RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 METP08581 1390 aa23.57■■□□□ 1.36
TGFA-202ENST00000394241 EP400Q96L91 3159 aa23.56■■□□□ 1.36
TGFA-202ENST00000394241 ZNF326Q5BKZ1 582 aaKnown RBP23.55■■□□□ 1.36
TGFA-202ENST00000394241 PTCH1Q13635 1447 aa23.55■■□□□ 1.36
TGFA-202ENST00000394241 C1orf167Q5SNV9 1468 aa23.55■■□□□ 1.36
TGFA-202ENST00000394241 ATRNO75882 1429 aa23.54■■□□□ 1.36
TGFA-202ENST00000394241 SPATA31E1Q6ZUB1 1445 aa23.54■■□□□ 1.36
TGFA-202ENST00000394241 CCDC125Q86Z20 511 aa23.54■■□□□ 1.36
TGFA-202ENST00000394241 FNBP4Q8N3X1 1017 aaPredicted RBP23.54■■□□□ 1.36
TGFA-202ENST00000394241 NEXMIFQ5QGS0 1516 aa23.54■■□□□ 1.36
TGFA-202ENST00000394241 SOS2Q07890 1332 aaPredicted RBP23.53■■□□□ 1.36
TGFA-202ENST00000394241 PPLO60437 1756 aa23.5■■□□□ 1.35
TGFA-202ENST00000394241 COL22A1Q8NFW1 1626 aaPredicted RBP23.49■■□□□ 1.35
TGFA-202ENST00000394241 IFT172Q9UG01 1749 aa23.49■■□□□ 1.35
TGFA-202ENST00000394241 ORAI2Q96SN7 254 aa23.47■■□□□ 1.35
TGFA-202ENST00000394241 RPGRIP1LQ68CZ1 1315 aa23.47■■□□□ 1.35
TGFA-202ENST00000394241 RGL3Q3MIN7 710 aa23.45■■□□□ 1.34
TGFA-202ENST00000394241 MARF1Q9Y4F3 1742 aaKnown RBP23.44■■□□□ 1.34
TGFA-202ENST00000394241 BCL9LQ86UU0 1499 aa23.43■■□□□ 1.34
TGFA-202ENST00000394241 MYOM2P54296 1465 aa23.43■■□□□ 1.34
TGFA-202ENST00000394241 GJD4Q96KN9 370 aaPredicted RBP23.4■■□□□ 1.34
TGFA-202ENST00000394241 VGFO15240 615 aaPredicted RBP23.39■■□□□ 1.33
TGFA-202ENST00000394241 BLMP54132 1417 aaPredicted RBP23.39■■□□□ 1.33
TGFA-202ENST00000394241 ROBO2Q9HCK4 1378 aa23.38■■□□□ 1.33
TGFA-202ENST00000394241 SIN3AQ96ST3 1273 aa23.37■■□□□ 1.33
TGFA-202ENST00000394241 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.36■■□□□ 1.33
TGFA-202ENST00000394241 LRP5O75197 1615 aa23.36■■□□□ 1.33
TGFA-202ENST00000394241 NPHP3Q7Z494 1330 aa23.34■■□□□ 1.33
TGFA-202ENST00000394241 NEUROD1Q13562 356 aa23.34■■□□□ 1.33
TGFA-202ENST00000394241 CLSPNQ9HAW4 1339 aa23.33■■□□□ 1.33
TGFA-202ENST00000394241 PXDNQ92626 1479 aa23.33■■□□□ 1.33
TGFA-202ENST00000394241 BRWD3Q6RI45 1802 aa23.33■■□□□ 1.32
TGFA-202ENST00000394241 GLI3P10071 1580 aa23.32■■□□□ 1.32
TGFA-202ENST00000394241 NRXN1Q9ULB1 1477 aa23.32■■□□□ 1.32
TGFA-202ENST00000394241 DEFB132Q7Z7B7 95 aa23.32■■□□□ 1.32
TGFA-202ENST00000394241 PIK3C2GO75747 1445 aa23.32■■□□□ 1.32
TGFA-202ENST00000394241 PRAG1Q86YV5 1406 aa23.32■■□□□ 1.32
TGFA-202ENST00000394241 ADGRF5Q8IZF2 1346 aa23.32■■□□□ 1.32
TGFA-202ENST00000394241 RALGAPBQ86X10 1494 aa23.31■■□□□ 1.32
TGFA-202ENST00000394241 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
TGFA-202ENST00000394241 ESCO1Q5FWF5 840 aa23.3■■□□□ 1.32
TGFA-202ENST00000394241 DCAF11Q8TEB1 546 aa23.3■■□□□ 1.32
TGFA-202ENST00000394241 SF3B2Q13435 895 aaKnown RBP23.29■■□□□ 1.32
TGFA-202ENST00000394241 UNC5CLQ8IV45 518 aa23.29■■□□□ 1.32
TGFA-202ENST00000394241 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
TGFA-202ENST00000394241 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
TGFA-202ENST00000394241 XPCQ01831 940 aaPredicted RBP23.27■■□□□ 1.32
TGFA-202ENST00000394241 SLIT2O94813 1529 aa23.27■■□□□ 1.32
TGFA-202ENST00000394241 TONSLQ96HA7 1378 aa23.27■■□□□ 1.31
TGFA-202ENST00000394241 FOXO3O43524 673 aa23.26■■□□□ 1.31
TGFA-202ENST00000394241 KDM2AQ9Y2K7 1162 aa23.25■■□□□ 1.31
TGFA-202ENST00000394241 LRPPRCP42704 1394 aaKnown RBP23.24■■□□□ 1.31
TGFA-202ENST00000394241 L3MBTL2Q969R5 705 aa23.23■■□□□ 1.31
TGFA-202ENST00000394241 SEPT12Q8IYM1 358 aa23.21■■□□□ 1.31
TGFA-202ENST00000394241 USP32Q8NFA0 1604 aa23.21■■□□□ 1.31
TGFA-202ENST00000394241 PSDA5PKW4 1024 aaPredicted RBP23.18■■□□□ 1.3
TGFA-202ENST00000394241 KIAA1210Q9ULL0 1709 aa23.18■■□□□ 1.3
TGFA-202ENST00000394241 SPATA31A3Q5VYP0 1347 aa23.16■■□□□ 1.3
TGFA-202ENST00000394241 C14orf93Q9H972 538 aaKnown RBP23.16■■□□□ 1.3
TGFA-202ENST00000394241 NUTM2FA1L443 756 aa23.15■■□□□ 1.3
TGFA-202ENST00000394241 VPS72Q15906 364 aa23.15■■□□□ 1.3
TGFA-202ENST00000394241 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
TGFA-202ENST00000394241 KRT27Q7Z3Y8 459 aa23.15■■□□□ 1.3
TGFA-202ENST00000394241 PLCH1Q4KWH8 1693 aa23.14■■□□□ 1.29
TGFA-202ENST00000394241 KNDC1Q76NI1 1749 aa23.13■■□□□ 1.29
TGFA-202ENST00000394241 NWD2Q9ULI1 1742 aa23.13■■□□□ 1.29
TGFA-202ENST00000394241 KIF1AQ12756 1690 aa23.13■■□□□ 1.29
TGFA-202ENST00000394241 ONECUT3O60422 494 aaPredicted RBP23.13■■□□□ 1.29
TGFA-202ENST00000394241 BAG6P46379 1132 aa23.13■■□□□ 1.29
TGFA-202ENST00000394241 ADGRB1O14514 1584 aa23.13■■□□□ 1.29
TGFA-202ENST00000394241 TRPM1Q7Z4N2 1603 aa23.11■■□□□ 1.29
TGFA-202ENST00000394241 HAP1P54257 671 aaPredicted RBP23.11■■□□□ 1.29
TGFA-202ENST00000394241 CCDC9Q9Y3X0 531 aaKnown RBP23.11■■□□□ 1.29
TGFA-202ENST00000394241 YTHDC2Q9H6S0 1430 aaKnown RBP23.1■■□□□ 1.29
TGFA-202ENST00000394241 TIMELESSQ9UNS1 1208 aa23.1■■□□□ 1.29
TGFA-202ENST00000394241 FMN2Q9NZ56 1722 aa23.1■■□□□ 1.29
TGFA-202ENST00000394241 TMEM132EQ6IEE7 984 aa23.09■■□□□ 1.29
TGFA-202ENST00000394241 TECPR2O15040 1411 aa23.08■■□□□ 1.29
TGFA-202ENST00000394241 KRT28Q7Z3Y7 464 aa23.08■■□□□ 1.29
TGFA-202ENST00000394241 WAPLQ7Z5K2 1190 aa23.08■■□□□ 1.29
TGFA-202ENST00000394241 TNS3Q68CZ2 1445 aa23.07■■□□□ 1.28
TGFA-202ENST00000394241 CABLES1Q8TDN4 633 aa23.06■■□□□ 1.28
TGFA-202ENST00000394241 STK26Q9P289 416 aa23.06■■□□□ 1.28
TGFA-202ENST00000394241 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
TGFA-202ENST00000394241 ABCC11Q96J66 1382 aa23.05■■□□□ 1.28
TGFA-202ENST00000394241 A0A0G2JS52 829 aa23.05■■□□□ 1.28
TGFA-202ENST00000394241 MYT1Q01538 1121 aa23.05■■□□□ 1.28
TGFA-202ENST00000394241 RGPD1P0DJD0 1748 aa23.05■■□□□ 1.28
TGFA-202ENST00000394241 DLC1Q96QB1 1528 aa23.03■■□□□ 1.28
TGFA-202ENST00000394241 PLEKHH1Q9ULM0 1364 aa23.02■■□□□ 1.28
TGFA-202ENST00000394241 RGPD8O14715 1765 aaPredicted RBP23.02■■□□□ 1.28
TGFA-202ENST00000394241 PLEKHG5O94827 1062 aa23.02■■□□□ 1.28
TGFA-202ENST00000394241 EN1Q05925 392 aaPredicted RBP23.02■■□□□ 1.28
TGFA-202ENST00000394241 NBPF8Q3BBV2 869 aa23.02■■□□□ 1.28
TGFA-202ENST00000394241 ROCK2O75116 1388 aaKnown RBP23.01■■□□□ 1.27
TGFA-202ENST00000394241 PSME1Q06323 249 aa23.01■■□□□ 1.27
TGFA-202ENST00000394241 R3HDM1Q15032 1099 aaKnown RBP23.01■■□□□ 1.27
TGFA-202ENST00000394241 ARHGEF28Q8N1W1 1705 aaKnown RBP23■■□□□ 1.27
TGFA-202ENST00000394241 NRAPQ86VF7 1730 aa22.99■■□□□ 1.27
TGFA-202ENST00000394241 FAM98CQ17RN3 349 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms