RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SUPT6HQ7KZ85 1726 aaKnown RBP23.98■■□□□ 1.43
SHANK1-203ENST00000391813 NOC3LQ8WTT2 800 aaKnown RBP23.98■■□□□ 1.43
SHANK1-203ENST00000391813 RPGRIP1LQ68CZ1 1315 aa23.97■■□□□ 1.43
SHANK1-203ENST00000391813 PROSER2Q86WR7 435 aaPredicted RBP23.97■■□□□ 1.43
SHANK1-203ENST00000391813 CDK13Q14004 1512 aaKnown RBP23.97■■□□□ 1.43
SHANK1-203ENST00000391813 PDE3AQ14432 1141 aa23.96■■□□□ 1.43
SHANK1-203ENST00000391813 ARGLU1Q9NWB6 273 aaPredicted RBP23.96■■□□□ 1.43
SHANK1-203ENST00000391813 API5Q9BZZ5 524 aaKnown RBP23.96■■□□□ 1.43
SHANK1-203ENST00000391813 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
SHANK1-203ENST00000391813 GRPEL1Q9HAV7 217 aa23.96■■□□□ 1.43
SHANK1-203ENST00000391813 FOXD4L6Q3SYB3 417 aaPredicted RBP23.95■■□□□ 1.42
SHANK1-203ENST00000391813 FOXD4L3Q6VB84 417 aaPredicted RBP23.95■■□□□ 1.42
SHANK1-203ENST00000391813 H3BQV1 296 aa23.95■■□□□ 1.42
SHANK1-203ENST00000391813 IFFO2Q5TF58 517 aa23.95■■□□□ 1.42
SHANK1-203ENST00000391813 RILPL2Q969X0 211 aa23.95■■□□□ 1.42
SHANK1-203ENST00000391813 DAPK1P53355 1430 aa23.94■■□□□ 1.42
SHANK1-203ENST00000391813 RUNDC1Q96C34 613 aa23.94■■□□□ 1.42
SHANK1-203ENST00000391813 TMX4Q9H1E5 349 aaPredicted RBP23.94■■□□□ 1.42
SHANK1-203ENST00000391813 ADGRL1O94910 1474 aa23.92■■□□□ 1.42
SHANK1-203ENST00000391813 A0A0U1RQG5 324 aaPredicted RBP23.92■■□□□ 1.42
SHANK1-203ENST00000391813 ZNF330Q9Y3S2 320 aaPredicted RBP23.92■■□□□ 1.42
SHANK1-203ENST00000391813 C1orf141Q5JVX7 400 aa23.92■■□□□ 1.42
SHANK1-203ENST00000391813 PPP6R1Q9UPN7 881 aa23.92■■□□□ 1.42
SHANK1-203ENST00000391813 ARHGEF11O15085 1522 aa23.92■■□□□ 1.42
SHANK1-203ENST00000391813 KIAA1107Q9UPP5 1409 aa23.91■■□□□ 1.42
SHANK1-203ENST00000391813 FAM184AQ8NB25 1140 aa23.91■■□□□ 1.42
SHANK1-203ENST00000391813 PNISRQ8TF01 805 aaKnown RBP23.91■■□□□ 1.42
SHANK1-203ENST00000391813 RUFY2Q8WXA3 655 aa23.91■■□□□ 1.42
SHANK1-203ENST00000391813 ROCK1Q13464 1354 aa23.91■■□□□ 1.42
SHANK1-203ENST00000391813 LNPKQ9C0E8 428 aa23.91■■□□□ 1.42
SHANK1-203ENST00000391813 CDC45O75419 566 aa23.91■■□□□ 1.42
SHANK1-203ENST00000391813 CDCA7LQ96GN5 454 aa23.91■■□□□ 1.42
SHANK1-203ENST00000391813 IFT57Q9NWB7 429 aa23.91■■□□□ 1.42
SHANK1-203ENST00000391813 MCM4P33991 863 aa23.9■■□□□ 1.42
SHANK1-203ENST00000391813 PANK1Q8TE04 598 aa23.9■■□□□ 1.42
SHANK1-203ENST00000391813 LETM1O95202 739 aaPredicted RBP23.9■■□□□ 1.42
SHANK1-203ENST00000391813 CIZ1Q9ULV3 898 aaPredicted RBP23.9■■□□□ 1.42
SHANK1-203ENST00000391813 GPRASP1Q5JY77 1395 aa23.89■■□□□ 1.42
SHANK1-203ENST00000391813 NOM1Q5C9Z4 860 aaKnown RBP23.89■■□□□ 1.41
SHANK1-203ENST00000391813 MEX3CQ5U5Q3 659 aaKnown RBP23.89■■□□□ 1.41
SHANK1-203ENST00000391813 CAVIN1Q6NZI2 390 aaKnown RBP23.89■■□□□ 1.41
SHANK1-203ENST00000391813 CCAR2Q8N163 923 aaKnown RBP23.89■■□□□ 1.41
SHANK1-203ENST00000391813 KIF14Q15058 1648 aa23.89■■□□□ 1.41
SHANK1-203ENST00000391813 ZKSCAN1P17029 563 aaPredicted RBP23.89■■□□□ 1.41
SHANK1-203ENST00000391813 DENND4BO75064 1496 aaPredicted RBP23.88■■□□□ 1.41
SHANK1-203ENST00000391813 ANKRD30BQ9BXX2 1392 aa23.87■■□□□ 1.41
SHANK1-203ENST00000391813 HOMER1Q86YM7 354 aa23.87■■□□□ 1.41
SHANK1-203ENST00000391813 UBE2Q2Q8WVN8 375 aa23.87■■□□□ 1.41
SHANK1-203ENST00000391813 NINLQ9Y2I6 1382 aa23.87■■□□□ 1.41
SHANK1-203ENST00000391813 ADAMTS8Q9UP79 889 aa23.86■■□□□ 1.41
SHANK1-203ENST00000391813 TPM1P09493 284 aa23.86■■□□□ 1.41
SHANK1-203ENST00000391813 CFAP70Q5T0N1 1121 aa23.86■■□□□ 1.41
SHANK1-203ENST00000391813 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
SHANK1-203ENST00000391813 CCDC70Q6NSX1 233 aa23.86■■□□□ 1.41
SHANK1-203ENST00000391813 SASS6Q6UVJ0 657 aa23.85■■□□□ 1.41
SHANK1-203ENST00000391813 RBM10P98175 930 aaKnown RBP23.85■■□□□ 1.41
SHANK1-203ENST00000391813 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
SHANK1-203ENST00000391813 MCM2P49736 904 aa23.84■■□□□ 1.41
SHANK1-203ENST00000391813 RABEP1Q15276 862 aa23.84■■□□□ 1.41
SHANK1-203ENST00000391813 RNF214Q8ND24 703 aa23.84■■□□□ 1.41
SHANK1-203ENST00000391813 PDZRN3Q9UPQ7 1066 aa23.84■■□□□ 1.41
SHANK1-203ENST00000391813 SMC3Q9UQE7 1217 aa23.84■■□□□ 1.41
SHANK1-203ENST00000391813 TEFQ10587 303 aa23.84■■□□□ 1.41
SHANK1-203ENST00000391813 ELL2O00472 640 aaPredicted RBP23.83■■□□□ 1.41
SHANK1-203ENST00000391813 BICD2Q8TD16 824 aa23.83■■□□□ 1.41
SHANK1-203ENST00000391813 ANO2Q9NQ90 1003 aa23.83■■□□□ 1.41
SHANK1-203ENST00000391813 TSR1Q2NL82 804 aaKnown RBP23.83■■□□□ 1.4
SHANK1-203ENST00000391813 MNS1Q8NEH6 495 aa23.83■■□□□ 1.4
SHANK1-203ENST00000391813 DIAPH1O60610 1272 aaKnown RBP23.82■■□□□ 1.4
SHANK1-203ENST00000391813 TSPY26PQ9H489 355 aa23.82■■□□□ 1.4
SHANK1-203ENST00000391813 PODXL2Q9NZ53 605 aa23.82■■□□□ 1.4
SHANK1-203ENST00000391813 TULP1O00294 542 aaPredicted RBP23.82■■□□□ 1.4
SHANK1-203ENST00000391813 CWC15Q9P013 229 aaKnown RBP23.82■■□□□ 1.4
SHANK1-203ENST00000391813 ZSCAN30Q86W11 494 aa23.82■■□□□ 1.4
SHANK1-203ENST00000391813 ACBD3Q9H3P7 528 aa23.81■■□□□ 1.4
SHANK1-203ENST00000391813 CWC22Q9HCG8 908 aaKnown RBP23.81■■□□□ 1.4
SHANK1-203ENST00000391813 TEX14Q8IWB6 1497 aa23.8■■□□□ 1.4
SHANK1-203ENST00000391813 PCF11O94913 1555 aaKnown RBP23.79■■□□□ 1.4
SHANK1-203ENST00000391813 GORABQ5T7V8 394 aa23.78■■□□□ 1.4
SHANK1-203ENST00000391813 FANCAO15360 1455 aa23.78■■□□□ 1.4
SHANK1-203ENST00000391813 NLRP6P59044 892 aa23.77■■□□□ 1.4
SHANK1-203ENST00000391813 RAPGEF4Q8WZA2 1011 aa23.77■■□□□ 1.4
SHANK1-203ENST00000391813 UQCRHLA0A096LP55 91 aa23.76■■□□□ 1.39
SHANK1-203ENST00000391813 VPS37CA5D8V6 355 aaPredicted RBP23.76■■□□□ 1.39
SHANK1-203ENST00000391813 PRPF40AO75400 957 aaKnown RBP23.76■■□□□ 1.39
SHANK1-203ENST00000391813 UQCRHP07919 91 aa23.76■■□□□ 1.39
SHANK1-203ENST00000391813 RIPK4P57078 832 aa23.76■■□□□ 1.39
SHANK1-203ENST00000391813 RNF20Q5VTR2 975 aa23.76■■□□□ 1.39
SHANK1-203ENST00000391813 HSP90B2PQ58FF3 399 aa23.76■■□□□ 1.39
SHANK1-203ENST00000391813 CAMSAP2Q08AD1 1489 aa23.76■■□□□ 1.39
SHANK1-203ENST00000391813 GTF2E1P29083 439 aaPredicted RBP23.75■■□□□ 1.39
SHANK1-203ENST00000391813 TTC5Q8N0Z6 440 aa23.75■■□□□ 1.39
SHANK1-203ENST00000391813 PDCL3Q9H2J4 239 aa23.75■■□□□ 1.39
SHANK1-203ENST00000391813 ESCO1Q5FWF5 840 aa23.75■■□□□ 1.39
SHANK1-203ENST00000391813 PRAM1Q96QH2 718 aa23.75■■□□□ 1.39
SHANK1-203ENST00000391813 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.75■■□□□ 1.39
SHANK1-203ENST00000391813 ZNF692Q9BU19 519 aaPredicted RBP23.74■■□□□ 1.39
SHANK1-203ENST00000391813 CCDC73Q6ZRK6 1079 aa23.74■■□□□ 1.39
SHANK1-203ENST00000391813 CABP2Q9NPB3 220 aa23.74■■□□□ 1.39
SHANK1-203ENST00000391813 TPD52L1Q16890 204 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms