RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 BMP2KQ9NSY1 1161 aaPredicted RBP3.69□□□□□ -1.82
RNU6-220P-201ENST00000390919 RCCD1A6NED2 376 aa3.68□□□□□ -1.82
RNU6-220P-201ENST00000390919 KDM4AO75164 1064 aa3.68□□□□□ -1.82
RNU6-220P-201ENST00000390919 PLCG2P16885 1265 aa3.68□□□□□ -1.82
RNU6-220P-201ENST00000390919 USP46P62068 366 aa3.68□□□□□ -1.82
RNU6-220P-201ENST00000390919 CTDSPL2Q05D32 466 aa3.68□□□□□ -1.82
RNU6-220P-201ENST00000390919 LARP1Q6PKG0 1096 aaKnown RBP3.68□□□□□ -1.82
RNU6-220P-201ENST00000390919 STK32AQ8WU08 396 aa3.68□□□□□ -1.82
RNU6-220P-201ENST00000390919 JPH4Q96JJ6 628 aa3.68□□□□□ -1.82
RNU6-220P-201ENST00000390919 HMX1Q9NP08 348 aaPredicted RBP3.68□□□□□ -1.82
RNU6-220P-201ENST00000390919 ANKRD33BA6NCL7 494 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 FDX1P10109 184 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 VAMP1P23763 118 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 DNAJB2P25686 324 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 PRSS12P56730 875 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 MTMR2Q13614 643 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 NAALADL2Q58DX5 795 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 C6orf132Q5T0Z8 1188 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 TRIM34Q9BYJ4 488 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 ZMIZ1Q9ULJ6 1067 aa3.67□□□□□ -1.82
RNU6-220P-201ENST00000390919 ANKRD62A6NC57 917 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 USP17L3A6NCW0 530 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 USP17L4A6NCW7 530 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 ATP2B4P23634 1241 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 SSFA2P28290 1259 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 IER5LQ5T953 404 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 USP17L2Q6R6M4 530 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 USP17L1Q7RTZ2 530 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 SLF2Q8IX21 1173 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 NFATC2IPQ8NCF5 419 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 FAM200AQ8TCP9 573 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 LRRN4Q8WUT4 740 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 CDCA7LQ96GN5 454 aa3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 ARID4BQ4LE39 1312 aaPredicted RBP3.66□□□□□ -1.82
RNU6-220P-201ENST00000390919 FAM196BA6NMK8 535 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L15C9J2P7 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L10C9JJH3 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L13C9JLJ4 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L12C9JPN9 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L11C9JVI0 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L21D6R901 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L18D6R9N7 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L22D6RA61 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L17D6RBQ6 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L19D6RCP7 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L20D6RJB6 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 SLC34A2O95436 690 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 SKIP12755 728 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 ERCC5P28715 1186 aaPredicted RBP3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 SERPINB4P48594 390 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 IRX5P78411 483 aaPredicted RBP3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L24Q0WX57 530 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 TSNAXIP1Q2TAA8 658 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 KANK4Q5T7N3 995 aaPredicted RBP3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 NPAS4Q8IUM7 802 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 ZSCAN29Q8IWY8 852 aaPredicted RBP3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 TTC13Q8NBP0 860 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 CLP1Q92989 425 aaKnown RBP3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 ZDHHC16Q969W1 377 aa3.65□□□□□ -1.83
RNU6-220P-201ENST00000390919 USP17L5A8MUK1 530 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 NBPF26B4DH59 902 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 C6orf229H3BNL8 230 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 HOXA2O43364 376 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 GPR37L1O60883 481 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 ABL1P00519 1130 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 RASA1P20936 1047 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 MAPK1P28482 360 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 ITGAEP38570 1179 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 NR1H3Q13133 447 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 PHLDB3Q6NSJ2 640 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 TMEM92Q6UXU6 159 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 C3orf67Q6ZVT6 689 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 ZNF454Q8N9F8 522 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 ZNF592Q92610 1267 aa3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 CDCA7Q9BWT1 371 aaPredicted RBP3.64□□□□□ -1.83
RNU6-220P-201ENST00000390919 ATP5J2-PTCD1G3V325 749 aa3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 H3BRB1 525 aa3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 FOSBP53539 338 aa3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 NR6A1Q15406 480 aa3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 SWI5Q1ZZU3 235 aa3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 GRIPAP1Q4V328 841 aa3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 GLYCTKQ8IVS8 523 aa3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 PLEKHM2Q8IWE5 1019 aa3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 HIRIP3Q9BW71 556 aaPredicted RBP3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 TUT1Q9H6E5 874 aaKnown RBP3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 TMEM134Q9H6X4 195 aa3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 CWC22Q9HCG8 908 aaKnown RBP3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 MKRN1Q9UHC7 482 aaKnown RBP3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 RBM19Q9Y4C8 960 aaKnown RBP3.63□□□□□ -1.83
RNU6-220P-201ENST00000390919 LZTS3O60299 673 aaPredicted RBP3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 SEC24BO95487 1268 aa3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 RECKO95980 971 aa3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 SLC4A3P48751 1232 aa3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 SLFNL1Q499Z3 407 aa3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 EAPPQ56P03 285 aaPredicted RBP3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 NUDT18Q6ZVK8 323 aa3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 ANKMY2Q8IV38 441 aa3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 DEPDC4Q8N2C3 294 aa3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 PIP4P2Q8N4L2 257 aa3.62□□□□□ -1.83
RNU6-220P-201ENST00000390919 EPS8L1Q8TE68 723 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms