RNA–Protein interactions for RNA: ENST00000382671.8

PSMD13-202, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,489 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-202ENST00000382671 AHDC1Q5TGY3 1603 aaPredicted RBP22.8■■□□□ 1.24
PSMD13-202ENST00000382671 ARHGEF28Q8N1W1 1705 aaKnown RBP22.79■■□□□ 1.24
PSMD13-202ENST00000382671 C1orf167Q5SNV9 1468 aa22.78■■□□□ 1.24
PSMD13-202ENST00000382671 BRINP3Q76B58 766 aa22.78■■□□□ 1.24
PSMD13-202ENST00000382671 FMN2Q9NZ56 1722 aa22.77■■□□□ 1.24
PSMD13-202ENST00000382671 NHSL1Q5SYE7 1610 aa22.77■■□□□ 1.24
PSMD13-202ENST00000382671 COL16A1Q07092 1604 aaPredicted RBP22.76■■□□□ 1.23
PSMD13-202ENST00000382671 PRAM1Q96QH2 718 aa22.76■■□□□ 1.23
PSMD13-202ENST00000382671 TRAK1Q9UPV9 953 aa22.76■■□□□ 1.23
PSMD13-202ENST00000382671 TRPM1Q7Z4N2 1603 aa22.75■■□□□ 1.23
PSMD13-202ENST00000382671 POGKQ9P215 609 aa22.73■■□□□ 1.23
PSMD13-202ENST00000382671 ADGRB2O60241 1585 aa22.73■■□□□ 1.23
PSMD13-202ENST00000382671 NBPF1Q3BBV0 1214 aa22.72■■□□□ 1.23
PSMD13-202ENST00000382671 RGPD8O14715 1765 aaPredicted RBP22.71■■□□□ 1.23
PSMD13-202ENST00000382671 SAFB2Q14151 953 aaKnown RBP eCLIP22.71■■□□□ 1.23
PSMD13-202ENST00000382671 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
PSMD13-202ENST00000382671 MED1Q15648 1581 aaPredicted RBP22.69■■□□□ 1.22
PSMD13-202ENST00000382671 ORAI2Q96SN7 254 aa22.68■■□□□ 1.22
PSMD13-202ENST00000382671 SHPRHQ149N8 1683 aa22.67■■□□□ 1.22
PSMD13-202ENST00000382671 JCADQ9P266 1359 aa22.65■■□□□ 1.22
PSMD13-202ENST00000382671 CLSPNQ9HAW4 1339 aa22.64■■□□□ 1.22
PSMD13-202ENST00000382671 KIF1AQ12756 1690 aa22.64■■□□□ 1.22
PSMD13-202ENST00000382671 MINK1Q8N4C8 1332 aaPredicted RBP22.63■■□□□ 1.21
PSMD13-202ENST00000382671 USP32Q8NFA0 1604 aa22.63■■□□□ 1.21
PSMD13-202ENST00000382671 NUTM2FA1L443 756 aa22.63■■□□□ 1.21
PSMD13-202ENST00000382671 NBPF8Q3BBV2 869 aa22.63■■□□□ 1.21
PSMD13-202ENST00000382671 ESCO1Q5FWF5 840 aa22.63■■□□□ 1.21
PSMD13-202ENST00000382671 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
PSMD13-202ENST00000382671 DDX17Q92841 729 aaKnown RBP22.62■■□□□ 1.21
PSMD13-202ENST00000382671 HIRIP3Q9BW71 556 aaPredicted RBP22.61■■□□□ 1.21
PSMD13-202ENST00000382671 ANKARQ7Z5J8 1434 aa22.61■■□□□ 1.21
PSMD13-202ENST00000382671 ROCK2O75116 1388 aaKnown RBP22.6■■□□□ 1.21
PSMD13-202ENST00000382671 QRICH2Q9H0J4 1663 aa22.6■■□□□ 1.21
PSMD13-202ENST00000382671 EIF3AQ14152 1382 aaKnown RBP22.59■■□□□ 1.21
PSMD13-202ENST00000382671 GPRASP1Q5JY77 1395 aa22.59■■□□□ 1.21
PSMD13-202ENST00000382671 WASLO00401 505 aaPredicted RBP22.59■■□□□ 1.21
PSMD13-202ENST00000382671 LRRC59Q96AG4 307 aaKnown RBP22.59■■□□□ 1.21
PSMD13-202ENST00000382671 TULP4Q9NRJ4 1543 aa22.58■■□□□ 1.21
PSMD13-202ENST00000382671 SOS2Q07890 1332 aaPredicted RBP22.58■■□□□ 1.21
PSMD13-202ENST00000382671 NPHP3Q7Z494 1330 aa22.57■■□□□ 1.2
PSMD13-202ENST00000382671 ITSN1Q15811 1721 aa22.57■■□□□ 1.2
PSMD13-202ENST00000382671 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
PSMD13-202ENST00000382671 RALGAPBQ86X10 1494 aa22.57■■□□□ 1.2
PSMD13-202ENST00000382671 PXDNQ92626 1479 aa22.56■■□□□ 1.2
PSMD13-202ENST00000382671 SPATA31A6Q5VVP1 1343 aa22.55■■□□□ 1.2
PSMD13-202ENST00000382671 FOXO3O43524 673 aa22.54■■□□□ 1.2
PSMD13-202ENST00000382671 PHF8Q9UPP1 1060 aa22.54■■□□□ 1.2
PSMD13-202ENST00000382671 PRR36Q9H6K5 1346 aa22.52■■□□□ 1.2
PSMD13-202ENST00000382671 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
PSMD13-202ENST00000382671 TIMELESSQ9UNS1 1208 aa22.52■■□□□ 1.2
PSMD13-202ENST00000382671 ATP7BP35670 1465 aa22.51■■□□□ 1.19
PSMD13-202ENST00000382671 TOPAZ1Q8N9V7 1692 aa22.5■■□□□ 1.19
PSMD13-202ENST00000382671 CDK19Q9BWU1 502 aa22.5■■□□□ 1.19
PSMD13-202ENST00000382671 LRP6O75581 1613 aa22.5■■□□□ 1.19
PSMD13-202ENST00000382671 COL22A1Q8NFW1 1626 aaPredicted RBP22.5■■□□□ 1.19
PSMD13-202ENST00000382671 CCER1Q8TC90 406 aaPredicted RBP22.49■■□□□ 1.19
PSMD13-202ENST00000382671 CARD11Q9BXL7 1154 aa22.49■■□□□ 1.19
PSMD13-202ENST00000382671 XPCQ01831 940 aaPredicted RBP22.47■■□□□ 1.19
PSMD13-202ENST00000382671 NUDT16Q96DE0 195 aaKnown RBP22.47■■□□□ 1.19
PSMD13-202ENST00000382671 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
PSMD13-202ENST00000382671 PMFBP1Q8TBY8 1022 aa22.47■■□□□ 1.19
PSMD13-202ENST00000382671 KRT28Q7Z3Y7 464 aa22.46■■□□□ 1.19
PSMD13-202ENST00000382671 TRPM3Q9HCF6 1732 aaPredicted RBP22.44■■□□□ 1.18
PSMD13-202ENST00000382671 PSME1Q06323 249 aa22.44■■□□□ 1.18
PSMD13-202ENST00000382671 SPATA31A3Q5VYP0 1347 aa22.43■■□□□ 1.18
PSMD13-202ENST00000382671 NUTM2BA6NNL0 878 aaPredicted RBP22.42■■□□□ 1.18
PSMD13-202ENST00000382671 NUTM2EB1AL46 878 aaPredicted RBP22.42■■□□□ 1.18
PSMD13-202ENST00000382671 NUTM2AQ8IVF1 878 aaPredicted RBP22.42■■□□□ 1.18
PSMD13-202ENST00000382671 SBNO1A3KN83 1393 aa22.42■■□□□ 1.18
PSMD13-202ENST00000382671 SBNO2Q9Y2G9 1366 aa22.42■■□□□ 1.18
PSMD13-202ENST00000382671 SRPK2P78362 688 aaKnown RBP22.41■■□□□ 1.18
PSMD13-202ENST00000382671 CCDC61Q9Y6R9 512 aa22.41■■□□□ 1.18
PSMD13-202ENST00000382671 EVC2Q86UK5 1308 aa22.41■■□□□ 1.18
PSMD13-202ENST00000382671 MARF1Q9Y4F3 1742 aaKnown RBP22.41■■□□□ 1.18
PSMD13-202ENST00000382671 TNS3Q68CZ2 1445 aa22.41■■□□□ 1.18
PSMD13-202ENST00000382671 ALS2Q96Q42 1657 aa22.4■■□□□ 1.18
PSMD13-202ENST00000382671 MEX3CQ5U5Q3 659 aaKnown RBP22.4■■□□□ 1.18
PSMD13-202ENST00000382671 RGS17Q9UGC6 210 aaPredicted RBP22.4■■□□□ 1.18
PSMD13-202ENST00000382671 NGDNQ8NEJ9 315 aaKnown RBP22.39■■□□□ 1.17
PSMD13-202ENST00000382671 CABP2Q9NPB3 220 aa22.39■■□□□ 1.17
PSMD13-202ENST00000382671 PLEKHG3A1L390 1219 aa22.38■■□□□ 1.17
PSMD13-202ENST00000382671 ILDR2Q71H61 639 aa22.38■■□□□ 1.17
PSMD13-202ENST00000382671 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
PSMD13-202ENST00000382671 PPIP5K1Q6PFW1 1433 aa22.36■■□□□ 1.17
PSMD13-202ENST00000382671 ARHGEF10O15013 1369 aa22.36■■□□□ 1.17
PSMD13-202ENST00000382671 ABCA3Q99758 1704 aa22.35■■□□□ 1.17
PSMD13-202ENST00000382671 ACEP12821 1306 aa22.34■■□□□ 1.17
PSMD13-202ENST00000382671 ADAMTS2O95450 1211 aa22.31■■□□□ 1.16
PSMD13-202ENST00000382671 AKAP12Q02952 1782 aa22.3■■□□□ 1.16
PSMD13-202ENST00000382671 ST20-MTHFSA0A0A6YYL1 179 aa22.3■■□□□ 1.16
PSMD13-202ENST00000382671 LMOD2Q6P5Q4 547 aa22.3■■□□□ 1.16
PSMD13-202ENST00000382671 C8orf37Q96NL8 207 aa22.3■■□□□ 1.16
PSMD13-202ENST00000382671 ATAD2Q6PL18 1390 aa22.3■■□□□ 1.16
PSMD13-202ENST00000382671 USP47Q96K76 1375 aa22.3■■□□□ 1.16
PSMD13-202ENST00000382671 CRYBG1Q9Y4K1 1723 aa22.3■■□□□ 1.16
PSMD13-202ENST00000382671 POTEAQ6S8J7 498 aa22.29■■□□□ 1.16
PSMD13-202ENST00000382671 CABP1Q9NZU7 370 aa22.29■■□□□ 1.16
PSMD13-202ENST00000382671 ZNF772Q68DY9 489 aaPredicted RBP22.28■■□□□ 1.16
PSMD13-202ENST00000382671 TESK2Q96S53 571 aa22.28■■□□□ 1.16
PSMD13-202ENST00000382671 AFF2P51816 1311 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms