RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ASXL1Q8IXJ9 1541 aa17.74■□□□□ 0.43
GTF2F1-201ENST00000394456 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
GTF2F1-201ENST00000394456 TCERG1O14776 1098 aaKnown RBP17.74■□□□□ 0.43
GTF2F1-201ENST00000394456 SLC52A1Q9NWF4 448 aa17.74■□□□□ 0.43
GTF2F1-201ENST00000394456 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
GTF2F1-201ENST00000394456 BACH2Q9BYV9 841 aa17.74■□□□□ 0.43
GTF2F1-201ENST00000394456 DEKP35659 375 aaKnown RBP17.73■□□□□ 0.43
GTF2F1-201ENST00000394456 CLTCQ00610 1675 aaKnown RBP17.73■□□□□ 0.43
GTF2F1-201ENST00000394456 TMEM131LA2VDJ0 1609 aa17.72■□□□□ 0.43
GTF2F1-201ENST00000394456 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
GTF2F1-201ENST00000394456 SBNO2Q9Y2G9 1366 aa17.71■□□□□ 0.43
GTF2F1-201ENST00000394456 INSRP06213 1382 aa17.7■□□□□ 0.42
GTF2F1-201ENST00000394456 SLC24A1O60721 1099 aa17.7■□□□□ 0.42
GTF2F1-201ENST00000394456 BCAR3O75815 825 aa17.7■□□□□ 0.42
GTF2F1-201ENST00000394456 SAFB2Q14151 953 aaKnown RBP eCLIP17.7■□□□□ 0.42
GTF2F1-201ENST00000394456 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
GTF2F1-201ENST00000394456 ARHGEF28Q8N1W1 1705 aaKnown RBP17.69■□□□□ 0.42
GTF2F1-201ENST00000394456 SLFN5Q08AF3 891 aa17.69■□□□□ 0.42
GTF2F1-201ENST00000394456 STK26Q9P289 416 aa17.69■□□□□ 0.42
GTF2F1-201ENST00000394456 REREQ9P2R6 1566 aa17.68■□□□□ 0.42
GTF2F1-201ENST00000394456 AGLP35573 1532 aa17.68■□□□□ 0.42
GTF2F1-201ENST00000394456 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
GTF2F1-201ENST00000394456 SLC12A5Q9H2X9 1139 aa17.67■□□□□ 0.42
GTF2F1-201ENST00000394456 KDM2BQ8NHM5 1336 aa17.66■□□□□ 0.42
GTF2F1-201ENST00000394456 ARHGEF40Q8TER5 1519 aa17.65■□□□□ 0.42
GTF2F1-201ENST00000394456 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
GTF2F1-201ENST00000394456 RRP7AQ9Y3A4 280 aaKnown RBP17.65■□□□□ 0.42
GTF2F1-201ENST00000394456 SLC4A3P48751 1232 aa17.63■□□□□ 0.41
GTF2F1-201ENST00000394456 ZFYVE9O95405 1425 aa17.63■□□□□ 0.41
GTF2F1-201ENST00000394456 NPC1L1Q9UHC9 1359 aa17.63■□□□□ 0.41
GTF2F1-201ENST00000394456 MS4A1P11836 297 aa17.63■□□□□ 0.41
GTF2F1-201ENST00000394456 TRMT2AQ8IZ69 625 aaKnown RBP17.63■□□□□ 0.41
GTF2F1-201ENST00000394456 TULP4Q9NRJ4 1543 aa17.62■□□□□ 0.41
GTF2F1-201ENST00000394456 NSD3Q9BZ95 1437 aa17.62■□□□□ 0.41
GTF2F1-201ENST00000394456 RGS3P49796 1198 aa17.62■□□□□ 0.41
GTF2F1-201ENST00000394456 CABP2Q9NPB3 220 aa17.61■□□□□ 0.41
GTF2F1-201ENST00000394456 EVC2Q86UK5 1308 aa17.6■□□□□ 0.41
GTF2F1-201ENST00000394456 PPP6R1Q9UPN7 881 aa17.6■□□□□ 0.41
GTF2F1-201ENST00000394456 SPATA31D1Q6ZQQ2 1576 aa17.59■□□□□ 0.41
GTF2F1-201ENST00000394456 ESF1Q9H501 851 aaKnown RBP17.58■□□□□ 0.41
GTF2F1-201ENST00000394456 TNNQ9UQP3 1299 aa17.58■□□□□ 0.4
GTF2F1-201ENST00000394456 MINK1Q8N4C8 1332 aaPredicted RBP17.57■□□□□ 0.4
GTF2F1-201ENST00000394456 ALKQ9UM73 1620 aa17.57■□□□□ 0.4
GTF2F1-201ENST00000394456 MORC1Q86VD1 984 aa17.57■□□□□ 0.4
GTF2F1-201ENST00000394456 PRAM1Q96QH2 718 aa17.57■□□□□ 0.4
GTF2F1-201ENST00000394456 A2ML1A8K2U0 1454 aa17.57■□□□□ 0.4
GTF2F1-201ENST00000394456 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
GTF2F1-201ENST00000394456 PANK1Q8TE04 598 aa17.56■□□□□ 0.4
GTF2F1-201ENST00000394456 IGHDP01880 384 aa17.56■□□□□ 0.4
GTF2F1-201ENST00000394456 PTPRMP28827 1452 aa17.56■□□□□ 0.4
GTF2F1-201ENST00000394456 CENPQQ7L2Z9 268 aaPredicted RBP17.56■□□□□ 0.4
GTF2F1-201ENST00000394456 WWC1Q8IX03 1113 aa17.56■□□□□ 0.4
GTF2F1-201ENST00000394456 SRPK2P78362 688 aaKnown RBP17.55■□□□□ 0.4
GTF2F1-201ENST00000394456 POGKQ9P215 609 aa17.55■□□□□ 0.4
GTF2F1-201ENST00000394456 NKTRP30414 1462 aaKnown RBP17.55■□□□□ 0.4
GTF2F1-201ENST00000394456 ZMYM3Q14202 1370 aa17.55■□□□□ 0.4
GTF2F1-201ENST00000394456 C8orf34Q49A92 452 aa17.54■□□□□ 0.4
GTF2F1-201ENST00000394456 BCL2L13Q9BXK5 485 aa17.54■□□□□ 0.4
GTF2F1-201ENST00000394456 RIMS2Q9UQ26 1411 aa17.54■□□□□ 0.4
GTF2F1-201ENST00000394456 E9PSI1 815 aa17.53■□□□□ 0.4
GTF2F1-201ENST00000394456 COG6Q9Y2V7 657 aa17.53■□□□□ 0.4
GTF2F1-201ENST00000394456 MTHFSP49914 203 aa17.52■□□□□ 0.4
GTF2F1-201ENST00000394456 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.52■□□□□ 0.4
GTF2F1-201ENST00000394456 FRAT1Q92837 279 aaPredicted RBP17.52■□□□□ 0.4
GTF2F1-201ENST00000394456 RTL5Q5HYW3 569 aaPredicted RBP17.52■□□□□ 0.39
GTF2F1-201ENST00000394456 NEFMP07197 916 aa17.51■□□□□ 0.39
GTF2F1-201ENST00000394456 TCP11L2Q8N4U5 519 aa17.51■□□□□ 0.39
GTF2F1-201ENST00000394456 CGNL1Q0VF96 1302 aa17.51■□□□□ 0.39
GTF2F1-201ENST00000394456 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
GTF2F1-201ENST00000394456 POLR3AO14802 1390 aaPredicted RBP17.49■□□□□ 0.39
GTF2F1-201ENST00000394456 USP32Q8NFA0 1604 aa17.49■□□□□ 0.39
GTF2F1-201ENST00000394456 WAPLQ7Z5K2 1190 aa17.49■□□□□ 0.39
GTF2F1-201ENST00000394456 PUS7Q96PZ0 661 aaKnown RBP17.48■□□□□ 0.39
GTF2F1-201ENST00000394456 A0A1W2PP64 1363 aa17.48■□□□□ 0.39
GTF2F1-201ENST00000394456 SETD1AO15047 1707 aaKnown RBP17.48■□□□□ 0.39
GTF2F1-201ENST00000394456 RLBP1P12271 317 aa17.48■□□□□ 0.39
GTF2F1-201ENST00000394456 CANXP27824 592 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-201ENST00000394456 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
GTF2F1-201ENST00000394456 SHPRHQ149N8 1683 aa17.46■□□□□ 0.39
GTF2F1-201ENST00000394456 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
GTF2F1-201ENST00000394456 CLUAP1Q96AJ1 413 aa17.46■□□□□ 0.39
GTF2F1-201ENST00000394456 CDK19Q9BWU1 502 aa17.45■□□□□ 0.38
GTF2F1-201ENST00000394456 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
GTF2F1-201ENST00000394456 RUNDC1Q96C34 613 aa17.45■□□□□ 0.38
GTF2F1-201ENST00000394456 TNRQ92752 1358 aa17.45■□□□□ 0.38
GTF2F1-201ENST00000394456 SEC24BO95487 1268 aa17.44■□□□□ 0.38
GTF2F1-201ENST00000394456 CEBPAP49715 358 aaPredicted RBP17.43■□□□□ 0.38
GTF2F1-201ENST00000394456 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
GTF2F1-201ENST00000394456 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
GTF2F1-201ENST00000394456 ATAD2Q6PL18 1390 aa17.43■□□□□ 0.38
GTF2F1-201ENST00000394456 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
GTF2F1-201ENST00000394456 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
GTF2F1-201ENST00000394456 METP08581 1390 aa17.42■□□□□ 0.38
GTF2F1-201ENST00000394456 CD163L1Q9NR16 1453 aa17.41■□□□□ 0.38
GTF2F1-201ENST00000394456 CABP1Q9NZU7 370 aa17.41■□□□□ 0.38
GTF2F1-201ENST00000394456 PCDHB15Q9Y5E8 787 aa17.41■□□□□ 0.38
GTF2F1-201ENST00000394456 ABCC11Q96J66 1382 aa17.41■□□□□ 0.38
GTF2F1-201ENST00000394456 TSR2Q969E8 191 aaKnown RBP17.41■□□□□ 0.38
GTF2F1-201ENST00000394456 IQSEC2Q5JU85 1478 aa17.4■□□□□ 0.38
GTF2F1-201ENST00000394456 UBR1Q8IWV7 1749 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms