RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 A2ML1A8K2U0 1454 aa11.79□□□□□ -0.52
GPNMB-202ENST00000381990 NPC1L1Q9UHC9 1359 aa11.79□□□□□ -0.52
GPNMB-202ENST00000381990 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
GPNMB-202ENST00000381990 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
GPNMB-202ENST00000381990 INSRP06213 1382 aa11.76□□□□□ -0.53
GPNMB-202ENST00000381990 PUS7Q96PZ0 661 aaKnown RBP11.76□□□□□ -0.53
GPNMB-202ENST00000381990 ALKQ9UM73 1620 aa11.76□□□□□ -0.53
GPNMB-202ENST00000381990 RIMS2Q9UQ26 1411 aa11.75□□□□□ -0.53
GPNMB-202ENST00000381990 BACH2Q9BYV9 841 aa11.75□□□□□ -0.53
GPNMB-202ENST00000381990 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
GPNMB-202ENST00000381990 PDE4AP27815 886 aa11.74□□□□□ -0.53
GPNMB-202ENST00000381990 EVC2Q86UK5 1308 aa11.74□□□□□ -0.53
GPNMB-202ENST00000381990 TNRQ92752 1358 aa11.74□□□□□ -0.53
GPNMB-202ENST00000381990 YTHDC2Q9H6S0 1430 aaKnown RBP11.74□□□□□ -0.53
GPNMB-202ENST00000381990 TULP4Q9NRJ4 1543 aa11.73□□□□□ -0.53
GPNMB-202ENST00000381990 DDRGK1Q96HY6 314 aa11.73□□□□□ -0.53
GPNMB-202ENST00000381990 PTPRMP28827 1452 aa11.73□□□□□ -0.53
GPNMB-202ENST00000381990 PPP2R1AP30153 589 aa11.73□□□□□ -0.53
GPNMB-202ENST00000381990 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.73□□□□□ -0.53
GPNMB-202ENST00000381990 STK26Q9P289 416 aa11.73□□□□□ -0.53
GPNMB-202ENST00000381990 CARD14Q9BXL6 1004 aa11.72□□□□□ -0.53
GPNMB-202ENST00000381990 NEFMP07197 916 aa11.72□□□□□ -0.53
GPNMB-202ENST00000381990 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
GPNMB-202ENST00000381990 EXOC6Q8TAG9 804 aa11.72□□□□□ -0.53
GPNMB-202ENST00000381990 SETD1AO15047 1707 aaKnown RBP11.7□□□□□ -0.54
GPNMB-202ENST00000381990 HDGFP51858 240 aaKnown RBP11.7□□□□□ -0.54
GPNMB-202ENST00000381990 SLC12A5Q9H2X9 1139 aa11.7□□□□□ -0.54
GPNMB-202ENST00000381990 DLC1Q96QB1 1528 aa11.69□□□□□ -0.54
GPNMB-202ENST00000381990 UBR1Q8IWV7 1749 aa11.69□□□□□ -0.54
GPNMB-202ENST00000381990 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
GPNMB-202ENST00000381990 PRAM1Q96QH2 718 aa11.69□□□□□ -0.54
GPNMB-202ENST00000381990 POGKQ9P215 609 aa11.69□□□□□ -0.54
GPNMB-202ENST00000381990 USP32Q8NFA0 1604 aa11.69□□□□□ -0.54
GPNMB-202ENST00000381990 SAFB2Q14151 953 aaKnown RBP eCLIP11.68□□□□□ -0.54
GPNMB-202ENST00000381990 BLMP54132 1417 aaPredicted RBP11.68□□□□□ -0.54
GPNMB-202ENST00000381990 NSD3Q9BZ95 1437 aa11.68□□□□□ -0.54
GPNMB-202ENST00000381990 NINLQ9Y2I6 1382 aa11.68□□□□□ -0.54
GPNMB-202ENST00000381990 NLRP1Q9C000 1473 aa11.68□□□□□ -0.54
GPNMB-202ENST00000381990 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
GPNMB-202ENST00000381990 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
GPNMB-202ENST00000381990 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
GPNMB-202ENST00000381990 TMEM2Q9UHN6 1383 aa11.67□□□□□ -0.54
GPNMB-202ENST00000381990 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
GPNMB-202ENST00000381990 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
GPNMB-202ENST00000381990 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
GPNMB-202ENST00000381990 FER1L4A9Z1Z3 1794 aa11.66□□□□□ -0.54
GPNMB-202ENST00000381990 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
GPNMB-202ENST00000381990 C3P01024 1663 aa11.66□□□□□ -0.54
GPNMB-202ENST00000381990 SRPK2P78362 688 aaKnown RBP11.65□□□□□ -0.54
GPNMB-202ENST00000381990 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
GPNMB-202ENST00000381990 WDR43Q15061 677 aaKnown RBP eCLIP11.65□□□□□ -0.54
GPNMB-202ENST00000381990 LAS1LQ9Y4W2 734 aaKnown RBP11.65□□□□□ -0.54
GPNMB-202ENST00000381990 IL27Q8NEV9 243 aa11.64□□□□□ -0.55
GPNMB-202ENST00000381990 NSD2O96028 1365 aa11.64□□□□□ -0.55
GPNMB-202ENST00000381990 ADAMTS8Q9UP79 889 aa11.64□□□□□ -0.55
GPNMB-202ENST00000381990 CEBPAP49715 358 aaPredicted RBP11.63□□□□□ -0.55
GPNMB-202ENST00000381990 METP08581 1390 aa11.63□□□□□ -0.55
GPNMB-202ENST00000381990 SENP3-EIF4A1A0A087X0R7 540 aa11.63□□□□□ -0.55
GPNMB-202ENST00000381990 MORC1Q86VD1 984 aa11.63□□□□□ -0.55
GPNMB-202ENST00000381990 KNDC1Q76NI1 1749 aa11.63□□□□□ -0.55
GPNMB-202ENST00000381990 SIRT1Q96EB6 747 aa11.62□□□□□ -0.55
GPNMB-202ENST00000381990 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
GPNMB-202ENST00000381990 ANO8Q9HCE9 1232 aaPredicted RBP11.62□□□□□ -0.55
GPNMB-202ENST00000381990 TECPR2O15040 1411 aa11.62□□□□□ -0.55
GPNMB-202ENST00000381990 GSE1Q14687 1217 aa11.62□□□□□ -0.55
GPNMB-202ENST00000381990 TERF2IPQ9NYB0 399 aa11.62□□□□□ -0.55
GPNMB-202ENST00000381990 A0A1W2PP64 1363 aa11.61□□□□□ -0.55
GPNMB-202ENST00000381990 POLR3AO14802 1390 aaPredicted RBP11.61□□□□□ -0.55
GPNMB-202ENST00000381990 FAM135BQ49AJ0 1406 aa11.61□□□□□ -0.55
GPNMB-202ENST00000381990 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
GPNMB-202ENST00000381990 PLEKHG1Q9ULL1 1385 aa11.61□□□□□ -0.55
GPNMB-202ENST00000381990 PLEKHH1Q9ULM0 1364 aa11.61□□□□□ -0.55
GPNMB-202ENST00000381990 CPS1P31327 1500 aa11.6□□□□□ -0.55
GPNMB-202ENST00000381990 SLIT1O75093 1534 aa11.6□□□□□ -0.55
GPNMB-202ENST00000381990 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
GPNMB-202ENST00000381990 SALL2Q9Y467 1007 aaPredicted RBP11.6□□□□□ -0.55
GPNMB-202ENST00000381990 CD163L1Q9NR16 1453 aa11.59□□□□□ -0.55
GPNMB-202ENST00000381990 CENPQQ7L2Z9 268 aaPredicted RBP11.59□□□□□ -0.55
GPNMB-202ENST00000381990 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
GPNMB-202ENST00000381990 ARHGAP23Q9P227 1491 aa11.59□□□□□ -0.55
GPNMB-202ENST00000381990 KDM2BQ8NHM5 1336 aa11.59□□□□□ -0.55
GPNMB-202ENST00000381990 LTKP29376 864 aa11.59□□□□□ -0.55
GPNMB-202ENST00000381990 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
GPNMB-202ENST00000381990 TXNDC2Q86VQ3 553 aa11.58□□□□□ -0.56
GPNMB-202ENST00000381990 EID1Q9Y6B2 187 aa11.58□□□□□ -0.56
GPNMB-202ENST00000381990 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
GPNMB-202ENST00000381990 CRBNQ96SW2 442 aa11.58□□□□□ -0.56
GPNMB-202ENST00000381990 NFKBIBQ15653 356 aa11.57□□□□□ -0.56
GPNMB-202ENST00000381990 MED14O60244 1454 aa11.57□□□□□ -0.56
GPNMB-202ENST00000381990 ATP7BP35670 1465 aa11.57□□□□□ -0.56
GPNMB-202ENST00000381990 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-202ENST00000381990 TNNT2P45379 298 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-202ENST00000381990 THEMISQ8N1K5 641 aaPredicted RBP11.56□□□□□ -0.56
GPNMB-202ENST00000381990 CABP1Q9NZU7 370 aa11.56□□□□□ -0.56
GPNMB-202ENST00000381990 ANKRD26Q9UPS8 1709 aa11.56□□□□□ -0.56
GPNMB-202ENST00000381990 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
GPNMB-202ENST00000381990 DNAJC5Q9H3Z4 198 aa11.56□□□□□ -0.56
GPNMB-202ENST00000381990 PLPPR3Q6T4P5 718 aa11.56□□□□□ -0.56
GPNMB-202ENST00000381990 SHPRHQ149N8 1683 aa11.55□□□□□ -0.56
GPNMB-202ENST00000381990 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms