RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 TXNDC2Q86VQ3 553 aa15.16■□□□□ 0.02
PDGFD-202ENST00000393158 CENPJQ9HC77 1338 aaPredicted RBP15.16■□□□□ 0.02
PDGFD-202ENST00000393158 ATP7BP35670 1465 aa15.14■□□□□ 0.01
PDGFD-202ENST00000393158 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
PDGFD-202ENST00000393158 NPHP4O75161 1426 aaPredicted RBP15.13■□□□□ 0.01
PDGFD-202ENST00000393158 TBX22Q9Y458 520 aa15.13■□□□□ 0.01
PDGFD-202ENST00000393158 WAPLQ7Z5K2 1190 aa15.13■□□□□ 0.01
PDGFD-202ENST00000393158 SIRT1Q96EB6 747 aa15.13■□□□□ 0.01
PDGFD-202ENST00000393158 KIF20BQ96Q89 1820 aa15.13■□□□□ 0.01
PDGFD-202ENST00000393158 PRAM1Q96QH2 718 aa15.12■□□□□ 0.01
PDGFD-202ENST00000393158 SLC26A8Q96RN1 970 aa15.12■□□□□ 0.01
PDGFD-202ENST00000393158 ITSN1Q15811 1721 aa15.12■□□□□ 0.01
PDGFD-202ENST00000393158 PIK3R4Q99570 1358 aa15.11■□□□□ 0.01
PDGFD-202ENST00000393158 NKTRP30414 1462 aaKnown RBP15.11■□□□□ 0.01
PDGFD-202ENST00000393158 CDC42BPGQ6DT37 1551 aa15.1■□□□□ 0.01
PDGFD-202ENST00000393158 CARD14Q9BXL6 1004 aa15.1■□□□□ 0.01
PDGFD-202ENST00000393158 USP54Q70EL1 1684 aa15.09■□□□□ 0.01
PDGFD-202ENST00000393158 NCKAP5LQ9HCH0 1330 aa15.09■□□□□ 0.01
PDGFD-202ENST00000393158 STK26Q9P289 416 aa15.08■□□□□ 0.01
PDGFD-202ENST00000393158 TMF1P82094 1093 aa15.07■□□□□ 0
PDGFD-202ENST00000393158 CCDC184Q52MB2 194 aa15.07■□□□□ 0
PDGFD-202ENST00000393158 PARD3Q8TEW0 1356 aa15.07■□□□□ 0
PDGFD-202ENST00000393158 PUS7Q96PZ0 661 aaKnown RBP15.06■□□□□ 0
PDGFD-202ENST00000393158 PRR36Q9H6K5 1346 aa15.06■□□□□ 0
PDGFD-202ENST00000393158 SHPRHQ149N8 1683 aa15.06■□□□□ 0
PDGFD-202ENST00000393158 CPSF1Q10570 1443 aaKnown RBP15.06■□□□□ 0
PDGFD-202ENST00000393158 AMER1Q5JTC6 1135 aaPredicted RBP15.05■□□□□ -0
PDGFD-202ENST00000393158 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
PDGFD-202ENST00000393158 PRKCSHP14314 528 aaPredicted RBP15.04■□□□□ -0
PDGFD-202ENST00000393158 KCNA6P17658 529 aa15.04■□□□□ -0
PDGFD-202ENST00000393158 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
PDGFD-202ENST00000393158 EID1Q9Y6B2 187 aa15.04■□□□□ -0
PDGFD-202ENST00000393158 AMOTL2Q9Y2J4 779 aa15.03■□□□□ -0
PDGFD-202ENST00000393158 HSPA2P54652 639 aa15.03■□□□□ -0
PDGFD-202ENST00000393158 HDGFP51858 240 aaKnown RBP15.03■□□□□ -0
PDGFD-202ENST00000393158 PANK3Q9H999 370 aa15.03■□□□□ -0
PDGFD-202ENST00000393158 A0A1W2PP64 1363 aa15.02■□□□□ -0
PDGFD-202ENST00000393158 SAFB2Q14151 953 aaKnown RBP eCLIP15.02■□□□□ -0
PDGFD-202ENST00000393158 SCAF1Q9H7N4 1312 aaKnown RBP15.02□□□□□ -0.01
PDGFD-202ENST00000393158 SSH2Q76I76 1423 aa15.02□□□□□ -0.01
PDGFD-202ENST00000393158 TRPM3Q9HCF6 1732 aaPredicted RBP15.02□□□□□ -0.01
PDGFD-202ENST00000393158 PIK3C2AO00443 1686 aa15.02□□□□□ -0.01
PDGFD-202ENST00000393158 CABP2Q9NPB3 220 aa15.01□□□□□ -0.01
PDGFD-202ENST00000393158 MINK1Q8N4C8 1332 aaPredicted RBP15.01□□□□□ -0.01
PDGFD-202ENST00000393158 NPC1L1Q9UHC9 1359 aa15.01□□□□□ -0.01
PDGFD-202ENST00000393158 SLC12A5Q9H2X9 1139 aa15□□□□□ -0.01
PDGFD-202ENST00000393158 ANKRD36BQ8N2N9 1353 aa15□□□□□ -0.01
PDGFD-202ENST00000393158 CDK19Q9BWU1 502 aa14.99□□□□□ -0.01
PDGFD-202ENST00000393158 CRYBG1Q9Y4K1 1723 aa14.98□□□□□ -0.01
PDGFD-202ENST00000393158 WASLO00401 505 aaPredicted RBP14.98□□□□□ -0.01
PDGFD-202ENST00000393158 EVC2Q86UK5 1308 aa14.98□□□□□ -0.01
PDGFD-202ENST00000393158 ADGRL3Q9HAR2 1447 aa14.97□□□□□ -0.01
PDGFD-202ENST00000393158 MAP2P11137 1827 aaKnown RBP14.97□□□□□ -0.01
PDGFD-202ENST00000393158 LTBP4Q8N2S1 1624 aa14.96□□□□□ -0.01
PDGFD-202ENST00000393158 NINLQ9Y2I6 1382 aa14.96□□□□□ -0.01
PDGFD-202ENST00000393158 LRRC7Q96NW7 1537 aa14.95□□□□□ -0.02
PDGFD-202ENST00000393158 NSD3Q9BZ95 1437 aa14.95□□□□□ -0.02
PDGFD-202ENST00000393158 PPIP5K1Q6PFW1 1433 aa14.95□□□□□ -0.02
PDGFD-202ENST00000393158 ATAD2Q6PL18 1390 aa14.94□□□□□ -0.02
PDGFD-202ENST00000393158 PEAK1Q9H792 1746 aa14.94□□□□□ -0.02
PDGFD-202ENST00000393158 ALS2Q96Q42 1657 aa14.94□□□□□ -0.02
PDGFD-202ENST00000393158 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
PDGFD-202ENST00000393158 CCER2I3L3R5 266 aa14.93□□□□□ -0.02
PDGFD-202ENST00000393158 ANKARQ7Z5J8 1434 aa14.92□□□□□ -0.02
PDGFD-202ENST00000393158 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
PDGFD-202ENST00000393158 COL3A1P02461 1466 aaPredicted RBP14.92□□□□□ -0.02
PDGFD-202ENST00000393158 SLC24A1O60721 1099 aa14.91□□□□□ -0.02
PDGFD-202ENST00000393158 CDCA8Q53HL2 280 aa14.91□□□□□ -0.02
PDGFD-202ENST00000393158 KTN1Q86UP2 1357 aaKnown RBP14.91□□□□□ -0.02
PDGFD-202ENST00000393158 POGKQ9P215 609 aa14.91□□□□□ -0.02
PDGFD-202ENST00000393158 POLR3GLQ9BT43 218 aa14.9□□□□□ -0.02
PDGFD-202ENST00000393158 CABP1Q9NZU7 370 aa14.9□□□□□ -0.02
PDGFD-202ENST00000393158 KIF1AQ12756 1690 aa14.89□□□□□ -0.03
PDGFD-202ENST00000393158 MST1RQ04912 1400 aa14.89□□□□□ -0.03
PDGFD-202ENST00000393158 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
PDGFD-202ENST00000393158 NCOA3Q9Y6Q9 1424 aa14.88□□□□□ -0.03
PDGFD-202ENST00000393158 USP6P35125 1406 aa14.88□□□□□ -0.03
PDGFD-202ENST00000393158 RGPD1P0DJD0 1748 aa14.88□□□□□ -0.03
PDGFD-202ENST00000393158 BCL11AQ9H165 835 aa14.87□□□□□ -0.03
PDGFD-202ENST00000393158 PHRF1Q9P1Y6 1649 aaKnown RBP14.87□□□□□ -0.03
PDGFD-202ENST00000393158 PLEKHG3A1L390 1219 aa14.87□□□□□ -0.03
PDGFD-202ENST00000393158 OVOS2A0A0J9YW53 1432 aa14.86□□□□□ -0.03
PDGFD-202ENST00000393158 DCCP43146 1447 aa14.86□□□□□ -0.03
PDGFD-202ENST00000393158 OVOS2Q6IE36 1432 aa14.86□□□□□ -0.03
PDGFD-202ENST00000393158 EDC4Q6P2E9 1401 aaKnown RBP14.86□□□□□ -0.03
PDGFD-202ENST00000393158 ANP32CO43423 234 aa14.86□□□□□ -0.03
PDGFD-202ENST00000393158 SMG6Q86US8 1419 aaKnown RBP14.86□□□□□ -0.03
PDGFD-202ENST00000393158 NHSL1Q5SYE7 1610 aa14.86□□□□□ -0.03
PDGFD-202ENST00000393158 LTN1O94822 1766 aa14.86□□□□□ -0.03
PDGFD-202ENST00000393158 BCANQ96GW7 911 aa14.85□□□□□ -0.03
PDGFD-202ENST00000393158 ABCA3Q99758 1704 aa14.85□□□□□ -0.03
PDGFD-202ENST00000393158 SRPK2P78362 688 aaKnown RBP14.85□□□□□ -0.03
PDGFD-202ENST00000393158 ZNF335Q9H4Z2 1342 aaPredicted RBP14.85□□□□□ -0.03
PDGFD-202ENST00000393158 FYB1O15117 783 aa14.85□□□□□ -0.03
PDGFD-202ENST00000393158 TMEM94Q12767 1356 aa14.85□□□□□ -0.03
PDGFD-202ENST00000393158 MYBBP1AQ9BQG0 1328 aaKnown RBP14.84□□□□□ -0.03
PDGFD-202ENST00000393158 CC2D1BQ5T0F9 858 aaKnown RBP14.84□□□□□ -0.03
PDGFD-202ENST00000393158 CCDC61Q9Y6R9 512 aa14.84□□□□□ -0.03
PDGFD-202ENST00000393158 C1orf167Q5SNV9 1468 aa14.84□□□□□ -0.03
PDGFD-202ENST00000393158 BRD4O60885 1362 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms