RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 RALGAPBQ86X10 1494 aa25.02■■□□□ 1.6
CD9-202ENST00000382515 SLAIN2Q9P270 581 aa25.01■■□□□ 1.59
CD9-202ENST00000382515 EIF3AQ14152 1382 aaKnown RBP25.01■■□□□ 1.59
CD9-202ENST00000382515 CENPJQ9HC77 1338 aaPredicted RBP24.99■■□□□ 1.59
CD9-202ENST00000382515 PLEKHH1Q9ULM0 1364 aa24.98■■□□□ 1.59
CD9-202ENST00000382515 KNDC1Q76NI1 1749 aa24.97■■□□□ 1.59
CD9-202ENST00000382515 TRPM1Q7Z4N2 1603 aa24.97■■□□□ 1.59
CD9-202ENST00000382515 SAFB2Q14151 953 aaKnown RBP eCLIP24.95■■□□□ 1.58
CD9-202ENST00000382515 WASLO00401 505 aaPredicted RBP24.92■■□□□ 1.58
CD9-202ENST00000382515 ZEB1P37275 1124 aaPredicted RBP24.9■■□□□ 1.58
CD9-202ENST00000382515 MINK1Q8N4C8 1332 aaPredicted RBP24.89■■□□□ 1.58
CD9-202ENST00000382515 PIP4K2BP78356 416 aa24.89■■□□□ 1.58
CD9-202ENST00000382515 SBNO2Q9Y2G9 1366 aa24.88■■□□□ 1.57
CD9-202ENST00000382515 XIRP1Q702N8 1843 aaKnown RBP24.87■■□□□ 1.57
CD9-202ENST00000382515 HIRIP3Q9BW71 556 aaPredicted RBP24.86■■□□□ 1.57
CD9-202ENST00000382515 EVC2Q86UK5 1308 aa24.86■■□□□ 1.57
CD9-202ENST00000382515 ST20-MTHFSA0A0A6YYL1 179 aa24.85■■□□□ 1.57
CD9-202ENST00000382515 PUS7Q96PZ0 661 aaKnown RBP24.85■■□□□ 1.57
CD9-202ENST00000382515 CDK19Q9BWU1 502 aa24.85■■□□□ 1.57
CD9-202ENST00000382515 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.85■■□□□ 1.57
CD9-202ENST00000382515 MST1RQ04912 1400 aa24.85■■□□□ 1.57
CD9-202ENST00000382515 SCAF1Q9H7N4 1312 aaKnown RBP24.85■■□□□ 1.57
CD9-202ENST00000382515 EIF4G2P78344 907 aaKnown RBP eCLIP24.84■■□□□ 1.57
CD9-202ENST00000382515 CDC42BPGQ6DT37 1551 aa24.84■■□□□ 1.57
CD9-202ENST00000382515 USP47Q96K76 1375 aa24.83■■□□□ 1.57
CD9-202ENST00000382515 C1orf167Q5SNV9 1468 aa24.83■■□□□ 1.56
CD9-202ENST00000382515 ANKARQ7Z5J8 1434 aa24.81■■□□□ 1.56
CD9-202ENST00000382515 BRINP3Q76B58 766 aa24.81■■□□□ 1.56
CD9-202ENST00000382515 ESCO1Q5FWF5 840 aa24.8■■□□□ 1.56
CD9-202ENST00000382515 CCDC61Q9Y6R9 512 aa24.8■■□□□ 1.56
CD9-202ENST00000382515 ARHGEF28Q8N1W1 1705 aaKnown RBP24.8■■□□□ 1.56
CD9-202ENST00000382515 TESK2Q96S53 571 aa24.79■■□□□ 1.56
CD9-202ENST00000382515 ADGRB2O60241 1585 aa24.79■■□□□ 1.56
CD9-202ENST00000382515 SRPK2P78362 688 aaKnown RBP24.78■■□□□ 1.56
CD9-202ENST00000382515 CDCA8Q53HL2 280 aa24.78■■□□□ 1.56
CD9-202ENST00000382515 NUDT16Q96DE0 195 aaKnown RBP24.78■■□□□ 1.56
CD9-202ENST00000382515 NALCNQ8IZF0 1738 aa24.78■■□□□ 1.56
CD9-202ENST00000382515 ORAI2Q96SN7 254 aa24.77■■□□□ 1.56
CD9-202ENST00000382515 NUTM2FA1L443 756 aa24.76■■□□□ 1.55
CD9-202ENST00000382515 TMF1P82094 1093 aa24.76■■□□□ 1.55
CD9-202ENST00000382515 PHF8Q9UPP1 1060 aa24.75■■□□□ 1.55
CD9-202ENST00000382515 NPHP3Q7Z494 1330 aa24.73■■□□□ 1.55
CD9-202ENST00000382515 PLEKHG3A1L390 1219 aa24.72■■□□□ 1.55
CD9-202ENST00000382515 CABP2Q9NPB3 220 aa24.72■■□□□ 1.55
CD9-202ENST00000382515 TULP4Q9NRJ4 1543 aa24.71■■□□□ 1.55
CD9-202ENST00000382515 HSPA5P11021 654 aaKnown RBP24.71■■□□□ 1.55
CD9-202ENST00000382515 ATAD2Q6PL18 1390 aa24.7■■□□□ 1.55
CD9-202ENST00000382515 PRR36Q9H6K5 1346 aa24.7■■□□□ 1.54
CD9-202ENST00000382515 HSPA1LP34931 641 aa24.69■■□□□ 1.54
CD9-202ENST00000382515 PSME1Q06323 249 aa24.69■■□□□ 1.54
CD9-202ENST00000382515 FOXO3O43524 673 aa24.68■■□□□ 1.54
CD9-202ENST00000382515 LRRC59Q96AG4 307 aaKnown RBP24.68■■□□□ 1.54
CD9-202ENST00000382515 NGDNQ8NEJ9 315 aaKnown RBP24.67■■□□□ 1.54
CD9-202ENST00000382515 SOS2Q07890 1332 aaPredicted RBP24.66■■□□□ 1.54
CD9-202ENST00000382515 ZNF692Q9BU19 519 aaPredicted RBP24.66■■□□□ 1.54
CD9-202ENST00000382515 FMN2Q9NZ56 1722 aa24.66■■□□□ 1.54
CD9-202ENST00000382515 PMFBP1Q8TBY8 1022 aa24.64■■□□□ 1.54
CD9-202ENST00000382515 CABP1Q9NZU7 370 aa24.64■■□□□ 1.54
CD9-202ENST00000382515 QRICH2Q9H0J4 1663 aa24.64■■□□□ 1.53
CD9-202ENST00000382515 ATP7BP35670 1465 aa24.64■■□□□ 1.53
CD9-202ENST00000382515 KRT28Q7Z3Y7 464 aa24.63■■□□□ 1.53
CD9-202ENST00000382515 ROBO1Q9Y6N7 1651 aa24.62■■□□□ 1.53
CD9-202ENST00000382515 NINLQ9Y2I6 1382 aa24.62■■□□□ 1.53
CD9-202ENST00000382515 POLR3AO14802 1390 aaPredicted RBP24.6■■□□□ 1.53
CD9-202ENST00000382515 BRD4O60885 1362 aaPredicted RBP24.6■■□□□ 1.53
CD9-202ENST00000382515 ACEP12821 1306 aa24.6■■□□□ 1.53
CD9-202ENST00000382515 AHDC1Q5TGY3 1603 aaPredicted RBP24.59■■□□□ 1.53
CD9-202ENST00000382515 PPIP5K1Q6PFW1 1433 aa24.59■■□□□ 1.53
CD9-202ENST00000382515 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
CD9-202ENST00000382515 TERF2IPQ9NYB0 399 aa24.57■■□□□ 1.52
CD9-202ENST00000382515 SBNO1A3KN83 1393 aa24.56■■□□□ 1.52
CD9-202ENST00000382515 TMC1Q8TDI8 760 aa24.56■■□□□ 1.52
CD9-202ENST00000382515 JCADQ9P266 1359 aa24.55■■□□□ 1.52
CD9-202ENST00000382515 DISP3Q9P2K9 1392 aa24.55■■□□□ 1.52
CD9-202ENST00000382515 HDGFL2Q7Z4V5 671 aaPredicted RBP24.55■■□□□ 1.52
CD9-202ENST00000382515 KIF1AQ12756 1690 aa24.54■■□□□ 1.52
CD9-202ENST00000382515 USP32Q8NFA0 1604 aa24.53■■□□□ 1.52
CD9-202ENST00000382515 SLC12A5Q9H2X9 1139 aa24.53■■□□□ 1.52
CD9-202ENST00000382515 SPATA31A3Q5VYP0 1347 aa24.53■■□□□ 1.52
CD9-202ENST00000382515 XPCQ01831 940 aaPredicted RBP24.5■■□□□ 1.51
CD9-202ENST00000382515 SPATA31A6Q5VVP1 1343 aa24.5■■□□□ 1.51
CD9-202ENST00000382515 PXDNQ92626 1479 aa24.5■■□□□ 1.51
CD9-202ENST00000382515 CPSF1Q10570 1443 aaKnown RBP24.49■■□□□ 1.51
CD9-202ENST00000382515 ARHGEF10O15013 1369 aa24.48■■□□□ 1.51
CD9-202ENST00000382515 NHSL1Q5SYE7 1610 aa24.48■■□□□ 1.51
CD9-202ENST00000382515 ITSN1Q15811 1721 aa24.47■■□□□ 1.51
CD9-202ENST00000382515 PAK3O75914 559 aaPredicted RBP24.47■■□□□ 1.51
CD9-202ENST00000382515 PHLPP1O60346 1717 aa24.46■■□□□ 1.51
CD9-202ENST00000382515 TTC21AQ8NDW8 1320 aa24.45■■□□□ 1.5
CD9-202ENST00000382515 USP6P35125 1406 aa24.44■■□□□ 1.5
CD9-202ENST00000382515 KTN1Q86UP2 1357 aaKnown RBP24.44■■□□□ 1.5
CD9-202ENST00000382515 COL16A1Q07092 1604 aaPredicted RBP24.44■■□□□ 1.5
CD9-202ENST00000382515 C11orf95C9JLR9 678 aaPredicted RBP24.44■■□□□ 1.5
CD9-202ENST00000382515 TNS3Q68CZ2 1445 aa24.44■■□□□ 1.5
CD9-202ENST00000382515 PNPLA6Q8IY17 1366 aa24.43■■□□□ 1.5
CD9-202ENST00000382515 ANKRD36BQ8N2N9 1353 aa24.43■■□□□ 1.5
CD9-202ENST00000382515 LMOD2Q6P5Q4 547 aa24.43■■□□□ 1.5
CD9-202ENST00000382515 ABTB2Q8N961 1025 aa24.43■■□□□ 1.5
CD9-202ENST00000382515 RGPD8O14715 1765 aaPredicted RBP24.43■■□□□ 1.5
CD9-202ENST00000382515 NLRP13Q86W25 1043 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms