RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 QTRT2Q9H974 415 aaKnown RBP28.15■■■□□ 2.1
CRAT-202ENST00000393384 ROBO2Q9HCK4 1378 aa28.13■■■□□ 2.09
CRAT-202ENST00000393384 RGS12O14924 1447 aa28.13■■■□□ 2.09
CRAT-202ENST00000393384 HRCP23327 699 aa28.13■■■□□ 2.09
CRAT-202ENST00000393384 SOS2Q07890 1332 aaPredicted RBP28.11■■■□□ 2.09
CRAT-202ENST00000393384 NGLY1Q96IV0 654 aa28.1■■■□□ 2.09
CRAT-202ENST00000393384 ADAMTS2O95450 1211 aa28.09■■■□□ 2.09
CRAT-202ENST00000393384 PIK3C2GO75747 1445 aa28.09■■■□□ 2.09
CRAT-202ENST00000393384 ORAI2Q96SN7 254 aa28.08■■■□□ 2.09
CRAT-202ENST00000393384 KNDC1Q76NI1 1749 aa28.07■■■□□ 2.08
CRAT-202ENST00000393384 MYOM2P54296 1465 aa28.03■■■□□ 2.08
CRAT-202ENST00000393384 NRXN1Q9ULB1 1477 aa28.02■■■□□ 2.08
CRAT-202ENST00000393384 TECPR2O15040 1411 aa28.02■■■□□ 2.08
CRAT-202ENST00000393384 LRPPRCP42704 1394 aaKnown RBP28.02■■■□□ 2.08
CRAT-202ENST00000393384 USP21Q9UK80 565 aa28.02■■■□□ 2.08
CRAT-202ENST00000393384 TRPC5Q9UL62 973 aaPredicted RBP28■■■□□ 2.07
CRAT-202ENST00000393384 ABCC11Q96J66 1382 aa27.99■■■□□ 2.07
CRAT-202ENST00000393384 TMEM132EQ6IEE7 984 aa27.99■■■□□ 2.07
CRAT-202ENST00000393384 C14orf93Q9H972 538 aaKnown RBP27.99■■■□□ 2.07
CRAT-202ENST00000393384 COL22A1Q8NFW1 1626 aaPredicted RBP27.99■■■□□ 2.07
CRAT-202ENST00000393384 ATAD2Q6PL18 1390 aa27.99■■■□□ 2.07
CRAT-202ENST00000393384 NPHP3Q7Z494 1330 aa27.98■■■□□ 2.07
CRAT-202ENST00000393384 FNBP4Q8N3X1 1017 aaPredicted RBP27.98■■■□□ 2.07
CRAT-202ENST00000393384 STK26Q9P289 416 aa27.98■■■□□ 2.07
CRAT-202ENST00000393384 CDC42BPGQ6DT37 1551 aa27.98■■■□□ 2.07
CRAT-202ENST00000393384 YTHDC2Q9H6S0 1430 aaKnown RBP27.96■■■□□ 2.07
CRAT-202ENST00000393384 ESCO1Q5FWF5 840 aa27.95■■■□□ 2.06
CRAT-202ENST00000393384 ATRNO75882 1429 aa27.93■■■□□ 2.06
CRAT-202ENST00000393384 WAPLQ7Z5K2 1190 aa27.93■■■□□ 2.06
CRAT-202ENST00000393384 CFAP70Q5T0N1 1121 aa27.92■■■□□ 2.06
CRAT-202ENST00000393384 SIRT1Q96EB6 747 aa27.92■■■□□ 2.06
CRAT-202ENST00000393384 DHX57Q6P158 1386 aaKnown RBP27.91■■■□□ 2.06
CRAT-202ENST00000393384 PXDNQ92626 1479 aa27.9■■■□□ 2.06
CRAT-202ENST00000393384 PLEKHH1Q9ULM0 1364 aa27.89■■■□□ 2.06
CRAT-202ENST00000393384 FMN2Q9NZ56 1722 aa27.87■■■□□ 2.05
CRAT-202ENST00000393384 STAC3Q96MF2 364 aa27.87■■■□□ 2.05
CRAT-202ENST00000393384 FOXO3O43524 673 aa27.86■■■□□ 2.05
CRAT-202ENST00000393384 MARF1Q9Y4F3 1742 aaKnown RBP27.85■■■□□ 2.05
CRAT-202ENST00000393384 DCAF11Q8TEB1 546 aa27.85■■■□□ 2.05
CRAT-202ENST00000393384 BCL9LQ86UU0 1499 aa27.84■■■□□ 2.05
CRAT-202ENST00000393384 XPCQ01831 940 aaPredicted RBP27.83■■■□□ 2.05
CRAT-202ENST00000393384 KDM2AQ9Y2K7 1162 aa27.83■■■□□ 2.05
CRAT-202ENST00000393384 DLC1Q96QB1 1528 aa27.82■■■□□ 2.04
CRAT-202ENST00000393384 RGPD8O14715 1765 aaPredicted RBP27.82■■■□□ 2.04
CRAT-202ENST00000393384 ADGRB1O14514 1584 aa27.82■■■□□ 2.04
CRAT-202ENST00000393384 SRCAPQ6ZRS2 3230 aa27.8■■■□□ 2.04
CRAT-202ENST00000393384 NUTM2FA1L443 756 aa27.79■■■□□ 2.04
CRAT-202ENST00000393384 CCDC125Q86Z20 511 aa27.79■■■□□ 2.04
CRAT-202ENST00000393384 GJD4Q96KN9 370 aaPredicted RBP27.79■■■□□ 2.04
CRAT-202ENST00000393384 EP400Q96L91 3159 aa27.79■■■□□ 2.04
CRAT-202ENST00000393384 KIF1AQ12756 1690 aa27.78■■■□□ 2.04
CRAT-202ENST00000393384 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.76■■■□□ 2.03
CRAT-202ENST00000393384 PRAM1Q96QH2 718 aa27.76■■■□□ 2.03
CRAT-202ENST00000393384 ZRANB1Q9UGI0 708 aa27.76■■■□□ 2.03
CRAT-202ENST00000393384 SPATA31A3Q5VYP0 1347 aa27.74■■■□□ 2.03
CRAT-202ENST00000393384 UNC5CLQ8IV45 518 aa27.73■■■□□ 2.03
CRAT-202ENST00000393384 POGKQ9P215 609 aa27.73■■■□□ 2.03
CRAT-202ENST00000393384 SLIT2O94813 1529 aa27.72■■■□□ 2.03
CRAT-202ENST00000393384 ADGRB2O60241 1585 aa27.71■■■□□ 2.03
CRAT-202ENST00000393384 SAFB2Q14151 953 aaKnown RBP eCLIP27.71■■■□□ 2.03
CRAT-202ENST00000393384 TRAK1Q9UPV9 953 aa27.71■■■□□ 2.03
CRAT-202ENST00000393384 KIAA1210Q9ULL0 1709 aa27.7■■■□□ 2.03
CRAT-202ENST00000393384 KRT28Q7Z3Y7 464 aa27.69■■■□□ 2.02
CRAT-202ENST00000393384 RALGAPBQ86X10 1494 aa27.69■■■□□ 2.02
CRAT-202ENST00000393384 USP32Q8NFA0 1604 aa27.68■■■□□ 2.02
CRAT-202ENST00000393384 ARHGEF28Q8N1W1 1705 aaKnown RBP27.68■■■□□ 2.02
CRAT-202ENST00000393384 GLI3P10071 1580 aa27.67■■■□□ 2.02
CRAT-202ENST00000393384 TNS3Q68CZ2 1445 aa27.66■■■□□ 2.02
CRAT-202ENST00000393384 PSME1Q06323 249 aa27.65■■■□□ 2.02
CRAT-202ENST00000393384 PHF8Q9UPP1 1060 aa27.65■■■□□ 2.02
CRAT-202ENST00000393384 HAP1P54257 671 aaPredicted RBP27.64■■■□□ 2.02
CRAT-202ENST00000393384 BLMP54132 1417 aaPredicted RBP27.63■■■□□ 2.01
CRAT-202ENST00000393384 ANKARQ7Z5J8 1434 aa27.63■■■□□ 2.01
CRAT-202ENST00000393384 SBNO1A3KN83 1393 aa27.6■■■□□ 2.01
CRAT-202ENST00000393384 VPS72Q15906 364 aa27.59■■■□□ 2.01
CRAT-202ENST00000393384 MINK1Q8N4C8 1332 aaPredicted RBP27.59■■■□□ 2.01
CRAT-202ENST00000393384 ARHGEF10O15013 1369 aa27.59■■■□□ 2.01
CRAT-202ENST00000393384 HIRIP3Q9BW71 556 aaPredicted RBP27.58■■■□□ 2.01
CRAT-202ENST00000393384 EIF3AQ14152 1382 aaKnown RBP27.58■■■□□ 2.01
CRAT-202ENST00000393384 NWD2Q9ULI1 1742 aa27.57■■■□□ 2
CRAT-202ENST00000393384 BRWD3Q6RI45 1802 aa27.57■■■□□ 2
CRAT-202ENST00000393384 SEPT12Q8IYM1 358 aa27.56■■■□□ 2
CRAT-202ENST00000393384 CABLES1Q8TDN4 633 aa27.56■■■□□ 2
CRAT-202ENST00000393384 TULP4Q9NRJ4 1543 aa27.56■■■□□ 2
CRAT-202ENST00000393384 WASLO00401 505 aaPredicted RBP27.55■■■□□ 2
CRAT-202ENST00000393384 PLCH1Q4KWH8 1693 aa27.55■■■□□ 2
CRAT-202ENST00000393384 SF3B2Q13435 895 aaKnown RBP27.54■■■□□ 2
CRAT-202ENST00000393384 LMOD2Q6P5Q4 547 aa27.54■■■□□ 2
CRAT-202ENST00000393384 ITSN1Q15811 1721 aa27.53■■■□□ 2
CRAT-202ENST00000393384 ABCA3Q99758 1704 aa27.53■■■□□ 2
CRAT-202ENST00000393384 CCDC9Q9Y3X0 531 aaKnown RBP27.53■■■□□ 2
CRAT-202ENST00000393384 ONECUT3O60422 494 aaPredicted RBP27.52■■■□□ 2
CRAT-202ENST00000393384 PMFBP1Q8TBY8 1022 aa27.52■■■□□ 2
CRAT-202ENST00000393384 PLEKHG5O94827 1062 aa27.51■■□□□ 1.99
CRAT-202ENST00000393384 TRPM3Q9HCF6 1732 aaPredicted RBP27.5■■□□□ 1.99
CRAT-202ENST00000393384 PRR36Q9H6K5 1346 aa27.5■■□□□ 1.99
CRAT-202ENST00000393384 NBPF1Q3BBV0 1214 aa27.5■■□□□ 1.99
CRAT-202ENST00000393384 DEFB132Q7Z7B7 95 aa27.49■■□□□ 1.99
CRAT-202ENST00000393384 SIN3AQ96ST3 1273 aa27.49■■□□□ 1.99
CRAT-202ENST00000393384 KRT27Q7Z3Y8 459 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms