RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 KIAA1107Q9UPP5 1409 aa13.54□□□□□ -0.24
LAMA4-205ENST00000389463 DZIP1LQ8IYY4 767 aaKnown RBP13.54□□□□□ -0.24
LAMA4-205ENST00000389463 MTHFSP49914 203 aa13.53□□□□□ -0.24
LAMA4-205ENST00000389463 KIF6Q6ZMV9 814 aa13.53□□□□□ -0.24
LAMA4-205ENST00000389463 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
LAMA4-205ENST00000389463 HSP90AB4PQ58FF6 505 aa13.53□□□□□ -0.24
LAMA4-205ENST00000389463 PLIN1O60240 522 aa13.53□□□□□ -0.24
LAMA4-205ENST00000389463 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
LAMA4-205ENST00000389463 SF3A1Q15459 793 aaKnown RBP13.52□□□□□ -0.25
LAMA4-205ENST00000389463 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
LAMA4-205ENST00000389463 DAPK1P53355 1430 aa13.52□□□□□ -0.25
LAMA4-205ENST00000389463 CABP1Q9NZU7 370 aa13.52□□□□□ -0.25
LAMA4-205ENST00000389463 CDK13Q14004 1512 aaKnown RBP13.51□□□□□ -0.25
LAMA4-205ENST00000389463 CUL7Q14999 1698 aa13.51□□□□□ -0.25
LAMA4-205ENST00000389463 FAM184AQ8NB25 1140 aa13.51□□□□□ -0.25
LAMA4-205ENST00000389463 PRDM11Q9NQV5 511 aa13.51□□□□□ -0.25
LAMA4-205ENST00000389463 ZBED9Q6R2W3 1325 aa13.51□□□□□ -0.25
LAMA4-205ENST00000389463 EPRSP07814 1512 aaKnown RBP13.51□□□□□ -0.25
LAMA4-205ENST00000389463 H3BQV1 296 aa13.51□□□□□ -0.25
LAMA4-205ENST00000389463 IFFO2Q5TF58 517 aa13.51□□□□□ -0.25
LAMA4-205ENST00000389463 CWC22Q9HCG8 908 aaKnown RBP13.51□□□□□ -0.25
LAMA4-205ENST00000389463 RRP1P56182 461 aaKnown RBP13.51□□□□□ -0.25
LAMA4-205ENST00000389463 TCEAL9Q9UHQ7 104 aa13.51□□□□□ -0.25
LAMA4-205ENST00000389463 CPLX2Q6PUV4 134 aaKnown RBP13.51□□□□□ -0.25
LAMA4-205ENST00000389463 SPG7Q9UQ90 795 aa13.5□□□□□ -0.25
LAMA4-205ENST00000389463 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
LAMA4-205ENST00000389463 ANKRD30BQ9BXX2 1392 aa13.5□□□□□ -0.25
LAMA4-205ENST00000389463 DDX54Q8TDD1 881 aaKnown RBP13.5□□□□□ -0.25
LAMA4-205ENST00000389463 CABP4P57796 275 aa13.49□□□□□ -0.25
LAMA4-205ENST00000389463 CCDC30Q5VVM6 783 aa13.49□□□□□ -0.25
LAMA4-205ENST00000389463 CRBNQ96SW2 442 aa13.49□□□□□ -0.25
LAMA4-205ENST00000389463 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
LAMA4-205ENST00000389463 NBPF1Q3BBV0 1214 aa13.49□□□□□ -0.25
LAMA4-205ENST00000389463 ADGRL1O94910 1474 aa13.49□□□□□ -0.25
LAMA4-205ENST00000389463 FAM177BA6PVY3 158 aa13.49□□□□□ -0.25
LAMA4-205ENST00000389463 DHX16O60231 1041 aaKnown RBP13.49□□□□□ -0.25
LAMA4-205ENST00000389463 TRDNQ13061 729 aa13.49□□□□□ -0.25
LAMA4-205ENST00000389463 NEUROD6Q96NK8 337 aa13.48□□□□□ -0.25
LAMA4-205ENST00000389463 CCDC141Q6ZP82 1450 aa13.48□□□□□ -0.25
LAMA4-205ENST00000389463 ZKSCAN1P17029 563 aaPredicted RBP13.48□□□□□ -0.25
LAMA4-205ENST00000389463 TIAM1Q13009 1591 aa13.48□□□□□ -0.25
LAMA4-205ENST00000389463 UBTFL1P0CB47 393 aaPredicted RBP13.48□□□□□ -0.25
LAMA4-205ENST00000389463 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
LAMA4-205ENST00000389463 PPP1R1BQ9UD71 204 aaPredicted RBP13.48□□□□□ -0.25
LAMA4-205ENST00000389463 CNTLNQ9NXG0 1405 aa13.48□□□□□ -0.25
LAMA4-205ENST00000389463 MSNP26038 577 aaKnown RBP13.47□□□□□ -0.25
LAMA4-205ENST00000389463 ERC2O15083 957 aa13.47□□□□□ -0.25
LAMA4-205ENST00000389463 KIF14Q15058 1648 aa13.47□□□□□ -0.25
LAMA4-205ENST00000389463 SLC12A5Q9H2X9 1139 aa13.47□□□□□ -0.25
LAMA4-205ENST00000389463 CREBRFQ8IUR6 639 aa13.47□□□□□ -0.25
LAMA4-205ENST00000389463 ERICH2A1L162 156 aa13.46□□□□□ -0.25
LAMA4-205ENST00000389463 TRIM29Q14134 588 aa13.46□□□□□ -0.26
LAMA4-205ENST00000389463 CCDC27Q2M243 656 aa13.46□□□□□ -0.26
LAMA4-205ENST00000389463 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.26
LAMA4-205ENST00000389463 REC8O95072 547 aa13.45□□□□□ -0.26
LAMA4-205ENST00000389463 PLB1Q6P1J6 1458 aa13.45□□□□□ -0.26
LAMA4-205ENST00000389463 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
LAMA4-205ENST00000389463 ZNF530Q6P9A1 599 aaPredicted RBP13.45□□□□□ -0.26
LAMA4-205ENST00000389463 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
LAMA4-205ENST00000389463 ANO2Q9NQ90 1003 aa13.45□□□□□ -0.26
LAMA4-205ENST00000389463 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
LAMA4-205ENST00000389463 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
LAMA4-205ENST00000389463 SULT6B1Q6IMI4 303 aa13.44□□□□□ -0.26
LAMA4-205ENST00000389463 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
LAMA4-205ENST00000389463 AKNAQ7Z591 1439 aa13.44□□□□□ -0.26
LAMA4-205ENST00000389463 CPLX1O14810 134 aa13.43□□□□□ -0.26
LAMA4-205ENST00000389463 NFXL1Q6ZNB6 911 aa13.43□□□□□ -0.26
LAMA4-205ENST00000389463 DMRT2Q9Y5R5 561 aa13.43□□□□□ -0.26
LAMA4-205ENST00000389463 TCP11L2Q8N4U5 519 aa13.43□□□□□ -0.26
LAMA4-205ENST00000389463 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
LAMA4-205ENST00000389463 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
LAMA4-205ENST00000389463 DEKP35659 375 aaKnown RBP13.43□□□□□ -0.26
LAMA4-205ENST00000389463 BRD4O60885 1362 aaPredicted RBP13.43□□□□□ -0.26
LAMA4-205ENST00000389463 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
LAMA4-205ENST00000389463 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
LAMA4-205ENST00000389463 WASHC4Q2M389 1173 aa13.42□□□□□ -0.26
LAMA4-205ENST00000389463 GZF1Q9H116 711 aaPredicted RBP13.42□□□□□ -0.26
LAMA4-205ENST00000389463 FYB1O15117 783 aa13.42□□□□□ -0.26
LAMA4-205ENST00000389463 DENND4BO75064 1496 aaPredicted RBP13.42□□□□□ -0.26
LAMA4-205ENST00000389463 WWC1Q8IX03 1113 aa13.42□□□□□ -0.26
LAMA4-205ENST00000389463 ADAMTS8Q9UP79 889 aa13.42□□□□□ -0.26
LAMA4-205ENST00000389463 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
LAMA4-205ENST00000389463 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
LAMA4-205ENST00000389463 NUDT16Q96DE0 195 aaKnown RBP13.42□□□□□ -0.26
LAMA4-205ENST00000389463 GNAI3P08754 354 aa13.41□□□□□ -0.26
LAMA4-205ENST00000389463 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
LAMA4-205ENST00000389463 KCNH5Q8NCM2 988 aa13.41□□□□□ -0.26
LAMA4-205ENST00000389463 TNNT3P45378 269 aaPredicted RBP13.41□□□□□ -0.26
LAMA4-205ENST00000389463 ATP6V1DQ9Y5K8 247 aa13.41□□□□□ -0.26
LAMA4-205ENST00000389463 ZC3H6P61129 1189 aaKnown RBP13.41□□□□□ -0.26
LAMA4-205ENST00000389463 FAM161AQ3B820 660 aa13.41□□□□□ -0.26
LAMA4-205ENST00000389463 TPD52L1Q16890 204 aaPredicted RBP13.4□□□□□ -0.26
LAMA4-205ENST00000389463 CAMSAP2Q08AD1 1489 aa13.4□□□□□ -0.26
LAMA4-205ENST00000389463 TBC1D2BQ9UPU7 963 aa13.4□□□□□ -0.26
LAMA4-205ENST00000389463 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
LAMA4-205ENST00000389463 PHF14O94880 888 aa13.4□□□□□ -0.26
LAMA4-205ENST00000389463 CEBPAP49715 358 aaPredicted RBP13.39□□□□□ -0.27
LAMA4-205ENST00000389463 HDGFL1Q5TGJ6 251 aa13.39□□□□□ -0.27
LAMA4-205ENST00000389463 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
LAMA4-205ENST00000389463 TWISTNBQ3B726 338 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms