RNA–Protein interactions for RNA: ENST00000384018.1

RNU6-643P-201, Transcript of RNA, U6 small nuclear 643, pseudogene, humanhuman

BASIC

Gene RNU6-643P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-643P-201ENST00000384018 BRICD5Q6PL45 260 aa5.04□□□□□ -1.6
RNU6-643P-201ENST00000384018 STK17AQ9UEE5 414 aa5.04□□□□□ -1.6
RNU6-643P-201ENST00000384018 WNT7AO00755 349 aa5.03□□□□□ -1.6
RNU6-643P-201ENST00000384018 ZBTB24O43167 697 aaPredicted RBP5.03□□□□□ -1.6
RNU6-643P-201ENST00000384018 TRIM32Q13049 653 aa5.03□□□□□ -1.6
RNU6-643P-201ENST00000384018 SULF1Q8IWU6 871 aa5.03□□□□□ -1.6
RNU6-643P-201ENST00000384018 PHOX2BQ99453 314 aa5.03□□□□□ -1.6
RNU6-643P-201ENST00000384018 ATP13A2Q9NQ11 1180 aa5.03□□□□□ -1.6
RNU6-643P-201ENST00000384018 TESPA1A2RU30 521 aaPredicted RBP5.02□□□□□ -1.61
RNU6-643P-201ENST00000384018 SNRPBP14678 240 aaKnown RBP5.02□□□□□ -1.61
RNU6-643P-201ENST00000384018 INSM1Q01101 510 aaPredicted RBP5.02□□□□□ -1.61
RNU6-643P-201ENST00000384018 SNIP1Q8TAD8 396 aaKnown RBP5.02□□□□□ -1.61
RNU6-643P-201ENST00000384018 J3QL48 77 aa5.01□□□□□ -1.61
RNU6-643P-201ENST00000384018 MRGPRX2Q96LB1 330 aa5.01□□□□□ -1.61
RNU6-643P-201ENST00000384018 TRIM47Q96LD4 638 aa5.01□□□□□ -1.61
RNU6-643P-201ENST00000384018 TERTO14746 1132 aaKnown RBP5□□□□□ -1.61
RNU6-643P-201ENST00000384018 MMP16P51512 607 aa5□□□□□ -1.61
RNU6-643P-201ENST00000384018 DXOO77932 396 aaKnown RBP4.99□□□□□ -1.61
RNU6-643P-201ENST00000384018 GRIPAP1Q4V328 841 aa4.99□□□□□ -1.61
RNU6-643P-201ENST00000384018 HPS1Q92902 700 aa4.99□□□□□ -1.61
RNU6-643P-201ENST00000384018 REPIN1Q9BWE0 567 aaKnown RBP4.99□□□□□ -1.61
RNU6-643P-201ENST00000384018 SENP2Q9HC62 589 aa4.99□□□□□ -1.61
RNU6-643P-201ENST00000384018 Q3C1V9 767 aa4.98□□□□□ -1.61
RNU6-643P-201ENST00000384018 SKOR1P84550 965 aa4.97□□□□□ -1.61
RNU6-643P-201ENST00000384018 SMYD5Q6GMV2 418 aa4.97□□□□□ -1.61
RNU6-643P-201ENST00000384018 KIFC2Q96AC6 838 aa4.97□□□□□ -1.61
RNU6-643P-201ENST00000384018 USB1Q9BQ65 265 aaKnown RBP4.97□□□□□ -1.61
RNU6-643P-201ENST00000384018 CD46P15529 392 aa4.96□□□□□ -1.62
RNU6-643P-201ENST00000384018 HLA-CQ95604 372 aa4.96□□□□□ -1.62
RNU6-643P-201ENST00000384018 WNT7BP56706 349 aa4.95□□□□□ -1.62
RNU6-643P-201ENST00000384018 RC3H1Q5TC82 1133 aaKnown RBP4.95□□□□□ -1.62
RNU6-643P-201ENST00000384018 GPIHBP1Q8IV16 184 aa4.95□□□□□ -1.62
RNU6-643P-201ENST00000384018 CCDC24Q8N4L8 307 aa4.95□□□□□ -1.62
RNU6-643P-201ENST00000384018 KDM4AO75164 1064 aa4.94□□□□□ -1.62
RNU6-643P-201ENST00000384018 ALDH1A1P00352 501 aa4.93□□□□□ -1.62
RNU6-643P-201ENST00000384018 BMP1P13497 986 aa4.93□□□□□ -1.62
RNU6-643P-201ENST00000384018 HOXA2O43364 376 aa4.92□□□□□ -1.62
RNU6-643P-201ENST00000384018 JUNDP17535 347 aa4.92□□□□□ -1.62
RNU6-643P-201ENST00000384018 GMPRP36959 345 aa4.92□□□□□ -1.62
RNU6-643P-201ENST00000384018 GUCA2AQ02747 115 aa4.92□□□□□ -1.62
RNU6-643P-201ENST00000384018 TRIM46Q7Z4K8 759 aa4.92□□□□□ -1.62
RNU6-643P-201ENST00000384018 SLC16A10Q8TF71 515 aa4.92□□□□□ -1.62
RNU6-643P-201ENST00000384018 NXF1Q9UBU9 619 aaKnown RBP4.92□□□□□ -1.62
RNU6-643P-201ENST00000384018 SIAH2O43255 324 aa4.91□□□□□ -1.62
RNU6-643P-201ENST00000384018 LORP23490 312 aaPredicted RBP4.91□□□□□ -1.62
RNU6-643P-201ENST00000384018 USP46P62068 366 aa4.91□□□□□ -1.62
RNU6-643P-201ENST00000384018 MAP2K5Q13163 448 aa4.91□□□□□ -1.62
RNU6-643P-201ENST00000384018 FAM181BA6NEQ2 426 aa4.9□□□□□ -1.63
RNU6-643P-201ENST00000384018 VEGFBP49765 207 aa4.9□□□□□ -1.63
RNU6-643P-201ENST00000384018 MDM2Q00987 491 aaPredicted RBP4.9□□□□□ -1.63
RNU6-643P-201ENST00000384018 EHBP1Q8NDI1 1231 aa4.9□□□□□ -1.63
RNU6-643P-201ENST00000384018 SYMPKQ92797 1274 aaKnown RBP4.9□□□□□ -1.63
RNU6-643P-201ENST00000384018 CAPN5O15484 640 aaPredicted RBP4.89□□□□□ -1.63
RNU6-643P-201ENST00000384018 PTCRAQ6ISU1 281 aaPredicted RBP4.89□□□□□ -1.63
RNU6-643P-201ENST00000384018 NPAS3Q8IXF0 933 aa4.89□□□□□ -1.63
RNU6-643P-201ENST00000384018 ZSCAN1Q8NBB4 408 aa4.89□□□□□ -1.63
RNU6-643P-201ENST00000384018 IRF7Q92985 503 aa4.89□□□□□ -1.63
RNU6-643P-201ENST00000384018 NUDT12Q9BQG2 462 aa4.89□□□□□ -1.63
RNU6-643P-201ENST00000384018 H3BM21 787 aa4.88□□□□□ -1.63
RNU6-643P-201ENST00000384018 RETREG3Q86VR2 466 aa4.88□□□□□ -1.63
RNU6-643P-201ENST00000384018 WASF2Q9Y6W5 498 aa4.88□□□□□ -1.63
RNU6-643P-201ENST00000384018 ERBB4Q15303 1308 aa4.88□□□□□ -1.63
RNU6-643P-201ENST00000384018 IRF6O14896 467 aa4.87□□□□□ -1.63
RNU6-643P-201ENST00000384018 TLL2Q9Y6L7 1015 aa4.87□□□□□ -1.63
RNU6-643P-201ENST00000384018 CCNYL3P0C7X3 344 aa4.86□□□□□ -1.63
RNU6-643P-201ENST00000384018 SH3BP2P78314 561 aa4.86□□□□□ -1.63
RNU6-643P-201ENST00000384018 CCDC102AQ96A19 550 aa4.86□□□□□ -1.63
RNU6-643P-201ENST00000384018 ZFP42Q96MM3 310 aa4.86□□□□□ -1.63
RNU6-643P-201ENST00000384018 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
RNU6-643P-201ENST00000384018 MS4A1P11836 297 aa4.85□□□□□ -1.63
RNU6-643P-201ENST00000384018 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
RNU6-643P-201ENST00000384018 GPCPD1Q9NPB8 672 aa4.85□□□□□ -1.63
RNU6-643P-201ENST00000384018 FAM217BQ9NTX9 383 aaPredicted RBP4.85□□□□□ -1.63
RNU6-643P-201ENST00000384018 PCDHGC3Q9UN70 934 aa4.85□□□□□ -1.63
RNU6-643P-201ENST00000384018 MINK1Q8N4C8 1332 aaPredicted RBP4.84□□□□□ -1.63
RNU6-643P-201ENST00000384018 LINC01559Q495D7 138 aa4.84□□□□□ -1.63
RNU6-643P-201ENST00000384018 UNC93B1Q9H1C4 597 aa4.84□□□□□ -1.63
RNU6-643P-201ENST00000384018 C6orf229H3BNL8 230 aa4.83□□□□□ -1.64
RNU6-643P-201ENST00000384018 FDX1P10109 184 aa4.83□□□□□ -1.64
RNU6-643P-201ENST00000384018 CLCN1P35523 988 aa4.83□□□□□ -1.64
RNU6-643P-201ENST00000384018 NNTQ13423 1086 aa4.83□□□□□ -1.64
RNU6-643P-201ENST00000384018 PTPRNQ16849 979 aa4.83□□□□□ -1.64
RNU6-643P-201ENST00000384018 MRPL14Q6P1L8 145 aaKnown RBP4.83□□□□□ -1.64
RNU6-643P-201ENST00000384018 NUTM1Q86Y26 1132 aa4.83□□□□□ -1.64
RNU6-643P-201ENST00000384018 VSIG8P0DPA2 414 aa4.82□□□□□ -1.64
RNU6-643P-201ENST00000384018 TIMP2P16035 220 aa4.82□□□□□ -1.64
RNU6-643P-201ENST00000384018 PLCB2Q00722 1185 aa4.82□□□□□ -1.64
RNU6-643P-201ENST00000384018 ZNF511Q8NB15 262 aa4.82□□□□□ -1.64
RNU6-643P-201ENST00000384018 BAP1Q92560 729 aa4.82□□□□□ -1.64
RNU6-643P-201ENST00000384018 PURBQ96QR8 312 aaKnown RBP4.82□□□□□ -1.64
RNU6-643P-201ENST00000384018 SOBPA7XYQ1 873 aa4.81□□□□□ -1.64
RNU6-643P-201ENST00000384018 ADH1CP00326 375 aa4.81□□□□□ -1.64
RNU6-643P-201ENST00000384018 EVA1BQ9NVM1 165 aa4.81□□□□□ -1.64
RNU6-643P-201ENST00000384018 PLEKHG3A1L390 1219 aa4.8□□□□□ -1.64
RNU6-643P-201ENST00000384018 VARSP26640 1264 aaKnown RBP4.8□□□□□ -1.64
RNU6-643P-201ENST00000384018 WDR4P57081 412 aaKnown RBP4.8□□□□□ -1.64
RNU6-643P-201ENST00000384018 KCNH2Q12809 1159 aa4.8□□□□□ -1.64
RNU6-643P-201ENST00000384018 SCARF1Q14162 830 aa4.8□□□□□ -1.64
RNU6-643P-201ENST00000384018 MPNDQ8N594 471 aa4.8□□□□□ -1.64
RNU6-643P-201ENST00000384018 NDUFV2P19404 249 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms