
TRAF4-203ENST00000394925 SPATA31A3Q5VYP0 1347 aa31.47■■■□□ 2.63
TRAF4-203ENST00000394925 KRT28Q7Z3Y7 464 aa31.45■■■□□ 2.63
TRAF4-203ENST00000394925 KIF1AQ12756 1690 aa31.44■■■□□ 2.62
TRAF4-203ENST00000394925 UNC5CLQ8IV45 518 aa31.43■■■□□ 2.62
TRAF4-203ENST00000394925 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.41■■■□□ 2.62
TRAF4-203ENST00000394925 SIRT1Q96EB6 747 aa31.41■■■□□ 2.62
TRAF4-203ENST00000394925 C14orf93Q9H972 538 aaKnown RBP31.41■■■□□ 2.62
TRAF4-203ENST00000394925 RGPD8O14715 1765 aaPredicted RBP31.4■■■□□ 2.62
TRAF4-203ENST00000394925 CCDC125Q86Z20 511 aa31.4■■■□□ 2.62
TRAF4-203ENST00000394925 ZRANB1Q9UGI0 708 aa31.4■■■□□ 2.62
TRAF4-203ENST00000394925 PHF8Q9UPP1 1060 aa31.39■■■□□ 2.62
TRAF4-203ENST00000394925 SLIT2O94813 1529 aa31.39■■■□□ 2.61
TRAF4-203ENST00000394925 CFAP70Q5T0N1 1121 aa31.38■■■□□ 2.61
TRAF4-203ENST00000394925 RALGAPBQ86X10 1494 aa31.38■■■□□ 2.61
TRAF4-203ENST00000394925 HAP1P54257 671 aaPredicted RBP31.37■■■□□ 2.61
TRAF4-203ENST00000394925 DHX57Q6P158 1386 aaKnown RBP31.37■■■□□ 2.61
TRAF4-203ENST00000394925 USP32Q8NFA0 1604 aa31.36■■■□□ 2.61
TRAF4-203ENST00000394925 GLI3P10071 1580 aa31.36■■■□□ 2.61
TRAF4-203ENST00000394925 PLEKHG5O94827 1062 aa31.36■■■□□ 2.61
TRAF4-203ENST00000394925 SAFB2Q14151 953 aaKnown RBP eCLIP31.36■■■□□ 2.61
TRAF4-203ENST00000394925 PSME1Q06323 249 aa31.35■■■□□ 2.61
TRAF4-203ENST00000394925 TNS3Q68CZ2 1445 aa31.34■■■□□ 2.61
TRAF4-203ENST00000394925 CABLES1Q8TDN4 633 aa31.34■■■□□ 2.61
TRAF4-203ENST00000394925 PRAM1Q96QH2 718 aa31.33■■■□□ 2.61
TRAF4-203ENST00000394925 NRXN1Q9ULB1 1477 aa31.33■■■□□ 2.61
TRAF4-203ENST00000394925 LMOD2Q6P5Q4 547 aa31.31■■■□□ 2.6
TRAF4-203ENST00000394925 BRWD3Q6RI45 1802 aa31.28■■■□□ 2.6
TRAF4-203ENST00000394925 ACIN1Q9UKV3 1341 aaKnown RBP31.27■■■□□ 2.6
TRAF4-203ENST00000394925 POGKQ9P215 609 aa31.27■■■□□ 2.6
TRAF4-203ENST00000394925 SBNO1A3KN83 1393 aa31.27■■■□□ 2.6
TRAF4-203ENST00000394925 VPS72Q15906 364 aa31.26■■■□□ 2.59
TRAF4-203ENST00000394925 PMFBP1Q8TBY8 1022 aa31.26■■■□□ 2.59
TRAF4-203ENST00000394925 BLMP54132 1417 aaPredicted RBP31.25■■■□□ 2.59
TRAF4-203ENST00000394925 SEPT12Q8IYM1 358 aa31.25■■■□□ 2.59
TRAF4-203ENST00000394925 CCDC9Q9Y3X0 531 aaKnown RBP31.25■■■□□ 2.59
TRAF4-203ENST00000394925 PLCH1Q4KWH8 1693 aa31.24■■■□□ 2.59
TRAF4-203ENST00000394925 ARHGEF10O15013 1369 aa31.23■■■□□ 2.59
TRAF4-203ENST00000394925 ABCA3Q99758 1704 aa31.22■■■□□ 2.59
TRAF4-203ENST00000394925 NWD2Q9ULI1 1742 aa31.21■■■□□ 2.59
TRAF4-203ENST00000394925 DLC1Q96QB1 1528 aa31.21■■■□□ 2.59
TRAF4-203ENST00000394925 DEFB132Q7Z7B7 95 aa31.2■■■□□ 2.59
TRAF4-203ENST00000394925 ANKARQ7Z5J8 1434 aa31.2■■■□□ 2.59
TRAF4-203ENST00000394925 FAM83GA6ND36 823 aa31.18■■■□□ 2.58
TRAF4-203ENST00000394925 SF3B2Q13435 895 aaKnown RBP31.18■■■□□ 2.58
TRAF4-203ENST00000394925 HIRIP3Q9BW71 556 aaPredicted RBP31.18■■■□□ 2.58
TRAF4-203ENST00000394925 TRAK1Q9UPV9 953 aa31.18■■■□□ 2.58
TRAF4-203ENST00000394925 ONECUT3O60422 494 aaPredicted RBP31.17■■■□□ 2.58
TRAF4-203ENST00000394925 ADGRB2O60241 1585 aa31.15■■■□□ 2.58
TRAF4-203ENST00000394925 RAB3GAP2Q9H2M9 1393 aa31.15■■■□□ 2.58
TRAF4-203ENST00000394925 ADGRB1O14514 1584 aa31.14■■■□□ 2.58
TRAF4-203ENST00000394925 KRT27Q7Z3Y8 459 aa31.14■■■□□ 2.58
TRAF4-203ENST00000394925 MINK1Q8N4C8 1332 aaPredicted RBP31.14■■■□□ 2.58
TRAF4-203ENST00000394925 KDM2AQ9Y2K7 1162 aa31.13■■■□□ 2.57
TRAF4-203ENST00000394925 A0A0G2JS52 829 aa31.12■■■□□ 2.57
TRAF4-203ENST00000394925 MYT1Q01538 1121 aa31.12■■■□□ 2.57
TRAF4-203ENST00000394925 TRPM3Q9HCF6 1732 aaPredicted RBP31.11■■■□□ 2.57
TRAF4-203ENST00000394925 GPRASP1Q5JY77 1395 aa31.1■■■□□ 2.57
TRAF4-203ENST00000394925 PRR36Q9H6K5 1346 aa31.09■■■□□ 2.57
TRAF4-203ENST00000394925 BTG4Q9NY30 223 aa31.09■■■□□ 2.57
TRAF4-203ENST00000394925 DCAF11Q8TEB1 546 aa31.08■■■□□ 2.57
TRAF4-203ENST00000394925 NRAPQ86VF7 1730 aa31.07■■■□□ 2.56
TRAF4-203ENST00000394925 EIF3AQ14152 1382 aaKnown RBP31.07■■■□□ 2.56
TRAF4-203ENST00000394925 FAM98CQ17RN3 349 aaKnown RBP31.07■■■□□ 2.56
TRAF4-203ENST00000394925 ALS2Q96Q42 1657 aa31.06■■■□□ 2.56
TRAF4-203ENST00000394925 WASLO00401 505 aaPredicted RBP31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms