RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 MAN1A2O60476 641 aa0.85□□□□□ -2.27
RNU6-258P-201ENST00000390884 PYGBP11216 843 aa0.85□□□□□ -2.27
RNU6-258P-201ENST00000390884 FAM98CQ17RN3 349 aaKnown RBP0.85□□□□□ -2.27
RNU6-258P-201ENST00000390884 NKAPLQ5M9Q1 402 aa0.85□□□□□ -2.27
RNU6-258P-201ENST00000390884 GPR161Q8N6U8 529 aaKnown RBP0.85□□□□□ -2.27
RNU6-258P-201ENST00000390884 ZFP42Q96MM3 310 aa0.85□□□□□ -2.27
RNU6-258P-201ENST00000390884 TBC1D12O60347 775 aa0.84□□□□□ -2.27
RNU6-258P-201ENST00000390884 ZPR1O75312 459 aa0.84□□□□□ -2.27
RNU6-258P-201ENST00000390884 CHRNA4P43681 627 aa0.84□□□□□ -2.27
RNU6-258P-201ENST00000390884 RNFT1Q5M7Z0 435 aa0.84□□□□□ -2.27
RNU6-258P-201ENST00000390884 TRIM46Q7Z4K8 759 aa0.84□□□□□ -2.27
RNU6-258P-201ENST00000390884 SEPT9Q9UHD8 586 aaPredicted RBP0.84□□□□□ -2.27
RNU6-258P-201ENST00000390884 SOBPA7XYQ1 873 aa0.83□□□□□ -2.28
RNU6-258P-201ENST00000390884 J3QL48 77 aa0.83□□□□□ -2.28
RNU6-258P-201ENST00000390884 CAPN5O15484 640 aaPredicted RBP0.83□□□□□ -2.28
RNU6-258P-201ENST00000390884 RPIAP49247 311 aa0.83□□□□□ -2.28
RNU6-258P-201ENST00000390884 CTSWP56202 376 aa0.83□□□□□ -2.28
RNU6-258P-201ENST00000390884 SRSF11Q05519 484 aaKnown RBP0.83□□□□□ -2.28
RNU6-258P-201ENST00000390884 ERFEQ4G0M1 354 aa0.83□□□□□ -2.28
RNU6-258P-201ENST00000390884 MICALL1Q8N3F8 863 aa0.83□□□□□ -2.28
RNU6-258P-201ENST00000390884 RAPGEFL1Q9UHV5 662 aa0.83□□□□□ -2.28
RNU6-258P-201ENST00000390884 S1PR4O95977 384 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 ATXN8OSP0DMR3 200 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 COL8A1P27658 744 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 ZNF124Q15973 351 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 BHLHA9Q7RTU4 235 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 MIER1Q8N108 512 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 NECTIN2Q92692 538 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 ASIC4Q96FT7 647 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 RRAGCQ9HB90 399 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 KIAA1468Q9P260 1216 aa0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 OAS3Q9Y6K5 1087 aaKnown RBP0.82□□□□□ -2.28
RNU6-258P-201ENST00000390884 BCRP11274 1271 aa0.81□□□□□ -2.28
RNU6-258P-201ENST00000390884 GP2P55259 537 aaKnown RBP0.81□□□□□ -2.28
RNU6-258P-201ENST00000390884 PROX2Q3B8N5 592 aa0.81□□□□□ -2.28
RNU6-258P-201ENST00000390884 NOP53Q9NZM5 478 aaKnown RBP0.81□□□□□ -2.28
RNU6-258P-201ENST00000390884 ZBTB47Q9UFB7 747 aaPredicted RBP0.81□□□□□ -2.28
RNU6-258P-201ENST00000390884 CDC14CA4D256 554 aa0.8□□□□□ -2.28
RNU6-258P-201ENST00000390884 PPP1R3GB7ZBB8 358 aa0.8□□□□□ -2.28
RNU6-258P-201ENST00000390884 RNF40O75150 1001 aa0.8□□□□□ -2.28
RNU6-258P-201ENST00000390884 SV2AQ7L0J3 742 aa0.8□□□□□ -2.28
RNU6-258P-201ENST00000390884 GGNQ86UU5 652 aa0.8□□□□□ -2.28
RNU6-258P-201ENST00000390884 ZSCAN18Q8TBC5 510 aaPredicted RBP0.8□□□□□ -2.28
RNU6-258P-201ENST00000390884 MENTQ9BUN1 341 aa0.8□□□□□ -2.28
RNU6-258P-201ENST00000390884 TPSG1Q9NRR2 321 aa0.8□□□□□ -2.28
RNU6-258P-201ENST00000390884 RNF112Q9ULX5 631 aa0.8□□□□□ -2.28
RNU6-258P-201ENST00000390884 KRTAP29-1A8MX34 341 aaPredicted RBP0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 OSBPP22059 807 aa0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 KRTAP10-6P60371 365 aaPredicted RBP0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 ZNF648Q5T619 568 aaPredicted RBP0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 TTLL10Q6ZVT0 673 aa0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 RIC3Q7Z5B4 369 aa0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 SH3RF1Q7Z6J0 888 aa0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 NANOS1Q8WY41 292 aaKnown RBP0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 SLC4A9Q96Q91 983 aa0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 REPIN1Q9BWE0 567 aaKnown RBP0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 BRIP1Q9BX63 1249 aa0.79□□□□□ -2.28
RNU6-258P-201ENST00000390884 WNT7AO00755 349 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 ZBTB24O43167 697 aaPredicted RBP0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 HDGFP51858 240 aaKnown RBP0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 HNRNPA0Q13151 305 aaKnown RBP0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 PDAP1Q13442 181 aaKnown RBP0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 PLA2G2CQ5R387 149 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 LCE1EQ5T753 118 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 KSR1Q8IVT5 923 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 TMC2Q8TDI7 906 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 RELTQ969Z4 430 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 VWCEQ96DN2 955 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 TOX2Q96NM4 488 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 PURBQ96QR8 312 aaKnown RBP0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 SLC38A3Q99624 504 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 SRRDQ9UH36 339 aa0.78□□□□□ -2.28
RNU6-258P-201ENST00000390884 ONECUT3O60422 494 aaPredicted RBP0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 H2AFB1P0C5Y9 115 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 H2AFB2P0C5Z0 115 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 TGM1P22735 817 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 LMO1P25800 156 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 SSTR4P31391 388 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 APLP1P51693 650 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 SNRPNP63162 240 aaKnown RBP0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 MRPL14Q6P1L8 145 aaKnown RBP0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 VWA5B2Q8N398 1253 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 PTCD2Q8WV60 388 aaKnown RBP0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 MYRFLQ96LU7 910 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 LMCD1Q9NZU5 365 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 SALL3Q9BXA9 1300 aa0.77□□□□□ -2.29
RNU6-258P-201ENST00000390884 SENP3-EIF4A1A0A087X0R7 540 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 ADH1BP00325 375 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 HMGA2P52926 109 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 NUBP1P53384 320 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 CSRP2Q16527 193 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 NBPF20Q3BBV1 942 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 NBPF10Q6P3W6 841 aaKnown RBP0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 SAMD7Q7Z3H4 446 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 ZDHHC16Q969W1 377 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 ZNF764Q96H86 408 aaPredicted RBP0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 MRGPRX2Q96LB1 330 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 PRR14Q9BWN1 585 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 SLC6A16Q9GZN6 736 aa0.76□□□□□ -2.29
RNU6-258P-201ENST00000390884 LRRC4BQ9NT99 713 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms