RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 SPATA31E1Q6ZUB1 1445 aa10.41□□□□□ -0.74
DHFR2-202ENST00000394221 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
DHFR2-202ENST00000394221 AQRO60306 1485 aaKnown RBP eCLIP10.41□□□□□ -0.74
DHFR2-202ENST00000394221 MPNDQ8N594 471 aa10.4□□□□□ -0.74
DHFR2-202ENST00000394221 CREBRFQ8IUR6 639 aa10.4□□□□□ -0.74
DHFR2-202ENST00000394221 GPATCH11Q8N954 259 aa10.4□□□□□ -0.74
DHFR2-202ENST00000394221 TMX1Q9H3N1 280 aa10.4□□□□□ -0.74
DHFR2-202ENST00000394221 SMC4Q9NTJ3 1288 aa10.4□□□□□ -0.74
DHFR2-202ENST00000394221 PDZRN3Q9UPQ7 1066 aa10.4□□□□□ -0.74
DHFR2-202ENST00000394221 PRXQ9BXM0 1461 aa10.4□□□□□ -0.75
DHFR2-202ENST00000394221 SNX21Q969T3 373 aa10.4□□□□□ -0.75
DHFR2-202ENST00000394221 PTPN23Q9H3S7 1636 aa10.39□□□□□ -0.75
DHFR2-202ENST00000394221 MLECQ14165 292 aa10.39□□□□□ -0.75
DHFR2-202ENST00000394221 WDR43Q15061 677 aaKnown RBP eCLIP10.39□□□□□ -0.75
DHFR2-202ENST00000394221 DDIT3P35638 169 aa10.39□□□□□ -0.75
DHFR2-202ENST00000394221 FKBP5Q13451 457 aaPredicted RBP10.39□□□□□ -0.75
DHFR2-202ENST00000394221 LRSAM1Q6UWE0 723 aa10.39□□□□□ -0.75
DHFR2-202ENST00000394221 NCAPGQ9BPX3 1015 aa10.39□□□□□ -0.75
DHFR2-202ENST00000394221 RRP7BPQ9NSQ0 103 aa10.39□□□□□ -0.75
DHFR2-202ENST00000394221 GOLGA6L1Q8N7Z2 621 aa10.38□□□□□ -0.75
DHFR2-202ENST00000394221 DDX41Q9UJV9 622 aaKnown RBP10.38□□□□□ -0.75
DHFR2-202ENST00000394221 ZMYM3Q14202 1370 aa10.38□□□□□ -0.75
DHFR2-202ENST00000394221 PRR29P0C7W0 189 aa10.38□□□□□ -0.75
DHFR2-202ENST00000394221 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
DHFR2-202ENST00000394221 CCDC144AA2RUR9 1427 aa10.38□□□□□ -0.75
DHFR2-202ENST00000394221 PHF14O94880 888 aa10.38□□□□□ -0.75
DHFR2-202ENST00000394221 CTNNA3Q9UI47 895 aa10.38□□□□□ -0.75
DHFR2-202ENST00000394221 COG6Q9Y2V7 657 aa10.38□□□□□ -0.75
DHFR2-202ENST00000394221 NAIPQ13075 1403 aa10.38□□□□□ -0.75
DHFR2-202ENST00000394221 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
DHFR2-202ENST00000394221 SYCE3A1L190 88 aa10.37□□□□□ -0.75
DHFR2-202ENST00000394221 SLC26A8Q96RN1 970 aa10.37□□□□□ -0.75
DHFR2-202ENST00000394221 MPHOSPH9Q99550 1183 aa10.37□□□□□ -0.75
DHFR2-202ENST00000394221 NCOA3Q9Y6Q9 1424 aa10.37□□□□□ -0.75
DHFR2-202ENST00000394221 ICE2Q659A1 982 aa10.37□□□□□ -0.75
DHFR2-202ENST00000394221 C17orf53Q8N3J3 647 aaPredicted RBP10.37□□□□□ -0.75
DHFR2-202ENST00000394221 RWDD1Q9H446 243 aaPredicted RBP10.37□□□□□ -0.75
DHFR2-202ENST00000394221 EP400NLQ6ZTU2 488 aa10.37□□□□□ -0.75
DHFR2-202ENST00000394221 RAD51AP2Q09MP3 1159 aa10.36□□□□□ -0.75
DHFR2-202ENST00000394221 CEP83Q9Y592 693 aa10.36□□□□□ -0.75
DHFR2-202ENST00000394221 MORC2Q9Y6X9 1032 aaPredicted RBP10.36□□□□□ -0.75
DHFR2-202ENST00000394221 HNRNPH2P55795 449 aaKnown RBP10.36□□□□□ -0.75
DHFR2-202ENST00000394221 TOMM22Q9NS69 142 aa10.36□□□□□ -0.75
DHFR2-202ENST00000394221 RBM27Q9P2N5 1060 aaKnown RBP10.36□□□□□ -0.75
DHFR2-202ENST00000394221 DHX16O60231 1041 aaKnown RBP10.36□□□□□ -0.75
DHFR2-202ENST00000394221 NUCB2P80303 420 aa10.36□□□□□ -0.75
DHFR2-202ENST00000394221 TMED8Q6PL24 325 aaPredicted RBP10.36□□□□□ -0.75
DHFR2-202ENST00000394221 TSPY26PQ9H489 355 aa10.36□□□□□ -0.75
DHFR2-202ENST00000394221 FGD6Q6ZV73 1430 aa10.36□□□□□ -0.75
DHFR2-202ENST00000394221 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
DHFR2-202ENST00000394221 CARD10Q9BWT7 1032 aa10.36□□□□□ -0.75
DHFR2-202ENST00000394221 TTC12Q9H892 705 aaPredicted RBP10.36□□□□□ -0.75
DHFR2-202ENST00000394221 K7ELQ4 463 aaPredicted RBP10.35□□□□□ -0.75
DHFR2-202ENST00000394221 PRPF40AO75400 957 aaKnown RBP10.35□□□□□ -0.75
DHFR2-202ENST00000394221 PDE3AQ14432 1141 aa10.35□□□□□ -0.75
DHFR2-202ENST00000394221 GRIPAP1Q4V328 841 aa10.35□□□□□ -0.75
DHFR2-202ENST00000394221 BRMS1Q9HCU9 246 aa10.35□□□□□ -0.75
DHFR2-202ENST00000394221 MTUS2Q5JR59 1369 aa10.35□□□□□ -0.75
DHFR2-202ENST00000394221 NOL10Q9BSC4 688 aaKnown RBP10.35□□□□□ -0.75
DHFR2-202ENST00000394221 BCAR3O75815 825 aa10.34□□□□□ -0.75
DHFR2-202ENST00000394221 CCDC172P0C7W6 258 aa10.34□□□□□ -0.75
DHFR2-202ENST00000394221 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
DHFR2-202ENST00000394221 NCBP1Q09161 790 aaKnown RBP10.34□□□□□ -0.75
DHFR2-202ENST00000394221 ZMYM4Q5VZL5 1548 aa10.34□□□□□ -0.75
DHFR2-202ENST00000394221 FANCD2Q9BXW9 1451 aa10.34□□□□□ -0.75
DHFR2-202ENST00000394221 CHIC2Q9UKJ5 165 aa10.34□□□□□ -0.75
DHFR2-202ENST00000394221 BLMP54132 1417 aaPredicted RBP10.34□□□□□ -0.75
DHFR2-202ENST00000394221 BRPF1P55201 1214 aaPredicted RBP10.34□□□□□ -0.75
DHFR2-202ENST00000394221 SYAP1Q96A49 352 aaPredicted RBP10.34□□□□□ -0.75
DHFR2-202ENST00000394221 SPTLC3Q9NUV7 552 aa10.34□□□□□ -0.75
DHFR2-202ENST00000394221 CTIFO43310 598 aaKnown RBP10.33□□□□□ -0.76
DHFR2-202ENST00000394221 TEX35Q5T0J7 233 aa10.33□□□□□ -0.76
DHFR2-202ENST00000394221 C10orf67Q8IYJ2 551 aa10.33□□□□□ -0.76
DHFR2-202ENST00000394221 CEP120Q8N960 986 aa10.33□□□□□ -0.76
DHFR2-202ENST00000394221 KIF18AQ8NI77 898 aa10.33□□□□□ -0.76
DHFR2-202ENST00000394221 PANK1Q8TE04 598 aa10.33□□□□□ -0.76
DHFR2-202ENST00000394221 SYCP1Q15431 976 aa10.33□□□□□ -0.76
DHFR2-202ENST00000394221 INSRP06213 1382 aa10.33□□□□□ -0.76
DHFR2-202ENST00000394221 PLCB2Q00722 1185 aa10.33□□□□□ -0.76
DHFR2-202ENST00000394221 LMBRD1Q9NUN5 540 aa10.33□□□□□ -0.76
DHFR2-202ENST00000394221 CASQ1P31415 396 aa10.32□□□□□ -0.76
DHFR2-202ENST00000394221 NOP2P46087 812 aaKnown RBP10.32□□□□□ -0.76
DHFR2-202ENST00000394221 HSP90AB3PQ58FF7 597 aa10.32□□□□□ -0.76
DHFR2-202ENST00000394221 SIRT1Q96EB6 747 aa10.32□□□□□ -0.76
DHFR2-202ENST00000394221 DEF6Q9H4E7 631 aa10.32□□□□□ -0.76
DHFR2-202ENST00000394221 CWC15Q9P013 229 aaKnown RBP10.32□□□□□ -0.76
DHFR2-202ENST00000394221 CLEC17AQ6ZS10 378 aa10.32□□□□□ -0.76
DHFR2-202ENST00000394221 SATB1Q01826 763 aa10.32□□□□□ -0.76
DHFR2-202ENST00000394221 CT47A1Q5JQC4 288 aaPredicted RBP10.32□□□□□ -0.76
DHFR2-202ENST00000394221 MBD3O95983 291 aa10.31□□□□□ -0.76
DHFR2-202ENST00000394221 MCCP23508 829 aa10.31□□□□□ -0.76
DHFR2-202ENST00000394221 TDO2P48775 406 aa10.31□□□□□ -0.76
DHFR2-202ENST00000394221 NOM1Q5C9Z4 860 aaKnown RBP10.31□□□□□ -0.76
DHFR2-202ENST00000394221 GOLIM4O00461 696 aa10.31□□□□□ -0.76
DHFR2-202ENST00000394221 GUCY2CP25092 1073 aa10.31□□□□□ -0.76
DHFR2-202ENST00000394221 ZNF397Q8NF99 534 aaPredicted RBP10.31□□□□□ -0.76
DHFR2-202ENST00000394221 TPM3P06753 285 aa10.31□□□□□ -0.76
DHFR2-202ENST00000394221 TNNT1P13805 278 aa10.31□□□□□ -0.76
DHFR2-202ENST00000394221 PLCD4Q9BRC7 762 aa10.31□□□□□ -0.76
DHFR2-202ENST00000394221 CARD11Q9BXL7 1154 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms