RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 MARF1Q9Y4F3 1742 aaKnown RBP32.48■■■□□ 2.79
CNEP1R1-201ENST00000389134 HFM1A2PYH4 1435 aa32.48■■■□□ 2.79
CNEP1R1-201ENST00000389134 CCDC125Q86Z20 511 aa32.46■■■□□ 2.79
CNEP1R1-201ENST00000389134 RPGRIP1LQ68CZ1 1315 aa32.46■■■□□ 2.79
CNEP1R1-201ENST00000389134 NPHP3Q7Z494 1330 aa32.45■■■□□ 2.78
CNEP1R1-201ENST00000389134 MYOM2P54296 1465 aa32.43■■■□□ 2.78
CNEP1R1-201ENST00000389134 PPLO60437 1756 aa32.42■■■□□ 2.78
CNEP1R1-201ENST00000389134 ESCO1Q5FWF5 840 aa32.41■■■□□ 2.78
CNEP1R1-201ENST00000389134 BCL9LQ86UU0 1499 aa32.4■■■□□ 2.78
CNEP1R1-201ENST00000389134 CDC42BPGQ6DT37 1551 aa32.39■■■□□ 2.78
CNEP1R1-201ENST00000389134 PXDNQ92626 1479 aa32.36■■■□□ 2.77
CNEP1R1-201ENST00000389134 GJD4Q96KN9 370 aaPredicted RBP32.36■■■□□ 2.77
CNEP1R1-201ENST00000389134 NAIPQ13075 1403 aa32.34■■■□□ 2.77
CNEP1R1-201ENST00000389134 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.34■■■□□ 2.77
CNEP1R1-201ENST00000389134 LRPPRCP42704 1394 aaKnown RBP32.33■■■□□ 2.77
CNEP1R1-201ENST00000389134 FOXO3O43524 673 aa32.33■■■□□ 2.77
CNEP1R1-201ENST00000389134 PPARGC1BQ86YN6 1023 aaKnown RBP32.33■■■□□ 2.77
CNEP1R1-201ENST00000389134 XPCQ01831 940 aaPredicted RBP32.29■■■□□ 2.76
CNEP1R1-201ENST00000389134 UNC5CLQ8IV45 518 aa32.25■■■□□ 2.75
CNEP1R1-201ENST00000389134 SLC4A1APQ9BWU0 796 aaKnown RBP32.25■■■□□ 2.75
CNEP1R1-201ENST00000389134 RRBP1Q9P2E9 1410 aaKnown RBP32.23■■■□□ 2.75
CNEP1R1-201ENST00000389134 BRWD3Q6RI45 1802 aa32.23■■■□□ 2.75
CNEP1R1-201ENST00000389134 SLIT2O94813 1529 aa32.21■■■□□ 2.75
CNEP1R1-201ENST00000389134 TECPR2O15040 1411 aa32.21■■■□□ 2.75
CNEP1R1-201ENST00000389134 BLMP54132 1417 aaPredicted RBP32.21■■■□□ 2.75
CNEP1R1-201ENST00000389134 RALGAPBQ86X10 1494 aa32.21■■■□□ 2.75
CNEP1R1-201ENST00000389134 GLI3P10071 1580 aa32.2■■■□□ 2.75
CNEP1R1-201ENST00000389134 NUTM2FA1L443 756 aa32.2■■■□□ 2.75
CNEP1R1-201ENST00000389134 WAPLQ7Z5K2 1190 aa32.2■■■□□ 2.75
CNEP1R1-201ENST00000389134 KIF1AQ12756 1690 aa32.19■■■□□ 2.74
CNEP1R1-201ENST00000389134 STK26Q9P289 416 aa32.19■■■□□ 2.74
CNEP1R1-201ENST00000389134 SPATA31A3Q5VYP0 1347 aa32.19■■■□□ 2.74
CNEP1R1-201ENST00000389134 ADGRF5Q8IZF2 1346 aa32.18■■■□□ 2.74
CNEP1R1-201ENST00000389134 KNDC1Q76NI1 1749 aa32.17■■■□□ 2.74
CNEP1R1-201ENST00000389134 FMN2Q9NZ56 1722 aa32.17■■■□□ 2.74
CNEP1R1-201ENST00000389134 ABCC11Q96J66 1382 aa32.16■■■□□ 2.74
CNEP1R1-201ENST00000389134 USP32Q8NFA0 1604 aa32.15■■■□□ 2.74
CNEP1R1-201ENST00000389134 CCDC144AA2RUR9 1427 aa32.15■■■□□ 2.74
CNEP1R1-201ENST00000389134 IFT172Q9UG01 1749 aa32.12■■■□□ 2.73
CNEP1R1-201ENST00000389134 SF3B2Q13435 895 aaKnown RBP32.12■■■□□ 2.73
CNEP1R1-201ENST00000389134 KRT28Q7Z3Y7 464 aa32.12■■■□□ 2.73
CNEP1R1-201ENST00000389134 RGPD8O14715 1765 aaPredicted RBP32.12■■■□□ 2.73
CNEP1R1-201ENST00000389134 ANKRD30BQ9BXX2 1392 aa32.11■■■□□ 2.73
CNEP1R1-201ENST00000389134 PLEKHH1Q9ULM0 1364 aa32.09■■■□□ 2.73
CNEP1R1-201ENST00000389134 RGL3Q3MIN7 710 aa32.09■■■□□ 2.73
CNEP1R1-201ENST00000389134 DEFB132Q7Z7B7 95 aa32.09■■■□□ 2.73
CNEP1R1-201ENST00000389134 NWD2Q9ULI1 1742 aa32.09■■■□□ 2.73
CNEP1R1-201ENST00000389134 HAP1P54257 671 aaPredicted RBP32.08■■■□□ 2.73
CNEP1R1-201ENST00000389134 TMEM132EQ6IEE7 984 aa32.08■■■□□ 2.73
CNEP1R1-201ENST00000389134 SEPT12Q8IYM1 358 aa32.08■■■□□ 2.73
CNEP1R1-201ENST00000389134 VPS72Q15906 364 aa32.07■■■□□ 2.72
CNEP1R1-201ENST00000389134 PSME1Q06323 249 aa32.06■■■□□ 2.72
CNEP1R1-201ENST00000389134 SPATA31E1Q6ZUB1 1445 aa32.05■■■□□ 2.72
CNEP1R1-201ENST00000389134 PLCH1Q4KWH8 1693 aa32.05■■■□□ 2.72
CNEP1R1-201ENST00000389134 TNS3Q68CZ2 1445 aa32.04■■■□□ 2.72
CNEP1R1-201ENST00000389134 ONECUT3O60422 494 aaPredicted RBP32.04■■■□□ 2.72
CNEP1R1-201ENST00000389134 SIRT1Q96EB6 747 aa32.04■■■□□ 2.72
CNEP1R1-201ENST00000389134 YTHDC2Q9H6S0 1430 aaKnown RBP32.03■■■□□ 2.72
CNEP1R1-201ENST00000389134 PIK3C2GO75747 1445 aa32.02■■■□□ 2.72
CNEP1R1-201ENST00000389134 PHF8Q9UPP1 1060 aa32.02■■■□□ 2.72
CNEP1R1-201ENST00000389134 LRP5O75197 1615 aa32■■■□□ 2.71
CNEP1R1-201ENST00000389134 CCDC9Q9Y3X0 531 aaKnown RBP32■■■□□ 2.71
CNEP1R1-201ENST00000389134 KRT27Q7Z3Y8 459 aa31.99■■■□□ 2.71
CNEP1R1-201ENST00000389134 CABLES1Q8TDN4 633 aa31.99■■■□□ 2.71
CNEP1R1-201ENST00000389134 ABCA3Q99758 1704 aa31.98■■■□□ 2.71
CNEP1R1-201ENST00000389134 SBNO1A3KN83 1393 aa31.98■■■□□ 2.71
CNEP1R1-201ENST00000389134 ARHGEF10O15013 1369 aa31.95■■■□□ 2.71
CNEP1R1-201ENST00000389134 NRXN1Q9ULB1 1477 aa31.95■■■□□ 2.7
CNEP1R1-201ENST00000389134 LMOD2Q6P5Q4 547 aa31.93■■■□□ 2.7
CNEP1R1-201ENST00000389134 PLEKHG5O94827 1062 aa31.92■■■□□ 2.7
CNEP1R1-201ENST00000389134 C14orf93Q9H972 538 aaKnown RBP31.92■■■□□ 2.7
CNEP1R1-201ENST00000389134 BAG6P46379 1132 aa31.91■■■□□ 2.7
CNEP1R1-201ENST00000389134 FAM83GA6ND36 823 aa31.9■■■□□ 2.7
CNEP1R1-201ENST00000389134 MPHOSPH9Q99550 1183 aa31.9■■■□□ 2.7
CNEP1R1-201ENST00000389134 DHX57Q6P158 1386 aaKnown RBP31.9■■■□□ 2.7
CNEP1R1-201ENST00000389134 A0A0G2JS52 829 aa31.87■■■□□ 2.69
CNEP1R1-201ENST00000389134 MYT1Q01538 1121 aa31.87■■■□□ 2.69
CNEP1R1-201ENST00000389134 NRAPQ86VF7 1730 aa31.86■■■□□ 2.69
CNEP1R1-201ENST00000389134 PSDA5PKW4 1024 aaPredicted RBP31.83■■■□□ 2.69
CNEP1R1-201ENST00000389134 HRCP23327 699 aa31.83■■■□□ 2.69
CNEP1R1-201ENST00000389134 PRAM1Q96QH2 718 aa31.83■■■□□ 2.69
CNEP1R1-201ENST00000389134 ANKARQ7Z5J8 1434 aa31.83■■■□□ 2.69
CNEP1R1-201ENST00000389134 SAFB2Q14151 953 aaKnown RBP eCLIP31.82■■■□□ 2.68
CNEP1R1-201ENST00000389134 FAM98CQ17RN3 349 aaKnown RBP31.82■■■□□ 2.68
CNEP1R1-201ENST00000389134 CFAP70Q5T0N1 1121 aa31.82■■■□□ 2.68
CNEP1R1-201ENST00000389134 RGPD1P0DJD0 1748 aa31.82■■■□□ 2.68
CNEP1R1-201ENST00000389134 PMFBP1Q8TBY8 1022 aa31.81■■■□□ 2.68
CNEP1R1-201ENST00000389134 COL14A1Q05707 1796 aaKnown RBP31.81■■■□□ 2.68
CNEP1R1-201ENST00000389134 BTG4Q9NY30 223 aa31.8■■■□□ 2.68
CNEP1R1-201ENST00000389134 TRPM3Q9HCF6 1732 aaPredicted RBP31.8■■■□□ 2.68
CNEP1R1-201ENST00000389134 POGKQ9P215 609 aa31.78■■■□□ 2.68
CNEP1R1-201ENST00000389134 DLC1Q96QB1 1528 aa31.77■■■□□ 2.68
CNEP1R1-201ENST00000389134 ALS2Q96Q42 1657 aa31.76■■■□□ 2.68
CNEP1R1-201ENST00000389134 ADGRB2O60241 1585 aa31.75■■■□□ 2.67
CNEP1R1-201ENST00000389134 GPRASP1Q5JY77 1395 aa31.74■■■□□ 2.67
CNEP1R1-201ENST00000389134 EN1Q05925 392 aaPredicted RBP31.74■■■□□ 2.67
CNEP1R1-201ENST00000389134 SPATA31A5Q5VU36 1347 aa31.72■■■□□ 2.67
CNEP1R1-201ENST00000389134 SPATA31A7Q8IWB4 1347 aa31.72■■■□□ 2.67
CNEP1R1-201ENST00000389134 ACIN1Q9UKV3 1341 aaKnown RBP31.71■■■□□ 2.67
CNEP1R1-201ENST00000389134 EIF3AQ14152 1382 aaKnown RBP31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms