RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ANKRD18BA2A2Z9 1011 aa15.99■□□□□ 0.15
USP49-203ENST00000394253 STIM1Q13586 685 aa15.99■□□□□ 0.15
USP49-203ENST00000394253 TSPY26PQ9H489 355 aa15.98■□□□□ 0.15
USP49-203ENST00000394253 CFAP45Q9UL16 551 aa15.98■□□□□ 0.15
USP49-203ENST00000394253 INTS3Q68E01 1043 aaKnown RBP15.98■□□□□ 0.15
USP49-203ENST00000394253 ERICH4A6NGS2 130 aa15.98■□□□□ 0.15
USP49-203ENST00000394253 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
USP49-203ENST00000394253 TICAM2Q86XR7 235 aa15.98■□□□□ 0.15
USP49-203ENST00000394253 GBP3Q9H0R5 595 aa15.98■□□□□ 0.15
USP49-203ENST00000394253 NINLQ9Y2I6 1382 aa15.97■□□□□ 0.15
USP49-203ENST00000394253 HSP90AB4PQ58FF6 505 aa15.97■□□□□ 0.15
USP49-203ENST00000394253 CRACR2AQ9BSW2 395 aa15.97■□□□□ 0.15
USP49-203ENST00000394253 UQCRHLA0A096LP55 91 aa15.96■□□□□ 0.15
USP49-203ENST00000394253 UQCRHP07919 91 aa15.96■□□□□ 0.15
USP49-203ENST00000394253 RAD21O60216 631 aa15.96■□□□□ 0.15
USP49-203ENST00000394253 PPFIBP1Q86W92 1011 aa15.96■□□□□ 0.15
USP49-203ENST00000394253 VPS37DQ86XT2 251 aa15.96■□□□□ 0.15
USP49-203ENST00000394253 CCDC102AQ96A19 550 aa15.96■□□□□ 0.15
USP49-203ENST00000394253 DAAM2Q86T65 1068 aa15.96■□□□□ 0.15
USP49-203ENST00000394253 CSB-PGBD3P0DP91 1061 aa15.96■□□□□ 0.14
USP49-203ENST00000394253 FAM114A1Q8IWE2 563 aa15.95■□□□□ 0.14
USP49-203ENST00000394253 GPATCH11Q8N954 259 aa15.95■□□□□ 0.14
USP49-203ENST00000394253 DACH1Q9UI36 760 aa15.95■□□□□ 0.14
USP49-203ENST00000394253 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
USP49-203ENST00000394253 FYB1O15117 783 aa15.95■□□□□ 0.14
USP49-203ENST00000394253 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.95■□□□□ 0.14
USP49-203ENST00000394253 V9GYY5 206 aaPredicted RBP15.95■□□□□ 0.14
USP49-203ENST00000394253 MYO10Q9HD67 2058 aa15.95■□□□□ 0.14
USP49-203ENST00000394253 GRIPAP1Q4V328 841 aa15.95■□□□□ 0.14
USP49-203ENST00000394253 RALYLQ86SE5 291 aaKnown RBP15.95■□□□□ 0.14
USP49-203ENST00000394253 CCDC97Q96F63 343 aaPredicted RBP15.95■□□□□ 0.14
USP49-203ENST00000394253 KIF2AO00139 706 aaPredicted RBP15.95■□□□□ 0.14
USP49-203ENST00000394253 CDK5RAP3Q96JB5 506 aa15.95■□□□□ 0.14
USP49-203ENST00000394253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.94■□□□□ 0.14
USP49-203ENST00000394253 PSMA5P28066 241 aa15.94■□□□□ 0.14
USP49-203ENST00000394253 TERF2IPQ9NYB0 399 aa15.94■□□□□ 0.14
USP49-203ENST00000394253 LRRFIP2Q9Y608 721 aaKnown RBP15.94■□□□□ 0.14
USP49-203ENST00000394253 CCDC192P0DO97 292 aa15.94■□□□□ 0.14
USP49-203ENST00000394253 JMYQ8N9B5 988 aa15.94■□□□□ 0.14
USP49-203ENST00000394253 TRIM21P19474 475 aaKnown RBP15.93■□□□□ 0.14
USP49-203ENST00000394253 CWC22Q9HCG8 908 aaKnown RBP15.93■□□□□ 0.14
USP49-203ENST00000394253 PAK3O75914 559 aaPredicted RBP15.93■□□□□ 0.14
USP49-203ENST00000394253 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
USP49-203ENST00000394253 AEBP1Q8IUX7 1158 aa15.93■□□□□ 0.14
USP49-203ENST00000394253 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
USP49-203ENST00000394253 SETSIPP0DME0 302 aa15.93■□□□□ 0.14
USP49-203ENST00000394253 ZWINTO95229 277 aa15.92■□□□□ 0.14
USP49-203ENST00000394253 JAKMIP3Q5VZ66 844 aa15.92■□□□□ 0.14
USP49-203ENST00000394253 CBFA2T2O43439 604 aa15.92■□□□□ 0.14
USP49-203ENST00000394253 FAM193AP78312 1265 aa15.92■□□□□ 0.14
USP49-203ENST00000394253 RBM10P98175 930 aaKnown RBP15.92■□□□□ 0.14
USP49-203ENST00000394253 MCM2P49736 904 aa15.92■□□□□ 0.14
USP49-203ENST00000394253 WDR66Q8TBY9 1149 aa15.92■□□□□ 0.14
USP49-203ENST00000394253 CLUAP1Q96AJ1 413 aa15.92■□□□□ 0.14
USP49-203ENST00000394253 NLRP13Q86W25 1043 aa15.92■□□□□ 0.14
USP49-203ENST00000394253 CCNB3Q8WWL7 1395 aa15.92■□□□□ 0.14
USP49-203ENST00000394253 ERC2O15083 957 aa15.91■□□□□ 0.14
USP49-203ENST00000394253 CLGNO14967 610 aa15.91■□□□□ 0.14
USP49-203ENST00000394253 SSR1P43307 286 aaKnown RBP15.91■□□□□ 0.14
USP49-203ENST00000394253 DDX19BQ9UMR2 479 aa15.91■□□□□ 0.14
USP49-203ENST00000394253 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
USP49-203ENST00000394253 AAMPQ13685 434 aa15.91■□□□□ 0.14
USP49-203ENST00000394253 KIF15Q9NS87 1388 aa15.91■□□□□ 0.14
USP49-203ENST00000394253 GCOM1H8Y6P7 765 aaPredicted RBP15.91■□□□□ 0.14
USP49-203ENST00000394253 IFIT2P09913 472 aaKnown RBP15.91■□□□□ 0.14
USP49-203ENST00000394253 MYZAPP0CAP1 466 aa15.91■□□□□ 0.14
USP49-203ENST00000394253 ZNF396Q96N95 335 aaPredicted RBP15.9■□□□□ 0.14
USP49-203ENST00000394253 C9orf78Q9NZ63 289 aaPredicted RBP15.9■□□□□ 0.14
USP49-203ENST00000394253 SART3Q15020 963 aaKnown RBP15.9■□□□□ 0.14
USP49-203ENST00000394253 C6orf163Q5TEZ5 329 aa15.9■□□□□ 0.14
USP49-203ENST00000394253 KIAA1328Q86T90 577 aa15.9■□□□□ 0.14
USP49-203ENST00000394253 SMC1AQ14683 1233 aaKnown RBP15.9■□□□□ 0.14
USP49-203ENST00000394253 SERPINC1P01008 464 aa15.9■□□□□ 0.14
USP49-203ENST00000394253 ZKSCAN2Q63HK3 967 aa15.89■□□□□ 0.13
USP49-203ENST00000394253 GIGYF2Q6Y7W6 1299 aaKnown RBP15.89■□□□□ 0.13
USP49-203ENST00000394253 CCDC148Q8NFR7 591 aa15.89■□□□□ 0.13
USP49-203ENST00000394253 PRKCSHP14314 528 aaPredicted RBP15.89■□□□□ 0.13
USP49-203ENST00000394253 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
USP49-203ENST00000394253 IPO4Q8TEX9 1081 aaKnown RBP15.89■□□□□ 0.13
USP49-203ENST00000394253 BMS1Q14692 1282 aaKnown RBP15.88■□□□□ 0.13
USP49-203ENST00000394253 TMEM132AQ24JP5 1023 aa15.88■□□□□ 0.13
USP49-203ENST00000394253 SWAP70Q9UH65 585 aa15.88■□□□□ 0.13
USP49-203ENST00000394253 NFKBIBQ15653 356 aa15.88■□□□□ 0.13
USP49-203ENST00000394253 DHX37Q8IY37 1157 aaKnown RBP15.88■□□□□ 0.13
USP49-203ENST00000394253 SPECC1LQ69YQ0 1117 aa15.88■□□□□ 0.13
USP49-203ENST00000394253 BRPF1P55201 1214 aaPredicted RBP15.87■□□□□ 0.13
USP49-203ENST00000394253 TRAK2O60296 914 aa15.87■□□□□ 0.13
USP49-203ENST00000394253 IMMTQ16891 758 aaKnown RBP15.87■□□□□ 0.13
USP49-203ENST00000394253 DZIP1LQ8IYY4 767 aaKnown RBP15.87■□□□□ 0.13
USP49-203ENST00000394253 ABCC9O60706 1549 aa15.87■□□□□ 0.13
USP49-203ENST00000394253 E9PSI1 815 aa15.87■□□□□ 0.13
USP49-203ENST00000394253 KIF3CO14782 793 aa15.87■□□□□ 0.13
USP49-203ENST00000394253 CETN2P41208 172 aa15.87■□□□□ 0.13
USP49-203ENST00000394253 UBXN4Q92575 508 aa15.86■□□□□ 0.13
USP49-203ENST00000394253 SLC4A3P48751 1232 aa15.86■□□□□ 0.13
USP49-203ENST00000394253 DNAJC2Q99543 621 aaKnown RBP15.86■□□□□ 0.13
USP49-203ENST00000394253 ANAPC15P60006 121 aa15.86■□□□□ 0.13
USP49-203ENST00000394253 DDX46Q7L014 1031 aaKnown RBP15.86■□□□□ 0.13
USP49-203ENST00000394253 SPC24Q8NBT2 197 aa15.86■□□□□ 0.13
USP49-203ENST00000394253 RNF214Q8ND24 703 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms