RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 ZNF521Q96K83 1311 aa22.91■■□□□ 1.26
SQSTM1-202ENST00000389805 SLC24A1O60721 1099 aa22.91■■□□□ 1.26
SQSTM1-202ENST00000389805 IDI1Q13907 227 aa22.9■■□□□ 1.26
SQSTM1-202ENST00000389805 C8orf34Q49A92 452 aa22.89■■□□□ 1.25
SQSTM1-202ENST00000389805 FAM161AQ3B820 660 aa22.89■■□□□ 1.25
SQSTM1-202ENST00000389805 CFAP74Q9C0B2 1584 aa22.88■■□□□ 1.25
SQSTM1-202ENST00000389805 YEATS2Q9ULM3 1422 aa22.87■■□□□ 1.25
SQSTM1-202ENST00000389805 RSPH6AQ9H0K4 717 aa22.87■■□□□ 1.25
SQSTM1-202ENST00000389805 DMRT2Q9Y5R5 561 aa22.87■■□□□ 1.25
SQSTM1-202ENST00000389805 FAM43AQ8N2R8 423 aa22.86■■□□□ 1.25
SQSTM1-202ENST00000389805 NSD3Q9BZ95 1437 aa22.86■■□□□ 1.25
SQSTM1-202ENST00000389805 ARXQ96QS3 562 aa22.86■■□□□ 1.25
SQSTM1-202ENST00000389805 SBNO2Q9Y2G9 1366 aa22.86■■□□□ 1.25
SQSTM1-202ENST00000389805 SIGLEC1Q9BZZ2 1709 aa22.86■■□□□ 1.25
SQSTM1-202ENST00000389805 SLFN5Q08AF3 891 aa22.86■■□□□ 1.25
SQSTM1-202ENST00000389805 MORC1Q86VD1 984 aa22.86■■□□□ 1.25
SQSTM1-202ENST00000389805 STK26Q9P289 416 aa22.86■■□□□ 1.25
SQSTM1-202ENST00000389805 ADGRB1O14514 1584 aa22.85■■□□□ 1.25
SQSTM1-202ENST00000389805 PPLO60437 1756 aa22.85■■□□□ 1.25
SQSTM1-202ENST00000389805 RPGRIP1LQ68CZ1 1315 aa22.85■■□□□ 1.25
SQSTM1-202ENST00000389805 KDM2BQ8NHM5 1336 aa22.84■■□□□ 1.25
SQSTM1-202ENST00000389805 NEO1Q92859 1461 aa22.84■■□□□ 1.25
SQSTM1-202ENST00000389805 POGKQ9P215 609 aa22.84■■□□□ 1.25
SQSTM1-202ENST00000389805 VGFO15240 615 aaPredicted RBP22.83■■□□□ 1.25
SQSTM1-202ENST00000389805 CABP2Q9NPB3 220 aa22.82■■□□□ 1.24
SQSTM1-202ENST00000389805 SETBP1Q9Y6X0 1596 aa22.82■■□□□ 1.24
SQSTM1-202ENST00000389805 CENPQQ7L2Z9 268 aaPredicted RBP22.82■■□□□ 1.24
SQSTM1-202ENST00000389805 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
SQSTM1-202ENST00000389805 DIP2CQ9Y2E4 1556 aa22.81■■□□□ 1.24
SQSTM1-202ENST00000389805 FBXO31Q5XUX0 539 aaPredicted RBP22.81■■□□□ 1.24
SQSTM1-202ENST00000389805 CAMSAP1Q5T5Y3 1602 aa22.81■■□□□ 1.24
SQSTM1-202ENST00000389805 MYO3AQ8NEV4 1616 aa22.81■■□□□ 1.24
SQSTM1-202ENST00000389805 RRP7AQ9Y3A4 280 aaKnown RBP22.79■■□□□ 1.24
SQSTM1-202ENST00000389805 QRICH2Q9H0J4 1663 aa22.78■■□□□ 1.24
SQSTM1-202ENST00000389805 BCAR3O75815 825 aa22.78■■□□□ 1.24
SQSTM1-202ENST00000389805 TRMT2AQ8IZ69 625 aaKnown RBP22.78■■□□□ 1.24
SQSTM1-202ENST00000389805 RRAGDQ9NQL2 400 aaPredicted RBP22.77■■□□□ 1.24
SQSTM1-202ENST00000389805 SLKQ9H2G2 1235 aaPredicted RBP22.77■■□□□ 1.24
SQSTM1-202ENST00000389805 MTHFSP49914 203 aa22.77■■□□□ 1.23
SQSTM1-202ENST00000389805 FAM69CQ0P6D2 419 aa22.75■■□□□ 1.23
SQSTM1-202ENST00000389805 EVC2Q86UK5 1308 aa22.75■■□□□ 1.23
SQSTM1-202ENST00000389805 POLR3AO14802 1390 aaPredicted RBP22.74■■□□□ 1.23
SQSTM1-202ENST00000389805 NEXMIFQ5QGS0 1516 aa22.74■■□□□ 1.23
SQSTM1-202ENST00000389805 GLI2P10070 1586 aa22.73■■□□□ 1.23
SQSTM1-202ENST00000389805 WWC1Q8IX03 1113 aa22.72■■□□□ 1.23
SQSTM1-202ENST00000389805 RICTORQ6R327 1708 aa22.72■■□□□ 1.23
SQSTM1-202ENST00000389805 SLC52A1Q9NWF4 448 aa22.72■■□□□ 1.23
SQSTM1-202ENST00000389805 CGNL1Q0VF96 1302 aa22.71■■□□□ 1.23
SQSTM1-202ENST00000389805 E9PSI1 815 aa22.71■■□□□ 1.23
SQSTM1-202ENST00000389805 PIK3C2BO00750 1634 aa22.71■■□□□ 1.23
SQSTM1-202ENST00000389805 SRPK2P78362 688 aaKnown RBP22.71■■□□□ 1.23
SQSTM1-202ENST00000389805 ZC3H13Q5T200 1668 aaKnown RBP22.7■■□□□ 1.22
SQSTM1-202ENST00000389805 MINK1Q8N4C8 1332 aaPredicted RBP22.7■■□□□ 1.22
SQSTM1-202ENST00000389805 TULP4Q9NRJ4 1543 aa22.69■■□□□ 1.22
SQSTM1-202ENST00000389805 ARHGAP31Q2M1Z3 1444 aa22.69■■□□□ 1.22
SQSTM1-202ENST00000389805 TCP11L2Q8N4U5 519 aa22.68■■□□□ 1.22
SQSTM1-202ENST00000389805 NKTRP30414 1462 aaKnown RBP22.68■■□□□ 1.22
SQSTM1-202ENST00000389805 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.68■■□□□ 1.22
SQSTM1-202ENST00000389805 SEC24BO95487 1268 aa22.67■■□□□ 1.22
SQSTM1-202ENST00000389805 PRAM1Q96QH2 718 aa22.67■■□□□ 1.22
SQSTM1-202ENST00000389805 MLECQ14165 292 aa22.65■■□□□ 1.22
SQSTM1-202ENST00000389805 RUNDC1Q96C34 613 aa22.65■■□□□ 1.22
SQSTM1-202ENST00000389805 GGNBP2Q9H3C7 697 aa22.65■■□□□ 1.22
SQSTM1-202ENST00000389805 STAG3Q9UJ98 1225 aa22.65■■□□□ 1.22
SQSTM1-202ENST00000389805 MYO5BQ9ULV0 1848 aa22.65■■□□□ 1.22
SQSTM1-202ENST00000389805 ANKRD36BQ8N2N9 1353 aa22.64■■□□□ 1.22
SQSTM1-202ENST00000389805 ARHGEF28Q8N1W1 1705 aaKnown RBP22.64■■□□□ 1.22
SQSTM1-202ENST00000389805 PKNOX2Q96KN3 472 aa22.64■■□□□ 1.21
SQSTM1-202ENST00000389805 NAP1L5Q96NT1 182 aaPredicted RBP22.62■■□□□ 1.21
SQSTM1-202ENST00000389805 USP19O94966 1318 aa22.62■■□□□ 1.21
SQSTM1-202ENST00000389805 U2AF1L5P0DN76 240 aaPredicted RBP22.62■■□□□ 1.21
SQSTM1-202ENST00000389805 U2AF1Q01081 240 aaKnown RBP eCLIP22.62■■□□□ 1.212e-7■□□□□ 8.7
SQSTM1-202ENST00000389805 A0A1W2PP64 1363 aa22.62■■□□□ 1.21
SQSTM1-202ENST00000389805 SHPRHQ149N8 1683 aa22.61■■□□□ 1.21
SQSTM1-202ENST00000389805 CFAP53Q96M91 514 aa22.61■■□□□ 1.21
SQSTM1-202ENST00000389805 IGHDP01880 384 aa22.6■■□□□ 1.21
SQSTM1-202ENST00000389805 SPRYD3Q8NCJ5 442 aa22.6■■□□□ 1.21
SQSTM1-202ENST00000389805 GZF1Q9H116 711 aaPredicted RBP22.6■■□□□ 1.21
SQSTM1-202ENST00000389805 PANK1Q8TE04 598 aa22.59■■□□□ 1.21
SQSTM1-202ENST00000389805 PUS7Q96PZ0 661 aaKnown RBP22.59■■□□□ 1.21
SQSTM1-202ENST00000389805 TSPOAP1O95153 1857 aa22.58■■□□□ 1.21
SQSTM1-202ENST00000389805 BCL2L13Q9BXK5 485 aa22.58■■□□□ 1.21
SQSTM1-202ENST00000389805 ZFYVE9O95405 1425 aa22.58■■□□□ 1.2
SQSTM1-202ENST00000389805 NGEFQ8N5V2 710 aa22.58■■□□□ 1.2
SQSTM1-202ENST00000389805 TMEM131LA2VDJ0 1609 aa22.58■■□□□ 1.2
SQSTM1-202ENST00000389805 PREX1Q8TCU6 1659 aa22.57■■□□□ 1.2
SQSTM1-202ENST00000389805 VSIG10Q8N0Z9 540 aa22.57■■□□□ 1.2
SQSTM1-202ENST00000389805 COG6Q9Y2V7 657 aa22.57■■□□□ 1.2
SQSTM1-202ENST00000389805 CANXP27824 592 aaKnown RBP22.56■■□□□ 1.2
SQSTM1-202ENST00000389805 L1TD1Q5T7N2 865 aaKnown RBP22.56■■□□□ 1.2
SQSTM1-202ENST00000389805 WAPLQ7Z5K2 1190 aa22.56■■□□□ 1.2
SQSTM1-202ENST00000389805 YTHDC2Q9H6S0 1430 aaKnown RBP22.56■■□□□ 1.2
SQSTM1-202ENST00000389805 U2SURPO15042 1029 aaKnown RBP22.56■■□□□ 1.2
SQSTM1-202ENST00000389805 FYB1O15117 783 aa22.56■■□□□ 1.2
SQSTM1-202ENST00000389805 PANK2Q9BZ23 570 aa22.56■■□□□ 1.2
SQSTM1-202ENST00000389805 BECN1Q14457 450 aa22.55■■□□□ 1.2
SQSTM1-202ENST00000389805 TNNQ9UQP3 1299 aa22.55■■□□□ 1.2
SQSTM1-202ENST00000389805 PTPRMP28827 1452 aa22.55■■□□□ 1.2
SQSTM1-202ENST00000389805 FBLN1P23142 703 aa22.55■■□□□ 1.2
SQSTM1-202ENST00000389805 CDK19Q9BWU1 502 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms