RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 DISP3Q9P2K9 1392 aa23.82■■□□□ 1.4
ERCC2-202ENST00000391942 ZNF316A6NFI3 1004 aaPredicted RBP23.81■■□□□ 1.4
ERCC2-202ENST00000391942 C11orf95C9JLR9 678 aaPredicted RBP23.81■■□□□ 1.4
ERCC2-202ENST00000391942 C14orf37Q86TY3 774 aa23.81■■□□□ 1.4
ERCC2-202ENST00000391942 SBNO2Q9Y2G9 1366 aa23.81■■□□□ 1.4
ERCC2-202ENST00000391942 TMEM94Q12767 1356 aa23.81■■□□□ 1.4
ERCC2-202ENST00000391942 NALCNQ8IZF0 1738 aa23.81■■□□□ 1.4
ERCC2-202ENST00000391942 TULP4Q9NRJ4 1543 aa23.8■■□□□ 1.4
ERCC2-202ENST00000391942 TMF1P82094 1093 aa23.8■■□□□ 1.4
ERCC2-202ENST00000391942 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
ERCC2-202ENST00000391942 POLR3GLQ9BT43 218 aa23.79■■□□□ 1.4
ERCC2-202ENST00000391942 EVC2Q86UK5 1308 aa23.77■■□□□ 1.4
ERCC2-202ENST00000391942 XIRP1Q702N8 1843 aaKnown RBP23.77■■□□□ 1.4
ERCC2-202ENST00000391942 LTBP4Q8N2S1 1624 aa23.77■■□□□ 1.39
ERCC2-202ENST00000391942 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
ERCC2-202ENST00000391942 ADGRB2O60241 1585 aa23.76■■□□□ 1.39
ERCC2-202ENST00000391942 CDK19Q9BWU1 502 aa23.75■■□□□ 1.39
ERCC2-202ENST00000391942 CABP2Q9NPB3 220 aa23.75■■□□□ 1.39
ERCC2-202ENST00000391942 KIF7Q2M1P5 1343 aa23.74■■□□□ 1.39
ERCC2-202ENST00000391942 WASLO00401 505 aaPredicted RBP23.74■■□□□ 1.39
ERCC2-202ENST00000391942 SLC24A1O60721 1099 aa23.74■■□□□ 1.39
ERCC2-202ENST00000391942 SRPK2P78362 688 aaKnown RBP23.74■■□□□ 1.39
ERCC2-202ENST00000391942 WASHC2AQ641Q2 1341 aa23.73■■□□□ 1.39
ERCC2-202ENST00000391942 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
ERCC2-202ENST00000391942 NUTM2FA1L443 756 aa23.71■■□□□ 1.39
ERCC2-202ENST00000391942 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
ERCC2-202ENST00000391942 CDC42BPGQ6DT37 1551 aa23.69■■□□□ 1.38
ERCC2-202ENST00000391942 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
ERCC2-202ENST00000391942 CDCA8Q53HL2 280 aa23.68■■□□□ 1.38
ERCC2-202ENST00000391942 MSH6P52701 1360 aa23.68■■□□□ 1.38
ERCC2-202ENST00000391942 FMN2Q9NZ56 1722 aa23.67■■□□□ 1.38
ERCC2-202ENST00000391942 ATF3P18847 181 aa23.64■■□□□ 1.38
ERCC2-202ENST00000391942 PRR36Q9H6K5 1346 aa23.64■■□□□ 1.37
ERCC2-202ENST00000391942 NUDT16Q96DE0 195 aaKnown RBP23.63■■□□□ 1.37
ERCC2-202ENST00000391942 USP32Q8NFA0 1604 aa23.63■■□□□ 1.37
ERCC2-202ENST00000391942 RGPD8O14715 1765 aaPredicted RBP23.63■■□□□ 1.37
ERCC2-202ENST00000391942 TMC1Q8TDI8 760 aa23.62■■□□□ 1.37
ERCC2-202ENST00000391942 ATP7BP35670 1465 aa23.62■■□□□ 1.37
ERCC2-202ENST00000391942 MYOM1P52179 1685 aa23.61■■□□□ 1.37
ERCC2-202ENST00000391942 ATAD2Q6PL18 1390 aa23.61■■□□□ 1.37
ERCC2-202ENST00000391942 DCCP43146 1447 aa23.61■■□□□ 1.37
ERCC2-202ENST00000391942 PUS7Q96PZ0 661 aaKnown RBP23.61■■□□□ 1.37
ERCC2-202ENST00000391942 DDX10Q13206 875 aaKnown RBP23.59■■□□□ 1.37
ERCC2-202ENST00000391942 CADPS2Q86UW7 1296 aa23.59■■□□□ 1.37
ERCC2-202ENST00000391942 PPIP5K1Q6PFW1 1433 aa23.58■■□□□ 1.37
ERCC2-202ENST00000391942 ANKARQ7Z5J8 1434 aa23.58■■□□□ 1.37
ERCC2-202ENST00000391942 SLC12A5Q9H2X9 1139 aa23.58■■□□□ 1.37
ERCC2-202ENST00000391942 TOPAZ1Q8N9V7 1692 aa23.58■■□□□ 1.36
ERCC2-202ENST00000391942 CABP1Q9NZU7 370 aa23.57■■□□□ 1.36
ERCC2-202ENST00000391942 MST1RQ04912 1400 aa23.57■■□□□ 1.36
ERCC2-202ENST00000391942 CCDC61Q9Y6R9 512 aa23.56■■□□□ 1.36
ERCC2-202ENST00000391942 ITSN1Q15811 1721 aa23.56■■□□□ 1.36
ERCC2-202ENST00000391942 C1orf167Q5SNV9 1468 aa23.55■■□□□ 1.36
ERCC2-202ENST00000391942 ESCO1Q5FWF5 840 aa23.54■■□□□ 1.36
ERCC2-202ENST00000391942 PMFBP1Q8TBY8 1022 aa23.54■■□□□ 1.36
ERCC2-202ENST00000391942 ORAI2Q96SN7 254 aa23.53■■□□□ 1.36
ERCC2-202ENST00000391942 CERKQ8TCT0 537 aa23.52■■□□□ 1.36
ERCC2-202ENST00000391942 PANK3Q9H999 370 aa23.51■■□□□ 1.35
ERCC2-202ENST00000391942 SLAIN2Q9P270 581 aa23.51■■□□□ 1.35
ERCC2-202ENST00000391942 NINLQ9Y2I6 1382 aa23.51■■□□□ 1.35
ERCC2-202ENST00000391942 PHF8Q9UPP1 1060 aa23.49■■□□□ 1.35
ERCC2-202ENST00000391942 CD163L1Q9NR16 1453 aa23.48■■□□□ 1.35
ERCC2-202ENST00000391942 PLEKHG3A1L390 1219 aa23.48■■□□□ 1.35
ERCC2-202ENST00000391942 ACEP12821 1306 aa23.47■■□□□ 1.35
ERCC2-202ENST00000391942 A0A1W2PP64 1363 aa23.47■■□□□ 1.35
ERCC2-202ENST00000391942 NGDNQ8NEJ9 315 aaKnown RBP23.47■■□□□ 1.35
ERCC2-202ENST00000391942 TERF2IPQ9NYB0 399 aa23.47■■□□□ 1.35
ERCC2-202ENST00000391942 ANKRD36BQ8N2N9 1353 aa23.46■■□□□ 1.35
ERCC2-202ENST00000391942 HDGFL2Q7Z4V5 671 aaPredicted RBP23.46■■□□□ 1.35
ERCC2-202ENST00000391942 IQSEC2Q5JU85 1478 aa23.45■■□□□ 1.35
ERCC2-202ENST00000391942 AKAP12Q02952 1782 aa23.45■■□□□ 1.34
ERCC2-202ENST00000391942 KIF1AQ12756 1690 aa23.44■■□□□ 1.34
ERCC2-202ENST00000391942 UBAP1LF5GYI3 381 aa23.43■■□□□ 1.34
ERCC2-202ENST00000391942 BRINP3Q76B58 766 aa23.43■■□□□ 1.34
ERCC2-202ENST00000391942 CARD14Q9BXL6 1004 aa23.43■■□□□ 1.34
ERCC2-202ENST00000391942 KTN1Q86UP2 1357 aaKnown RBP23.43■■□□□ 1.34
ERCC2-202ENST00000391942 CPSF1Q10570 1443 aaKnown RBP23.43■■□□□ 1.34
ERCC2-202ENST00000391942 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
ERCC2-202ENST00000391942 FOXO3O43524 673 aa23.42■■□□□ 1.34
ERCC2-202ENST00000391942 TOM1O60784 492 aa23.42■■□□□ 1.34
ERCC2-202ENST00000391942 DDX17Q92841 729 aaKnown RBP23.42■■□□□ 1.34
ERCC2-202ENST00000391942 NSD3Q9BZ95 1437 aa23.41■■□□□ 1.34
ERCC2-202ENST00000391942 MON2Q7Z3U7 1717 aa23.4■■□□□ 1.34
ERCC2-202ENST00000391942 PIP4K2BP78356 416 aa23.4■■□□□ 1.34
ERCC2-202ENST00000391942 XPCQ01831 940 aaPredicted RBP23.4■■□□□ 1.34
ERCC2-202ENST00000391942 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
ERCC2-202ENST00000391942 ROBO1Q9Y6N7 1651 aa23.39■■□□□ 1.34
ERCC2-202ENST00000391942 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.34
ERCC2-202ENST00000391942 PSME1Q06323 249 aa23.38■■□□□ 1.33
ERCC2-202ENST00000391942 ZNF692Q9BU19 519 aaPredicted RBP23.38■■□□□ 1.33
ERCC2-202ENST00000391942 PER1O15534 1290 aaPredicted RBP23.37■■□□□ 1.33
ERCC2-202ENST00000391942 KNSTRNQ9Y448 316 aa23.37■■□□□ 1.33
ERCC2-202ENST00000391942 USP6P35125 1406 aa23.37■■□□□ 1.33
ERCC2-202ENST00000391942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.36■■□□□ 1.33
ERCC2-202ENST00000391942 DIEXFQ68CQ4 756 aaKnown RBP23.36■■□□□ 1.33
ERCC2-202ENST00000391942 NRKQ7Z2Y5 1582 aa23.35■■□□□ 1.33
ERCC2-202ENST00000391942 EDC4Q6P2E9 1401 aaKnown RBP23.35■■□□□ 1.33
ERCC2-202ENST00000391942 KRT28Q7Z3Y7 464 aa23.34■■□□□ 1.33
ERCC2-202ENST00000391942 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.33
ERCC2-202ENST00000391942 PAK3O75914 559 aaPredicted RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms