RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
TRAV13-1-201ENST00000390436 NUTM2AQ8IVF1 878 aaPredicted RBP10.36□□□□□ -0.75
TRAV13-1-201ENST00000390436 SPOCK2Q92563 424 aa10.36□□□□□ -0.75
TRAV13-1-201ENST00000390436 AMOTL2Q9Y2J4 779 aa10.36□□□□□ -0.75
TRAV13-1-201ENST00000390436 TRPM2O94759 1503 aa10.36□□□□□ -0.75
TRAV13-1-201ENST00000390436 RGS12O14924 1447 aa10.35□□□□□ -0.75
TRAV13-1-201ENST00000390436 SPHKAPQ2M3C7 1700 aa10.35□□□□□ -0.75
TRAV13-1-201ENST00000390436 CLTCL1P53675 1640 aa10.34□□□□□ -0.75
TRAV13-1-201ENST00000390436 PLEKHG5O94827 1062 aa10.34□□□□□ -0.75
TRAV13-1-201ENST00000390436 PPARGC1BQ86YN6 1023 aaKnown RBP10.34□□□□□ -0.75
TRAV13-1-201ENST00000390436 SRCAPQ6ZRS2 3230 aa10.34□□□□□ -0.75
TRAV13-1-201ENST00000390436 AFF2P51816 1311 aa10.33□□□□□ -0.76
TRAV13-1-201ENST00000390436 PPP1R15AO75807 674 aaPredicted RBP10.33□□□□□ -0.76
TRAV13-1-201ENST00000390436 C19orf44Q9H6X5 657 aa10.33□□□□□ -0.76
TRAV13-1-201ENST00000390436 SETBP1Q9Y6X0 1596 aa10.33□□□□□ -0.76
TRAV13-1-201ENST00000390436 NCOA3Q9Y6Q9 1424 aa10.33□□□□□ -0.76
TRAV13-1-201ENST00000390436 SPATA31A6Q5VVP1 1343 aa10.33□□□□□ -0.76
TRAV13-1-201ENST00000390436 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
TRAV13-1-201ENST00000390436 NEXMIFQ5QGS0 1516 aa10.32□□□□□ -0.76
TRAV13-1-201ENST00000390436 SETD5Q9C0A6 1442 aa10.32□□□□□ -0.76
TRAV13-1-201ENST00000390436 PNPLA6Q8IY17 1366 aa10.31□□□□□ -0.76
TRAV13-1-201ENST00000390436 C14orf37Q86TY3 774 aa10.31□□□□□ -0.76
TRAV13-1-201ENST00000390436 ZBTB47Q9UFB7 747 aaPredicted RBP10.31□□□□□ -0.76
TRAV13-1-201ENST00000390436 LAMC1P11047 1609 aa10.3□□□□□ -0.76
TRAV13-1-201ENST00000390436 MEX3CQ5U5Q3 659 aaKnown RBP10.3□□□□□ -0.76
TRAV13-1-201ENST00000390436 RXRBP28702 533 aa10.29□□□□□ -0.76
TRAV13-1-201ENST00000390436 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
TRAV13-1-201ENST00000390436 ORAI2Q96SN7 254 aa10.29□□□□□ -0.76
TRAV13-1-201ENST00000390436 EP400Q96L91 3159 aa10.28□□□□□ -0.76
TRAV13-1-201ENST00000390436 NUP155O75694 1391 aa10.28□□□□□ -0.76
TRAV13-1-201ENST00000390436 PIK3R4Q99570 1358 aa10.28□□□□□ -0.76
TRAV13-1-201ENST00000390436 ATF3P18847 181 aa10.28□□□□□ -0.76
TRAV13-1-201ENST00000390436 ITGAEP38570 1179 aa10.28□□□□□ -0.76
TRAV13-1-201ENST00000390436 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
TRAV13-1-201ENST00000390436 CDK12Q9NYV4 1490 aaPredicted RBP10.28□□□□□ -0.76
TRAV13-1-201ENST00000390436 ROBO2Q9HCK4 1378 aa10.27□□□□□ -0.76
TRAV13-1-201ENST00000390436 ADGRL3Q9HAR2 1447 aa10.27□□□□□ -0.77
TRAV13-1-201ENST00000390436 BRWD3Q6RI45 1802 aa10.27□□□□□ -0.77
TRAV13-1-201ENST00000390436 DCCP43146 1447 aa10.26□□□□□ -0.77
TRAV13-1-201ENST00000390436 C1orf167Q5SNV9 1468 aa10.26□□□□□ -0.77
TRAV13-1-201ENST00000390436 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
TRAV13-1-201ENST00000390436 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.26□□□□□ -0.77
TRAV13-1-201ENST00000390436 C8orf37Q96NL8 207 aa10.26□□□□□ -0.77
TRAV13-1-201ENST00000390436 QTRT2Q9H974 415 aaKnown RBP10.26□□□□□ -0.77
TRAV13-1-201ENST00000390436 MARF1Q9Y4F3 1742 aaKnown RBP10.26□□□□□ -0.77
TRAV13-1-201ENST00000390436 KIF1BO60333 1816 aa10.26□□□□□ -0.77
TRAV13-1-201ENST00000390436 ROCK1Q13464 1354 aa10.26□□□□□ -0.77
TRAV13-1-201ENST00000390436 RGPD8O14715 1765 aaPredicted RBP10.25□□□□□ -0.77
TRAV13-1-201ENST00000390436 PPLO60437 1756 aa10.25□□□□□ -0.77
TRAV13-1-201ENST00000390436 ADAMTS2O95450 1211 aa10.25□□□□□ -0.77
TRAV13-1-201ENST00000390436 COL22A1Q8NFW1 1626 aaPredicted RBP10.24□□□□□ -0.77
TRAV13-1-201ENST00000390436 XPCQ01831 940 aaPredicted RBP10.22□□□□□ -0.77
TRAV13-1-201ENST00000390436 SOS2Q07890 1332 aaPredicted RBP10.22□□□□□ -0.77
TRAV13-1-201ENST00000390436 HDGFP51858 240 aaKnown RBP10.21□□□□□ -0.77
TRAV13-1-201ENST00000390436 RBM6P78332 1123 aaKnown RBP10.21□□□□□ -0.77
TRAV13-1-201ENST00000390436 LRRC59Q96AG4 307 aaKnown RBP10.21□□□□□ -0.77
TRAV13-1-201ENST00000390436 ATRNO75882 1429 aa10.21□□□□□ -0.78
TRAV13-1-201ENST00000390436 BCL9LQ86UU0 1499 aa10.21□□□□□ -0.78
TRAV13-1-201ENST00000390436 GLI3P10071 1580 aa10.21□□□□□ -0.78
TRAV13-1-201ENST00000390436 NUBP1P53384 320 aa10.2□□□□□ -0.78
TRAV13-1-201ENST00000390436 MYOM2P54296 1465 aa10.2□□□□□ -0.78
TRAV13-1-201ENST00000390436 ZNF326Q5BKZ1 582 aaKnown RBP10.2□□□□□ -0.78
TRAV13-1-201ENST00000390436 PXDNQ92626 1479 aa10.2□□□□□ -0.78
TRAV13-1-201ENST00000390436 PLEKHH1Q9ULM0 1364 aa10.19□□□□□ -0.78
TRAV13-1-201ENST00000390436 CHADLQ6NUI6 762 aa10.19□□□□□ -0.78
TRAV13-1-201ENST00000390436 NGLY1Q96IV0 654 aa10.19□□□□□ -0.78
TRAV13-1-201ENST00000390436 IFT172Q9UG01 1749 aa10.19□□□□□ -0.78
TRAV13-1-201ENST00000390436 NAIPQ13075 1403 aa10.18□□□□□ -0.78
TRAV13-1-201ENST00000390436 FNBP4Q8N3X1 1017 aaPredicted RBP10.18□□□□□ -0.78
TRAV13-1-201ENST00000390436 PTCH1Q13635 1447 aa10.17□□□□□ -0.78
TRAV13-1-201ENST00000390436 NUTM2FA1L443 756 aa10.17□□□□□ -0.78
TRAV13-1-201ENST00000390436 FXR2P51116 673 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRAV13-1-201ENST00000390436 CHRDL2Q6WN34 429 aa10.17□□□□□ -0.78
TRAV13-1-201ENST00000390436 WAPLQ7Z5K2 1190 aa10.17□□□□□ -0.78
TRAV13-1-201ENST00000390436 USP21Q9UK80 565 aa10.17□□□□□ -0.78
TRAV13-1-201ENST00000390436 PRAG1Q86YV5 1406 aa10.16□□□□□ -0.78
TRAV13-1-201ENST00000390436 ABCA3Q99758 1704 aa10.16□□□□□ -0.78
TRAV13-1-201ENST00000390436 ADGRF5Q8IZF2 1346 aa10.16□□□□□ -0.78
TRAV13-1-201ENST00000390436 FMN2Q9NZ56 1722 aa10.16□□□□□ -0.78
TRAV13-1-201ENST00000390436 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.78
TRAV13-1-201ENST00000390436 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.15□□□□□ -0.78
TRAV13-1-201ENST00000390436 CDC42BPGQ6DT37 1551 aa10.14□□□□□ -0.79
TRAV13-1-201ENST00000390436 FOXO3O43524 673 aa10.14□□□□□ -0.79
TRAV13-1-201ENST00000390436 ECM2O94769 699 aaPredicted RBP10.14□□□□□ -0.79
TRAV13-1-201ENST00000390436 PLCH1Q4KWH8 1693 aa10.13□□□□□ -0.79
TRAV13-1-201ENST00000390436 PRKAR2AP13861 404 aaKnown RBP10.13□□□□□ -0.79
TRAV13-1-201ENST00000390436 TMEM132EQ6IEE7 984 aa10.13□□□□□ -0.79
TRAV13-1-201ENST00000390436 DEFB132Q7Z7B7 95 aa10.13□□□□□ -0.79
TRAV13-1-201ENST00000390436 SLIT2O94813 1529 aa10.12□□□□□ -0.79
TRAV13-1-201ENST00000390436 RALGAPBQ86X10 1494 aa10.12□□□□□ -0.79
TRAV13-1-201ENST00000390436 USP32Q8NFA0 1604 aa10.12□□□□□ -0.79
TRAV13-1-201ENST00000390436 CABLES1Q8TDN4 633 aa10.12□□□□□ -0.79
TRAV13-1-201ENST00000390436 KNDC1Q76NI1 1749 aa10.12□□□□□ -0.79
TRAV13-1-201ENST00000390436 ATAD2Q6PL18 1390 aa10.12□□□□□ -0.79
TRAV13-1-201ENST00000390436 RRBP1Q9P2E9 1410 aaKnown RBP10.11□□□□□ -0.79
TRAV13-1-201ENST00000390436 ESCO1Q5FWF5 840 aa10.11□□□□□ -0.79
TRAV13-1-201ENST00000390436 STK26Q9P289 416 aa10.11□□□□□ -0.79
TRAV13-1-201ENST00000390436 TRPC5Q9UL62 973 aaPredicted RBP10.11□□□□□ -0.79
TRAV13-1-201ENST00000390436 SPATA31E1Q6ZUB1 1445 aa10.1□□□□□ -0.79
TRAV13-1-201ENST00000390436 GSE1Q14687 1217 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms