RNA–Protein interactions for RNA: ENST00000394830.7

PBRM1-204, Transcript of polybromo 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PBRM1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-204ENST00000394830 CD109Q6YHK3 1445 aa17.48■□□□□ 0.39
PBRM1-204ENST00000394830 BLMP54132 1417 aaPredicted RBP17.48■□□□□ 0.39
PBRM1-204ENST00000394830 TRIM44Q96DX7 344 aaPredicted RBP17.48■□□□□ 0.39
PBRM1-204ENST00000394830 PDZRN3Q9UPQ7 1066 aa17.48■□□□□ 0.39
PBRM1-204ENST00000394830 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
PBRM1-204ENST00000394830 C14orf37Q86TY3 774 aa17.47■□□□□ 0.39
PBRM1-204ENST00000394830 COG3Q96JB2 828 aa17.47■□□□□ 0.39
PBRM1-204ENST00000394830 RAPGEF3O95398 923 aa17.47■□□□□ 0.39
PBRM1-204ENST00000394830 CDC42BPAQ5VT25 1732 aa17.47■□□□□ 0.39
PBRM1-204ENST00000394830 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
PBRM1-204ENST00000394830 PRAM1Q96QH2 718 aa17.47■□□□□ 0.39
PBRM1-204ENST00000394830 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
PBRM1-204ENST00000394830 SOX12O15370 315 aa17.46■□□□□ 0.39
PBRM1-204ENST00000394830 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
PBRM1-204ENST00000394830 RARSP54136 660 aaKnown RBP17.46■□□□□ 0.39
PBRM1-204ENST00000394830 BCORL1Q5H9F3 1711 aa17.45■□□□□ 0.38
PBRM1-204ENST00000394830 PREX2Q70Z35 1606 aa17.45■□□□□ 0.38
PBRM1-204ENST00000394830 GBP4Q96PP9 640 aa17.45■□□□□ 0.38
PBRM1-204ENST00000394830 ELL2O00472 640 aaPredicted RBP17.44■□□□□ 0.38
PBRM1-204ENST00000394830 MVPQ14764 893 aaKnown RBP17.44■□□□□ 0.38
PBRM1-204ENST00000394830 ZMYM4Q5VZL5 1548 aa17.44■□□□□ 0.38
PBRM1-204ENST00000394830 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
PBRM1-204ENST00000394830 GNAI1P63096 354 aa17.43■□□□□ 0.38
PBRM1-204ENST00000394830 CROCC2H7BZ55 1655 aa17.43■□□□□ 0.38
PBRM1-204ENST00000394830 ANKRD45Q5TZF3 282 aa17.43■□□□□ 0.38
PBRM1-204ENST00000394830 POLR3AO14802 1390 aaPredicted RBP17.43■□□□□ 0.38
PBRM1-204ENST00000394830 PLA2R1Q13018 1463 aa17.43■□□□□ 0.38
PBRM1-204ENST00000394830 NSD2O96028 1365 aa17.42■□□□□ 0.38
PBRM1-204ENST00000394830 PTMSP20962 102 aa17.42■□□□□ 0.38
PBRM1-204ENST00000394830 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.41■□□□□ 0.38
PBRM1-204ENST00000394830 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
PBRM1-204ENST00000394830 NCLP19338 710 aaKnown RBP17.41■□□□□ 0.38
PBRM1-204ENST00000394830 CARD14Q9BXL6 1004 aa17.41■□□□□ 0.38
PBRM1-204ENST00000394830 C22orf23Q9BZE7 217 aa17.4■□□□□ 0.38
PBRM1-204ENST00000394830 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
PBRM1-204ENST00000394830 TMPOP42166 694 aaKnown RBP17.4■□□□□ 0.38
PBRM1-204ENST00000394830 ATF7IPQ6VMQ6 1270 aa17.4■□□□□ 0.38
PBRM1-204ENST00000394830 MYO5CQ9NQX4 1742 aa17.4■□□□□ 0.38
PBRM1-204ENST00000394830 CDK19Q9BWU1 502 aa17.4■□□□□ 0.38
PBRM1-204ENST00000394830 PRKAR2BP31323 418 aa17.39■□□□□ 0.37
PBRM1-204ENST00000394830 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
PBRM1-204ENST00000394830 HMOX1P09601 288 aa17.39■□□□□ 0.37
PBRM1-204ENST00000394830 ZNF518AQ6AHZ1 1483 aa17.39■□□□□ 0.37
PBRM1-204ENST00000394830 GOLGA6L3A6NEY3 463 aa17.39■□□□□ 0.37
PBRM1-204ENST00000394830 CABP1Q9NZU7 370 aa17.39■□□□□ 0.37
PBRM1-204ENST00000394830 HMMRO75330 724 aa17.38■□□□□ 0.37
PBRM1-204ENST00000394830 FAM69CQ0P6D2 419 aa17.38■□□□□ 0.37
PBRM1-204ENST00000394830 TTC37Q6PGP7 1564 aa17.38■□□□□ 0.37
PBRM1-204ENST00000394830 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
PBRM1-204ENST00000394830 APBB1O00213 710 aa17.38■□□□□ 0.37
PBRM1-204ENST00000394830 ZBTB7CA1YPR0 619 aa17.38■□□□□ 0.37
PBRM1-204ENST00000394830 ATP10AO60312 1499 aa17.38■□□□□ 0.37
PBRM1-204ENST00000394830 IDI1Q13907 227 aa17.38■□□□□ 0.37
PBRM1-204ENST00000394830 LNPKQ9C0E8 428 aa17.38■□□□□ 0.37
PBRM1-204ENST00000394830 PUS7Q96PZ0 661 aaKnown RBP17.37■□□□□ 0.37
PBRM1-204ENST00000394830 PRDM15P57071 1507 aaPredicted RBP17.37■□□□□ 0.37
PBRM1-204ENST00000394830 FRAT2O75474 233 aaPredicted RBP17.37■□□□□ 0.37
PBRM1-204ENST00000394830 NOB1Q9ULX3 412 aaKnown RBP17.37■□□□□ 0.37
PBRM1-204ENST00000394830 ATP7AQ04656 1500 aa17.36■□□□□ 0.37
PBRM1-204ENST00000394830 ABCC11Q96J66 1382 aa17.36■□□□□ 0.37
PBRM1-204ENST00000394830 DDX11L8A8MPP1 907 aa17.36■□□□□ 0.37
PBRM1-204ENST00000394830 STK31Q9BXU1 1019 aa17.36■□□□□ 0.37
PBRM1-204ENST00000394830 FCHSD2O94868 740 aa17.35■□□□□ 0.37
PBRM1-204ENST00000394830 MAGI2Q86UL8 1455 aa17.35■□□□□ 0.37
PBRM1-204ENST00000394830 IGHDP01880 384 aa17.35■□□□□ 0.37
PBRM1-204ENST00000394830 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
PBRM1-204ENST00000394830 MCCP23508 829 aa17.34■□□□□ 0.37
PBRM1-204ENST00000394830 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
PBRM1-204ENST00000394830 EID1Q9Y6B2 187 aa17.34■□□□□ 0.37
PBRM1-204ENST00000394830 UHRF1BP1LA0JNW5 1464 aa17.34■□□□□ 0.37
PBRM1-204ENST00000394830 ANKRD36BQ8N2N9 1353 aa17.33■□□□□ 0.37
PBRM1-204ENST00000394830 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
PBRM1-204ENST00000394830 PLXNC1O60486 1568 aa17.33■□□□□ 0.36
PBRM1-204ENST00000394830 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
PBRM1-204ENST00000394830 KDM2BQ8NHM5 1336 aa17.32■□□□□ 0.36
PBRM1-204ENST00000394830 NGDNQ8NEJ9 315 aaKnown RBP17.32■□□□□ 0.36
PBRM1-204ENST00000394830 C8orf34Q49A92 452 aa17.31■□□□□ 0.36
PBRM1-204ENST00000394830 SSH1Q8WYL5 1049 aa17.31■□□□□ 0.36
PBRM1-204ENST00000394830 ABCC1P33527 1531 aa17.31■□□□□ 0.36
PBRM1-204ENST00000394830 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
PBRM1-204ENST00000394830 AMPHP49418 695 aa17.31■□□□□ 0.36
PBRM1-204ENST00000394830 TRPM1Q7Z4N2 1603 aa17.31■□□□□ 0.36
PBRM1-204ENST00000394830 SLC4A10Q6U841 1118 aa17.3■□□□□ 0.36
PBRM1-204ENST00000394830 UNC13BO14795 1591 aa17.3■□□□□ 0.36
PBRM1-204ENST00000394830 TRPM2O94759 1503 aa17.3■□□□□ 0.36
PBRM1-204ENST00000394830 POLR1AO95602 1720 aaPredicted RBP17.3■□□□□ 0.36
PBRM1-204ENST00000394830 PTPRTO14522 1441 aa17.3■□□□□ 0.36
PBRM1-204ENST00000394830 GCC1Q96CN9 775 aa17.29■□□□□ 0.36
PBRM1-204ENST00000394830 SBNO2Q9Y2G9 1366 aa17.29■□□□□ 0.36
PBRM1-204ENST00000394830 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
PBRM1-204ENST00000394830 TWISTNBQ3B726 338 aaPredicted RBP17.28■□□□□ 0.36
PBRM1-204ENST00000394830 TMEM57Q8N5G2 664 aa17.28■□□□□ 0.36
PBRM1-204ENST00000394830 PLEKHG5O94827 1062 aa17.27■□□□□ 0.36
PBRM1-204ENST00000394830 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
PBRM1-204ENST00000394830 IL16Q14005 1332 aa17.27■□□□□ 0.36
PBRM1-204ENST00000394830 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.36
PBRM1-204ENST00000394830 ALDH1L2Q3SY69 923 aa17.27■□□□□ 0.35
PBRM1-204ENST00000394830 ZNF521Q96K83 1311 aa17.27■□□□□ 0.35
PBRM1-204ENST00000394830 OS9Q13438 667 aaPredicted RBP17.26■□□□□ 0.35
PBRM1-204ENST00000394830 ST18O60284 1047 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms